RNA–Protein interactions for RNA: ENST00000566349.5

KLHDC4-215, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 1,377 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-215ENST00000566349 NISCHQ9Y2I1 1504 aa41.29■■■■■ 4.2
KLHDC4-215ENST00000566349 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
KLHDC4-215ENST00000566349 ABCC9O60706 1549 aa35.25■■■■□ 3.23
KLHDC4-215ENST00000566349 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
KLHDC4-215ENST00000566349 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
KLHDC4-215ENST00000566349 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
KLHDC4-215ENST00000566349 NACADO15069 1562 aa34.16■■■■□ 3.06
KLHDC4-215ENST00000566349 MYO15BQ96JP2 1530 aa34.13■■■■□ 3.05
KLHDC4-215ENST00000566349 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.04
KLHDC4-215ENST00000566349 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
KLHDC4-215ENST00000566349 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
KLHDC4-215ENST00000566349 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
KLHDC4-215ENST00000566349 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
KLHDC4-215ENST00000566349 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
KLHDC4-215ENST00000566349 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
KLHDC4-215ENST00000566349 EIF4G1Q04637 1599 aaKnown RBP32.13■■■□□ 2.73
KLHDC4-215ENST00000566349 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
KLHDC4-215ENST00000566349 DNAJC5BQ9UF47 199 aa31.94■■■□□ 2.7
KLHDC4-215ENST00000566349 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
KLHDC4-215ENST00000566349 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
KLHDC4-215ENST00000566349 MROH2BQ7Z745 1585 aa31.85■■■□□ 2.69
KLHDC4-215ENST00000566349 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
KLHDC4-215ENST00000566349 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
KLHDC4-215ENST00000566349 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
KLHDC4-215ENST00000566349 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
KLHDC4-215ENST00000566349 NCAPD3P42695 1498 aa31.55■■■□□ 2.64
KLHDC4-215ENST00000566349 WIZO95785 1651 aa31.49■■■□□ 2.63
KLHDC4-215ENST00000566349 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
KLHDC4-215ENST00000566349 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
KLHDC4-215ENST00000566349 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
KLHDC4-215ENST00000566349 TOP2AP11388 1531 aaKnown RBP31.2■■■□□ 2.59
KLHDC4-215ENST00000566349 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
KLHDC4-215ENST00000566349 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
KLHDC4-215ENST00000566349 NESP48681 1621 aa30.65■■■□□ 2.5
KLHDC4-215ENST00000566349 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
KLHDC4-215ENST00000566349 CFTRP13569 1480 aa30.59■■■□□ 2.49
KLHDC4-215ENST00000566349 PDS5BQ9NTI5 1447 aa30.42■■■□□ 2.46
KLHDC4-215ENST00000566349 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
KLHDC4-215ENST00000566349 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
KLHDC4-215ENST00000566349 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
KLHDC4-215ENST00000566349 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
KLHDC4-215ENST00000566349 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
KLHDC4-215ENST00000566349 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
KLHDC4-215ENST00000566349 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
KLHDC4-215ENST00000566349 URB2Q14146 1524 aaKnown RBP29.98■■■□□ 2.39
KLHDC4-215ENST00000566349 WDR62O43379 1518 aa29.94■■■□□ 2.38
KLHDC4-215ENST00000566349 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
KLHDC4-215ENST00000566349 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
KLHDC4-215ENST00000566349 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
KLHDC4-215ENST00000566349 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
KLHDC4-215ENST00000566349 CUX1P39880 1505 aa29.84■■■□□ 2.37
KLHDC4-215ENST00000566349 CUX2O14529 1486 aa29.8■■■□□ 2.36
KLHDC4-215ENST00000566349 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
KLHDC4-215ENST00000566349 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
KLHDC4-215ENST00000566349 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
KLHDC4-215ENST00000566349 FGD5Q6ZNL6 1462 aa29.67■■■□□ 2.34
KLHDC4-215ENST00000566349 BIVM-ERCC5R4GMW8 1640 aa29.66■■■□□ 2.34
KLHDC4-215ENST00000566349 SOGA1O94964 1423 aa29.56■■■□□ 2.32
KLHDC4-215ENST00000566349 IFT140Q96RY7 1462 aa29.56■■■□□ 2.32
KLHDC4-215ENST00000566349 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
KLHDC4-215ENST00000566349 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
KLHDC4-215ENST00000566349 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
KLHDC4-215ENST00000566349 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
KLHDC4-215ENST00000566349 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
KLHDC4-215ENST00000566349 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
KLHDC4-215ENST00000566349 TDRD9Q8NDG6 1382 aaKnown RBP29.35■■■□□ 2.29
KLHDC4-215ENST00000566349 WDR97A6NE52 1622 aa29.33■■■□□ 2.29
KLHDC4-215ENST00000566349 AQRO60306 1485 aaKnown RBP eCLIP29.31■■■□□ 2.283e-9■■□□□ 14.2
KLHDC4-215ENST00000566349 EIF4G3O43432 1585 aaKnown RBP29.27■■■□□ 2.28
KLHDC4-215ENST00000566349 GAPVD1Q14C86 1478 aa29.22■■■□□ 2.27
KLHDC4-215ENST00000566349 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
KLHDC4-215ENST00000566349 KIF27Q86VH2 1401 aa29.18■■■□□ 2.26
KLHDC4-215ENST00000566349 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
KLHDC4-215ENST00000566349 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
KLHDC4-215ENST00000566349 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
KLHDC4-215ENST00000566349 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
KLHDC4-215ENST00000566349 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
KLHDC4-215ENST00000566349 IGF1RP08069 1367 aa29.02■■■□□ 2.24
KLHDC4-215ENST00000566349 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
KLHDC4-215ENST00000566349 EEA1Q15075 1411 aa28.95■■■□□ 2.22
KLHDC4-215ENST00000566349 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
KLHDC4-215ENST00000566349 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
KLHDC4-215ENST00000566349 FHAD1B1AJZ9 1412 aa28.9■■■□□ 2.22
KLHDC4-215ENST00000566349 SYNJ2O15056 1496 aa28.89■■■□□ 2.21
KLHDC4-215ENST00000566349 FBLN2P98095 1184 aa28.88■■■□□ 2.21
KLHDC4-215ENST00000566349 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
KLHDC4-215ENST00000566349 CSRNP3Q8WYN3 585 aa28.87■■■□□ 2.21
KLHDC4-215ENST00000566349 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
KLHDC4-215ENST00000566349 CUL7Q14999 1698 aa28.84■■■□□ 2.21
KLHDC4-215ENST00000566349 GRIN2AQ12879 1464 aa28.77■■■□□ 2.2
KLHDC4-215ENST00000566349 CHD1O14646 1710 aa28.77■■■□□ 2.2
KLHDC4-215ENST00000566349 PRXQ9BXM0 1461 aa28.76■■■□□ 2.19
KLHDC4-215ENST00000566349 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
KLHDC4-215ENST00000566349 OSCARQ8IYS5 282 aa28.7■■■□□ 2.18
KLHDC4-215ENST00000566349 NUP160Q12769 1436 aa28.62■■■□□ 2.17
KLHDC4-215ENST00000566349 CEP170Q5SW79 1584 aa28.59■■■□□ 2.17
KLHDC4-215ENST00000566349 KIF21BO75037 1637 aa28.59■■■□□ 2.17
KLHDC4-215ENST00000566349 CLASP1Q7Z460 1538 aa28.51■■■□□ 2.16
KLHDC4-215ENST00000566349 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
KLHDC4-215ENST00000566349 GOLGA3Q08378 1498 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms