RNA–Protein interactions for RNA: ENST00000569930.1

TSC2-226, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 2,621 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-226ENST00000569930 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
TSC2-226ENST00000569930 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
TSC2-226ENST00000569930 ZCCHC6Q5VYS8 1495 aaKnown RBP31.93■■■□□ 2.7
TSC2-226ENST00000569930 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
TSC2-226ENST00000569930 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
TSC2-226ENST00000569930 ABCC9O60706 1549 aa31.67■■■□□ 2.66
TSC2-226ENST00000569930 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
TSC2-226ENST00000569930 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
TSC2-226ENST00000569930 HRCP23327 699 aa31.3■■■□□ 2.6
TSC2-226ENST00000569930 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
TSC2-226ENST00000569930 NACADO15069 1562 aa31■■■□□ 2.55
TSC2-226ENST00000569930 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
TSC2-226ENST00000569930 PCGF6Q9BYE7 350 aa30.84■■■□□ 2.53
TSC2-226ENST00000569930 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
TSC2-226ENST00000569930 PPARGC1BQ86YN6 1023 aaKnown RBP30.69■■■□□ 2.5
TSC2-226ENST00000569930 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
TSC2-226ENST00000569930 LOC105371045A0A1W2PR82 267 aa30.16■■■□□ 2.42
TSC2-226ENST00000569930 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
TSC2-226ENST00000569930 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.39
TSC2-226ENST00000569930 PABPN1Q86U42 306 aaKnown RBP eCLIP29.93■■■□□ 2.388e-7■■■□□ 18.8
TSC2-226ENST00000569930 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
TSC2-226ENST00000569930 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
TSC2-226ENST00000569930 ZEB1P37275 1124 aaPredicted RBP29.56■■■□□ 2.32
TSC2-226ENST00000569930 PELP1Q8IZL8 1130 aaKnown RBP29.55■■■□□ 2.32
TSC2-226ENST00000569930 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
TSC2-226ENST00000569930 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
TSC2-226ENST00000569930 BAZ1AQ9NRL2 1556 aaPredicted RBP29.42■■■□□ 2.3
TSC2-226ENST00000569930 SCAF1Q9H7N4 1312 aaKnown RBP29.41■■■□□ 2.3
TSC2-226ENST00000569930 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
TSC2-226ENST00000569930 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
TSC2-226ENST00000569930 WIZO95785 1651 aa29.16■■■□□ 2.26
TSC2-226ENST00000569930 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
TSC2-226ENST00000569930 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
TSC2-226ENST00000569930 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
TSC2-226ENST00000569930 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
TSC2-226ENST00000569930 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
TSC2-226ENST00000569930 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
TSC2-226ENST00000569930 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
TSC2-226ENST00000569930 ACIN1Q9UKV3 1341 aaKnown RBP28.8■■■□□ 2.2
TSC2-226ENST00000569930 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
TSC2-226ENST00000569930 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
TSC2-226ENST00000569930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.73■■■□□ 2.19
TSC2-226ENST00000569930 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
TSC2-226ENST00000569930 CCER1Q8TC90 406 aaPredicted RBP28.64■■■□□ 2.17
TSC2-226ENST00000569930 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
TSC2-226ENST00000569930 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
TSC2-226ENST00000569930 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
TSC2-226ENST00000569930 GTF3C3Q9Y5Q9 886 aa28.54■■■□□ 2.16
TSC2-226ENST00000569930 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.15
TSC2-226ENST00000569930 CENPBP07199 599 aaPredicted RBP28.44■■■□□ 2.14
TSC2-226ENST00000569930 MYT1Q01538 1121 aa28.25■■■□□ 2.11
TSC2-226ENST00000569930 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
TSC2-226ENST00000569930 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
TSC2-226ENST00000569930 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
TSC2-226ENST00000569930 ZNF316A6NFI3 1004 aaPredicted RBP28.06■■■□□ 2.08
TSC2-226ENST00000569930 CEP162Q5TB80 1403 aa28.02■■■□□ 2.08
TSC2-226ENST00000569930 YTHDC1Q96MU7 727 aaKnown RBP27.99■■■□□ 2.07
TSC2-226ENST00000569930 CFTRP13569 1480 aa27.98■■■□□ 2.07
TSC2-226ENST00000569930 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
TSC2-226ENST00000569930 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
TSC2-226ENST00000569930 TNIKQ9UKE5 1360 aa27.87■■■□□ 2.05
TSC2-226ENST00000569930 MIER1Q8N108 512 aa27.84■■■□□ 2.05
TSC2-226ENST00000569930 SOGA1O94964 1423 aa27.84■■■□□ 2.05
TSC2-226ENST00000569930 NESP48681 1621 aa27.74■■■□□ 2.03
TSC2-226ENST00000569930 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
TSC2-226ENST00000569930 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
TSC2-226ENST00000569930 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
TSC2-226ENST00000569930 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
TSC2-226ENST00000569930 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
TSC2-226ENST00000569930 HNRNPUL2Q1KMD3 747 aaKnown RBP27.64■■■□□ 2.02
TSC2-226ENST00000569930 SYNJ1O43426 1573 aa27.64■■■□□ 2.02
TSC2-226ENST00000569930 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
TSC2-226ENST00000569930 EEA1Q15075 1411 aa27.62■■■□□ 2.01
TSC2-226ENST00000569930 GOLGA3Q08378 1498 aa27.56■■■□□ 2
TSC2-226ENST00000569930 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
TSC2-226ENST00000569930 TOP2BQ02880 1626 aa27.53■■■□□ 2
TSC2-226ENST00000569930 CUX1P39880 1505 aa27.52■■■□□ 2
TSC2-226ENST00000569930 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
TSC2-226ENST00000569930 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
TSC2-226ENST00000569930 CLIP1P30622 1438 aa27.33■■□□□ 1.97
TSC2-226ENST00000569930 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
TSC2-226ENST00000569930 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
TSC2-226ENST00000569930 TOPBP1Q92547 1522 aa27.29■■□□□ 1.96
TSC2-226ENST00000569930 VPS8Q8N3P4 1428 aa27.28■■□□□ 1.96
TSC2-226ENST00000569930 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
TSC2-226ENST00000569930 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
TSC2-226ENST00000569930 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
TSC2-226ENST00000569930 KIF21BO75037 1637 aa27.24■■□□□ 1.95
TSC2-226ENST00000569930 APLP2Q06481 763 aa27.22■■□□□ 1.95
TSC2-226ENST00000569930 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
TSC2-226ENST00000569930 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
TSC2-226ENST00000569930 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
TSC2-226ENST00000569930 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
TSC2-226ENST00000569930 MRC2Q9UBG0 1479 aa27.14■■□□□ 1.94
TSC2-226ENST00000569930 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
TSC2-226ENST00000569930 DHX57Q6P158 1386 aaKnown RBP27.12■■□□□ 1.93
TSC2-226ENST00000569930 CUX2O14529 1486 aa27.11■■□□□ 1.93
TSC2-226ENST00000569930 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
TSC2-226ENST00000569930 RAPGEF2Q9Y4G8 1499 aa27.09■■□□□ 1.93
TSC2-226ENST00000569930 TSHZ2Q9NRE2 1034 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms