RNA–Protein interactions for RNA: ENST00000227163.8

SPI1-201, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPI1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-201ENST00000227163 NISCHQ9Y2I1 1504 aa53.51■■■■■ 6.16
SPI1-201ENST00000227163 CCDC180Q9P1Z9 1646 aa48.1■■■■■ 5.29
SPI1-201ENST00000227163 ABCC9O60706 1549 aa47.91■■■■■ 5.26
SPI1-201ENST00000227163 RB1CC1Q8TDY2 1594 aa45.72■■■■■ 4.91
SPI1-201ENST00000227163 NACADO15069 1562 aa45.4■■■■■ 4.86
SPI1-201ENST00000227163 DCAF8L2P0C7V8 631 aa45.07■■■■■ 4.81
SPI1-201ENST00000227163 MYO15BQ96JP2 1530 aa44.77■■■■■ 4.76
SPI1-201ENST00000227163 DNAJC5BQ9UF47 199 aa44.65■■■■■ 4.74
SPI1-201ENST00000227163 UNC13AQ9UPW8 1703 aa44.64■■■■■ 4.74
SPI1-201ENST00000227163 PABPN1Q86U42 306 aaKnown RBP eCLIP44.53■■■■■ 4.72
SPI1-201ENST00000227163 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
SPI1-201ENST00000227163 BICRAQ9NZM4 1560 aa44.28■■■■■ 4.68
SPI1-201ENST00000227163 DCAF1Q9Y4B6 1507 aa44.24■■■■■ 4.67
SPI1-201ENST00000227163 SHROOM4Q9ULL8 1493 aa43.84■■■■■ 4.61
SPI1-201ENST00000227163 SCRIBQ14160 1630 aa43.82■■■■■ 4.61
SPI1-201ENST00000227163 CC2D2AQ9P2K1 1620 aa43.31■■■■■ 4.52
SPI1-201ENST00000227163 EIF4G1Q04637 1599 aaKnown RBP43.25■■■■■ 4.51
SPI1-201ENST00000227163 CECR2Q9BXF3 1484 aa43.18■■■■■ 4.5
SPI1-201ENST00000227163 NCAPD3P42695 1498 aa41.83■■■■■ 4.29
SPI1-201ENST00000227163 SMARCA4P51532 1647 aa41.79■■■■■ 4.28
SPI1-201ENST00000227163 ATAD2BQ9ULI0 1458 aa41.73■■■■■ 4.27
SPI1-201ENST00000227163 SMARCA2P51531 1590 aa41.72■■■■■ 4.27
SPI1-201ENST00000227163 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
SPI1-201ENST00000227163 BAZ1AQ9NRL2 1556 aaPredicted RBP41.6■■■■■ 4.25
SPI1-201ENST00000227163 ERCC6Q03468 1493 aa41.47■■■■■ 4.23
SPI1-201ENST00000227163 BAZ1BQ9UIG0 1483 aaKnown RBP41.42■■■■■ 4.22
SPI1-201ENST00000227163 PEG3Q9GZU2 1588 aa41.34■■■■■ 4.21
SPI1-201ENST00000227163 CUX2O14529 1486 aa41.32■■■■■ 4.2
SPI1-201ENST00000227163 MROH2BQ7Z745 1585 aa41.2■■■■■ 4.19
SPI1-201ENST00000227163 NESP48681 1621 aa41.15■■■■■ 4.18
SPI1-201ENST00000227163 DNAJC5Q9H3Z4 198 aa41.02■■■■■ 4.16
SPI1-201ENST00000227163 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
SPI1-201ENST00000227163 THOC2Q8NI27 1593 aaKnown RBP40.81■■■■■ 4.12
SPI1-201ENST00000227163 WIZO95785 1651 aa40.75■■■■■ 4.11
SPI1-201ENST00000227163 KIF21AQ7Z4S6 1674 aa40.72■■■■■ 4.11
SPI1-201ENST00000227163 PDS5BQ9NTI5 1447 aa40.71■■■■■ 4.11
SPI1-201ENST00000227163 CADPSQ9ULU8 1353 aa40.57■■■■■ 4.08
SPI1-201ENST00000227163 MRC2Q9UBG0 1479 aa40.38■■■■■ 4.05
SPI1-201ENST00000227163 RSF1Q96T23 1441 aaPredicted RBP40.36■■■■■ 4.05
SPI1-201ENST00000227163 TOP2AP11388 1531 aaKnown RBP40.31■■■■■ 4.04
SPI1-201ENST00000227163 WDR62O43379 1518 aa40.27■■■■■ 4.04
SPI1-201ENST00000227163 CEP164Q9UPV0 1460 aa40.26■■■■■ 4.03
SPI1-201ENST00000227163 FANCD2Q9BXW9 1451 aa40.17■■■■■ 4.02
SPI1-201ENST00000227163 CFTRP13569 1480 aa40.14■■■■■ 4.02
SPI1-201ENST00000227163 PRDM2Q13029 1718 aa39.88■■■■□ 3.98
SPI1-201ENST00000227163 URB2Q14146 1524 aaKnown RBP39.8■■■■□ 3.96
SPI1-201ENST00000227163 CCDC88BA6NC98 1476 aa39.74■■■■□ 3.95
SPI1-201ENST00000227163 IFT140Q96RY7 1462 aa39.41■■■■□ 3.9
SPI1-201ENST00000227163 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
SPI1-201ENST00000227163 TRIM41Q8WV44 630 aa39.36■■■■□ 3.89
SPI1-201ENST00000227163 ABCC8Q09428 1581 aa39.35■■■■□ 3.89
SPI1-201ENST00000227163 OSCARQ8IYS5 282 aa39.33■■■■□ 3.89
SPI1-201ENST00000227163 DNMBPQ6XZF7 1577 aa39.33■■■■□ 3.89
SPI1-201ENST00000227163 ZNF608Q9ULD9 1512 aaPredicted RBP39.28■■■■□ 3.88
SPI1-201ENST00000227163 EIF4G3O43432 1585 aaKnown RBP39.18■■■■□ 3.86
SPI1-201ENST00000227163 TARBP1Q13395 1621 aaKnown RBP39.04■■■■□ 3.84
SPI1-201ENST00000227163 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
SPI1-201ENST00000227163 RIMBP3CA6NJZ7 1639 aa38.91■■■■□ 3.82
SPI1-201ENST00000227163 RIMBP3BA6NNM3 1639 aa38.91■■■■□ 3.82
SPI1-201ENST00000227163 RIMBP3Q9UFD9 1639 aa38.91■■■■□ 3.82
SPI1-201ENST00000227163 AQRO60306 1485 aaKnown RBP eCLIP38.91■■■■□ 3.826e-6■■■■□ 25.1
SPI1-201ENST00000227163 CHD1O14646 1710 aa38.86■■■■□ 3.81
SPI1-201ENST00000227163 RAD54L2Q9Y4B4 1467 aa38.82■■■■□ 3.81
SPI1-201ENST00000227163 ARHGEF11O15085 1522 aa38.8■■■■□ 3.8
SPI1-201ENST00000227163 FGD5Q6ZNL6 1462 aa38.79■■■■□ 3.8
SPI1-201ENST00000227163 SOGA1O94964 1423 aa38.79■■■■□ 3.8
SPI1-201ENST00000227163 WDR97A6NE52 1622 aa38.75■■■■□ 3.79
SPI1-201ENST00000227163 CUX1P39880 1505 aa38.75■■■■□ 3.79
SPI1-201ENST00000227163 TDRD9Q8NDG6 1382 aaKnown RBP38.69■■■■□ 3.78
SPI1-201ENST00000227163 FBLN2P98095 1184 aa38.68■■■■□ 3.78
SPI1-201ENST00000227163 SUPT5HO00267 1087 aaKnown RBP38.63■■■■□ 3.77
SPI1-201ENST00000227163 SNAPC4Q5SXM2 1469 aa38.61■■■■□ 3.77
SPI1-201ENST00000227163 MAGI1Q96QZ7 1491 aaPredicted RBP38.53■■■■□ 3.76
SPI1-201ENST00000227163 GRIN2BQ13224 1484 aa38.51■■■■□ 3.76
SPI1-201ENST00000227163 SYNJ1O43426 1573 aa38.43■■■■□ 3.74
SPI1-201ENST00000227163 PBRM1Q86U86 1689 aa38.43■■■■□ 3.74
SPI1-201ENST00000227163 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
SPI1-201ENST00000227163 CYB5RLQ6IPT4 315 aa38.4■■■■□ 3.74
SPI1-201ENST00000227163 CHMP7Q8WUX9 453 aaPredicted RBP38.4■■■■□ 3.74
SPI1-201ENST00000227163 SYNJ2O15056 1496 aa38.38■■■■□ 3.73
SPI1-201ENST00000227163 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.73
SPI1-201ENST00000227163 GAPVD1Q14C86 1478 aa38.37■■■■□ 3.73
SPI1-201ENST00000227163 ABCA10Q8WWZ4 1543 aa38.35■■■■□ 3.73
SPI1-201ENST00000227163 ABCA5Q8WWZ7 1642 aa38.33■■■■□ 3.73
SPI1-201ENST00000227163 WRNQ14191 1432 aaPredicted RBP eCLIP38.22■■■■□ 3.71
SPI1-201ENST00000227163 BIVM-ERCC5R4GMW8 1640 aa38.2■■■■□ 3.7
SPI1-201ENST00000227163 TOP2BQ02880 1626 aa38.19■■■■□ 3.7
SPI1-201ENST00000227163 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
SPI1-201ENST00000227163 GRIN2AQ12879 1464 aa38.02■■■■□ 3.68
SPI1-201ENST00000227163 TRHP20396 242 aaPredicted RBP38.01■■■■□ 3.68
SPI1-201ENST00000227163 ERICH3Q5RHP9 1530 aa37.9■■■■□ 3.66
SPI1-201ENST00000227163 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
SPI1-201ENST00000227163 CEP170Q5SW79 1584 aa37.86■■■■□ 3.65
SPI1-201ENST00000227163 NUP160Q12769 1436 aa37.86■■■■□ 3.65
SPI1-201ENST00000227163 ERCC6L2Q5T890 1561 aa37.72■■■■□ 3.63
SPI1-201ENST00000227163 SHROOM2Q13796 1616 aa37.71■■■■□ 3.63
SPI1-201ENST00000227163 RUSC2Q8N2Y8 1516 aa37.53■■■■□ 3.6
SPI1-201ENST00000227163 PRG4Q92954 1404 aaPredicted RBP37.48■■■■□ 3.59
SPI1-201ENST00000227163 KIF27Q86VH2 1401 aa37.44■■■■□ 3.58
SPI1-201ENST00000227163 CUL7Q14999 1698 aa37.43■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms