RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
NFIC-208ENST00000589537 CCDC180Q9P1Z9 1646 aa36.61■■■■□ 3.45
NFIC-208ENST00000589537 ABCC9O60706 1549 aa36.03■■■■□ 3.36
NFIC-208ENST00000589537 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
NFIC-208ENST00000589537 NACADO15069 1562 aa34.5■■■■□ 3.11
NFIC-208ENST00000589537 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
NFIC-208ENST00000589537 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
NFIC-208ENST00000589537 ZCCHC6Q5VYS8 1495 aaKnown RBP34.04■■■■□ 3.04
NFIC-208ENST00000589537 DCAF1Q9Y4B6 1507 aa33.93■■■■□ 3.02
NFIC-208ENST00000589537 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.99
NFIC-208ENST00000589537 PABPN1Q86U42 306 aaKnown RBP eCLIP33.56■■■□□ 2.96
NFIC-208ENST00000589537 BICRAQ9NZM4 1560 aa33.49■■■□□ 2.95
NFIC-208ENST00000589537 DNAJC5BQ9UF47 199 aa33.3■■■□□ 2.92
NFIC-208ENST00000589537 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
NFIC-208ENST00000589537 SCRIBQ14160 1630 aa33.27■■■□□ 2.92
NFIC-208ENST00000589537 EIF4G1Q04637 1599 aaKnown RBP32.68■■■□□ 2.82
NFIC-208ENST00000589537 CC2D2AQ9P2K1 1620 aa32.61■■■□□ 2.81
NFIC-208ENST00000589537 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
NFIC-208ENST00000589537 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
NFIC-208ENST00000589537 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
NFIC-208ENST00000589537 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
NFIC-208ENST00000589537 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
NFIC-208ENST00000589537 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
NFIC-208ENST00000589537 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
NFIC-208ENST00000589537 PEG3Q9GZU2 1588 aa31.57■■■□□ 2.64
NFIC-208ENST00000589537 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
NFIC-208ENST00000589537 BAZ1BQ9UIG0 1483 aaKnown RBP31.49■■■□□ 2.63
NFIC-208ENST00000589537 ERCC6Q03468 1493 aa31.15■■■□□ 2.58
NFIC-208ENST00000589537 WIZO95785 1651 aa31.11■■■□□ 2.57
NFIC-208ENST00000589537 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
NFIC-208ENST00000589537 NESP48681 1621 aa31.05■■■□□ 2.56
NFIC-208ENST00000589537 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
NFIC-208ENST00000589537 CUX2O14529 1486 aa31.01■■■□□ 2.55
NFIC-208ENST00000589537 PDS5BQ9NTI5 1447 aa30.86■■■□□ 2.53
NFIC-208ENST00000589537 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
NFIC-208ENST00000589537 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
NFIC-208ENST00000589537 THOC2Q8NI27 1593 aaKnown RBP30.73■■■□□ 2.51
NFIC-208ENST00000589537 KIF21AQ7Z4S6 1674 aa30.7■■■□□ 2.5
NFIC-208ENST00000589537 CFTRP13569 1480 aa30.61■■■□□ 2.49
NFIC-208ENST00000589537 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
NFIC-208ENST00000589537 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
NFIC-208ENST00000589537 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
NFIC-208ENST00000589537 WDR62O43379 1518 aa30.45■■■□□ 2.47
NFIC-208ENST00000589537 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
NFIC-208ENST00000589537 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
NFIC-208ENST00000589537 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
NFIC-208ENST00000589537 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
NFIC-208ENST00000589537 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
NFIC-208ENST00000589537 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
NFIC-208ENST00000589537 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
NFIC-208ENST00000589537 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
NFIC-208ENST00000589537 IFT140Q96RY7 1462 aa29.9■■■□□ 2.38
NFIC-208ENST00000589537 ZNF608Q9ULD9 1512 aaPredicted RBP29.7■■■□□ 2.34
NFIC-208ENST00000589537 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
NFIC-208ENST00000589537 TARBP1Q13395 1621 aaKnown RBP29.65■■■□□ 2.34
NFIC-208ENST00000589537 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
NFIC-208ENST00000589537 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
NFIC-208ENST00000589537 CUX1P39880 1505 aa29.57■■■□□ 2.32
NFIC-208ENST00000589537 SOGA1O94964 1423 aa29.55■■■□□ 2.32
NFIC-208ENST00000589537 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
NFIC-208ENST00000589537 WDR97A6NE52 1622 aa29.52■■■□□ 2.32
NFIC-208ENST00000589537 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
NFIC-208ENST00000589537 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.312e-7■■■■□ 24.8
NFIC-208ENST00000589537 TDRD9Q8NDG6 1382 aaKnown RBP29.38■■■□□ 2.29
NFIC-208ENST00000589537 ABCA10Q8WWZ4 1543 aa29.29■■■□□ 2.28
NFIC-208ENST00000589537 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
NFIC-208ENST00000589537 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
NFIC-208ENST00000589537 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
NFIC-208ENST00000589537 CHD1O14646 1710 aa29.27■■■□□ 2.28
NFIC-208ENST00000589537 MAGI1Q96QZ7 1491 aaPredicted RBP29.27■■■□□ 2.28
NFIC-208ENST00000589537 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
NFIC-208ENST00000589537 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
NFIC-208ENST00000589537 GAPVD1Q14C86 1478 aa29.22■■■□□ 2.27
NFIC-208ENST00000589537 FBLN2P98095 1184 aa29.21■■■□□ 2.27
NFIC-208ENST00000589537 ABCA5Q8WWZ7 1642 aa29.19■■■□□ 2.26
NFIC-208ENST00000589537 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
NFIC-208ENST00000589537 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
NFIC-208ENST00000589537 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
NFIC-208ENST00000589537 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
NFIC-208ENST00000589537 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
NFIC-208ENST00000589537 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
NFIC-208ENST00000589537 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
NFIC-208ENST00000589537 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
NFIC-208ENST00000589537 ARHGEF11O15085 1522 aa29.11■■■□□ 2.25
NFIC-208ENST00000589537 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
NFIC-208ENST00000589537 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
NFIC-208ENST00000589537 ADAMTS12P58397 1594 aa28.93■■■□□ 2.22
NFIC-208ENST00000589537 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
NFIC-208ENST00000589537 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
NFIC-208ENST00000589537 ARAP1Q96P48 1450 aa28.84■■■□□ 2.21
NFIC-208ENST00000589537 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
NFIC-208ENST00000589537 NUP160Q12769 1436 aa28.78■■■□□ 2.2
NFIC-208ENST00000589537 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
NFIC-208ENST00000589537 CEP170Q5SW79 1584 aa28.72■■■□□ 2.19
NFIC-208ENST00000589537 CUL7Q14999 1698 aa28.61■■■□□ 2.17
NFIC-208ENST00000589537 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
NFIC-208ENST00000589537 IGF1RP08069 1367 aa28.6■■■□□ 2.17
NFIC-208ENST00000589537 RUSC2Q8N2Y8 1516 aa28.52■■■□□ 2.16
NFIC-208ENST00000589537 ERCC6L2Q5T890 1561 aa28.48■■■□□ 2.15
NFIC-208ENST00000589537 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms