RNA–Protein interactions for RNA: ENST00000476881.2

LRCH4-204, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 1,675 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-204ENST00000476881 NISCHQ9Y2I1 1504 aa47.97■■■■■ 5.27
LRCH4-204ENST00000476881 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
LRCH4-204ENST00000476881 ABCC9O60706 1549 aa41.46■■■■■ 4.23
LRCH4-204ENST00000476881 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
LRCH4-204ENST00000476881 ZCCHC6Q5VYS8 1495 aaKnown RBP40.04■■■■■ 4
LRCH4-204ENST00000476881 NACADO15069 1562 aa39.95■■■■□ 3.99
LRCH4-204ENST00000476881 RB1CC1Q8TDY2 1594 aa39.95■■■■□ 3.99
LRCH4-204ENST00000476881 MYO15BQ96JP2 1530 aa39.76■■■■□ 3.96
LRCH4-204ENST00000476881 DCAF1Q9Y4B6 1507 aa39.68■■■■□ 3.94
LRCH4-204ENST00000476881 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
LRCH4-204ENST00000476881 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
LRCH4-204ENST00000476881 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
LRCH4-204ENST00000476881 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
LRCH4-204ENST00000476881 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
LRCH4-204ENST00000476881 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
LRCH4-204ENST00000476881 EIF4G1Q04637 1599 aaKnown RBP37.71■■■■□ 3.63
LRCH4-204ENST00000476881 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.59
LRCH4-204ENST00000476881 CECR2Q9BXF3 1484 aa37.37■■■■□ 3.57
LRCH4-204ENST00000476881 SMARCA4P51532 1647 aa37.18■■■■□ 3.54
LRCH4-204ENST00000476881 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
LRCH4-204ENST00000476881 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
LRCH4-204ENST00000476881 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
LRCH4-204ENST00000476881 SMARCA2P51531 1590 aa36.89■■■■□ 3.5
LRCH4-204ENST00000476881 NCAPD3P42695 1498 aa36.86■■■■□ 3.49
LRCH4-204ENST00000476881 PEG3Q9GZU2 1588 aa36.8■■■■□ 3.48
LRCH4-204ENST00000476881 RSF1Q96T23 1441 aaPredicted RBP36.76■■■■□ 3.48
LRCH4-204ENST00000476881 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
LRCH4-204ENST00000476881 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
LRCH4-204ENST00000476881 WIZO95785 1651 aa36.63■■■■□ 3.45
LRCH4-204ENST00000476881 SUPT5HO00267 1087 aaKnown RBP36.37■■■■□ 3.41
LRCH4-204ENST00000476881 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
LRCH4-204ENST00000476881 NESP48681 1621 aa35.94■■■■□ 3.34
LRCH4-204ENST00000476881 LAMC3Q9Y6N6 1575 aa35.86■■■■□ 3.33
LRCH4-204ENST00000476881 CADPSQ9ULU8 1353 aa35.81■■■■□ 3.32
LRCH4-204ENST00000476881 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
LRCH4-204ENST00000476881 ERCC6Q03468 1493 aa35.72■■■■□ 3.31
LRCH4-204ENST00000476881 CFTRP13569 1480 aa35.64■■■■□ 3.3
LRCH4-204ENST00000476881 PDS5BQ9NTI5 1447 aa35.62■■■■□ 3.29
LRCH4-204ENST00000476881 KIF21AQ7Z4S6 1674 aa35.54■■■■□ 3.28
LRCH4-204ENST00000476881 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
LRCH4-204ENST00000476881 FANCD2Q9BXW9 1451 aa35.4■■■■□ 3.26
LRCH4-204ENST00000476881 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
LRCH4-204ENST00000476881 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
LRCH4-204ENST00000476881 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
LRCH4-204ENST00000476881 CUX2O14529 1486 aa35.22■■■■□ 3.23
LRCH4-204ENST00000476881 WDR62O43379 1518 aa35.1■■■■□ 3.21
LRCH4-204ENST00000476881 URB2Q14146 1524 aaKnown RBP35.03■■■■□ 3.2
LRCH4-204ENST00000476881 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
LRCH4-204ENST00000476881 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
LRCH4-204ENST00000476881 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
LRCH4-204ENST00000476881 CUX1P39880 1505 aa34.68■■■■□ 3.14
LRCH4-204ENST00000476881 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
LRCH4-204ENST00000476881 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
LRCH4-204ENST00000476881 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
LRCH4-204ENST00000476881 FGD5Q6ZNL6 1462 aa34.53■■■■□ 3.12
LRCH4-204ENST00000476881 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
LRCH4-204ENST00000476881 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
LRCH4-204ENST00000476881 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
LRCH4-204ENST00000476881 TARBP1Q13395 1621 aaKnown RBP34.46■■■■□ 3.11
LRCH4-204ENST00000476881 SOGA1O94964 1423 aa34.46■■■■□ 3.11
LRCH4-204ENST00000476881 RAD54L2Q9Y4B4 1467 aa34.45■■■■□ 3.1
LRCH4-204ENST00000476881 ZNF608Q9ULD9 1512 aaPredicted RBP34.42■■■■□ 3.1
LRCH4-204ENST00000476881 CHIC1Q5VXU3 224 aa34.32■■■■□ 3.08
LRCH4-204ENST00000476881 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
LRCH4-204ENST00000476881 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
LRCH4-204ENST00000476881 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.084e-9■■■□□ 16.6
LRCH4-204ENST00000476881 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
LRCH4-204ENST00000476881 WDR97A6NE52 1622 aa34.24■■■■□ 3.07
LRCH4-204ENST00000476881 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.07
LRCH4-204ENST00000476881 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
LRCH4-204ENST00000476881 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
LRCH4-204ENST00000476881 GRIN2BQ13224 1484 aa34■■■■□ 3.03
LRCH4-204ENST00000476881 PBRM1Q86U86 1689 aa33.99■■■■□ 3.03
LRCH4-204ENST00000476881 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
LRCH4-204ENST00000476881 DNAJC5Q9H3Z4 198 aa33.93■■■■□ 3.02
LRCH4-204ENST00000476881 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
LRCH4-204ENST00000476881 KIF27Q86VH2 1401 aa33.86■■■■□ 3.01
LRCH4-204ENST00000476881 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
LRCH4-204ENST00000476881 CHD1O14646 1710 aa33.85■■■■□ 3.01
LRCH4-204ENST00000476881 FBLN2P98095 1184 aa33.85■■■■□ 3.01
LRCH4-204ENST00000476881 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
LRCH4-204ENST00000476881 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
LRCH4-204ENST00000476881 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
LRCH4-204ENST00000476881 SYNJ2O15056 1496 aa33.77■■■■□ 3
LRCH4-204ENST00000476881 ADAMTS12P58397 1594 aa33.7■■■□□ 2.99
LRCH4-204ENST00000476881 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
LRCH4-204ENST00000476881 IGF1RP08069 1367 aa33.65■■■□□ 2.98
LRCH4-204ENST00000476881 EEA1Q15075 1411 aa33.63■■■□□ 2.97
LRCH4-204ENST00000476881 FAM9AQ8IZU1 332 aaPredicted RBP33.6■■■□□ 2.97
LRCH4-204ENST00000476881 GRIN2AQ12879 1464 aa33.57■■■□□ 2.96
LRCH4-204ENST00000476881 CUL7Q14999 1698 aa33.54■■■□□ 2.96
LRCH4-204ENST00000476881 CSRNP3Q8WYN3 585 aa33.53■■■□□ 2.96
LRCH4-204ENST00000476881 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
LRCH4-204ENST00000476881 CLASP1Q7Z460 1538 aa33.44■■■□□ 2.94
LRCH4-204ENST00000476881 NUP160Q12769 1436 aa33.41■■■□□ 2.94
LRCH4-204ENST00000476881 CEP170Q5SW79 1584 aa33.4■■■□□ 2.94
LRCH4-204ENST00000476881 PRXQ9BXM0 1461 aa33.38■■■□□ 2.93
LRCH4-204ENST00000476881 RAPGEF2Q9Y4G8 1499 aa33.33■■■□□ 2.93
LRCH4-204ENST00000476881 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
LRCH4-204ENST00000476881 RIMBP3CA6NJZ7 1639 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms