RNA–Protein interactions for RNA: ENST00000589164.1

NFIC-207, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-207ENST00000589164 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
NFIC-207ENST00000589164 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
NFIC-207ENST00000589164 ABCC9O60706 1549 aa27.2■■□□□ 1.94
NFIC-207ENST00000589164 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
NFIC-207ENST00000589164 NACADO15069 1562 aa25.95■■□□□ 1.75
NFIC-207ENST00000589164 DCAF8L2P0C7V8 631 aa25.88■■□□□ 1.73
NFIC-207ENST00000589164 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
NFIC-207ENST00000589164 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
NFIC-207ENST00000589164 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
NFIC-207ENST00000589164 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
NFIC-207ENST00000589164 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
NFIC-207ENST00000589164 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
NFIC-207ENST00000589164 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
NFIC-207ENST00000589164 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
NFIC-207ENST00000589164 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
NFIC-207ENST00000589164 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
NFIC-207ENST00000589164 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
NFIC-207ENST00000589164 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
NFIC-207ENST00000589164 NCAPD3P42695 1498 aa24.06■■□□□ 1.44
NFIC-207ENST00000589164 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
NFIC-207ENST00000589164 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
NFIC-207ENST00000589164 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
NFIC-207ENST00000589164 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
NFIC-207ENST00000589164 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
NFIC-207ENST00000589164 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
NFIC-207ENST00000589164 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
NFIC-207ENST00000589164 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
NFIC-207ENST00000589164 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
NFIC-207ENST00000589164 NESP48681 1621 aa23.44■■□□□ 1.34
NFIC-207ENST00000589164 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
NFIC-207ENST00000589164 CUX2O14529 1486 aa23.4■■□□□ 1.34
NFIC-207ENST00000589164 LAMC3Q9Y6N6 1575 aa23.33■■□□□ 1.33
NFIC-207ENST00000589164 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
NFIC-207ENST00000589164 WIZO95785 1651 aa23.32■■□□□ 1.32
NFIC-207ENST00000589164 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
NFIC-207ENST00000589164 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
NFIC-207ENST00000589164 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
NFIC-207ENST00000589164 CFTRP13569 1480 aa23.1■■□□□ 1.29
NFIC-207ENST00000589164 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
NFIC-207ENST00000589164 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
NFIC-207ENST00000589164 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
NFIC-207ENST00000589164 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
NFIC-207ENST00000589164 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
NFIC-207ENST00000589164 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
NFIC-207ENST00000589164 WDR62O43379 1518 aa22.92■■□□□ 1.26
NFIC-207ENST00000589164 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
NFIC-207ENST00000589164 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
NFIC-207ENST00000589164 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
NFIC-207ENST00000589164 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
NFIC-207ENST00000589164 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
NFIC-207ENST00000589164 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
NFIC-207ENST00000589164 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
NFIC-207ENST00000589164 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
NFIC-207ENST00000589164 ZNF608Q9ULD9 1512 aaPredicted RBP22.42■■□□□ 1.18
NFIC-207ENST00000589164 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
NFIC-207ENST00000589164 SOGA1O94964 1423 aa22.31■■□□□ 1.16
NFIC-207ENST00000589164 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.163e-8■■■■■ 26.8
NFIC-207ENST00000589164 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
NFIC-207ENST00000589164 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
NFIC-207ENST00000589164 CUX1P39880 1505 aa22.26■■□□□ 1.15
NFIC-207ENST00000589164 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
NFIC-207ENST00000589164 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
NFIC-207ENST00000589164 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
NFIC-207ENST00000589164 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
NFIC-207ENST00000589164 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
NFIC-207ENST00000589164 FBLN2P98095 1184 aa22.07■■□□□ 1.12
NFIC-207ENST00000589164 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
NFIC-207ENST00000589164 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
NFIC-207ENST00000589164 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
NFIC-207ENST00000589164 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
NFIC-207ENST00000589164 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
NFIC-207ENST00000589164 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
NFIC-207ENST00000589164 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
NFIC-207ENST00000589164 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
NFIC-207ENST00000589164 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
NFIC-207ENST00000589164 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
NFIC-207ENST00000589164 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
NFIC-207ENST00000589164 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
NFIC-207ENST00000589164 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
NFIC-207ENST00000589164 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
NFIC-207ENST00000589164 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
NFIC-207ENST00000589164 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
NFIC-207ENST00000589164 CHD1O14646 1710 aa21.86■■□□□ 1.09
NFIC-207ENST00000589164 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
NFIC-207ENST00000589164 CLASP1Q7Z460 1538 aa21.84■■□□□ 1.09
NFIC-207ENST00000589164 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
NFIC-207ENST00000589164 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
NFIC-207ENST00000589164 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
NFIC-207ENST00000589164 GRIN2AQ12879 1464 aa21.75■■□□□ 1.07
NFIC-207ENST00000589164 NUP160Q12769 1436 aa21.73■■□□□ 1.07
NFIC-207ENST00000589164 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
NFIC-207ENST00000589164 ADAMTS12P58397 1594 aa21.69■■□□□ 1.06
NFIC-207ENST00000589164 IGF1RP08069 1367 aa21.65■■□□□ 1.06
NFIC-207ENST00000589164 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
NFIC-207ENST00000589164 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
NFIC-207ENST00000589164 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
NFIC-207ENST00000589164 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
NFIC-207ENST00000589164 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
NFIC-207ENST00000589164 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
NFIC-207ENST00000589164 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms