RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
TRIM65-204ENST00000543309 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
TRIM65-204ENST00000543309 ABCC9O60706 1549 aa32.82■■■□□ 2.85
TRIM65-204ENST00000543309 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
TRIM65-204ENST00000543309 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
TRIM65-204ENST00000543309 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
TRIM65-204ENST00000543309 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
TRIM65-204ENST00000543309 NACADO15069 1562 aa31.08■■■□□ 2.57
TRIM65-204ENST00000543309 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
TRIM65-204ENST00000543309 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
TRIM65-204ENST00000543309 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
TRIM65-204ENST00000543309 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
TRIM65-204ENST00000543309 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
TRIM65-204ENST00000543309 SCRIBQ14160 1630 aa30.31■■■□□ 2.44
TRIM65-204ENST00000543309 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
TRIM65-204ENST00000543309 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
TRIM65-204ENST00000543309 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
TRIM65-204ENST00000543309 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
TRIM65-204ENST00000543309 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
TRIM65-204ENST00000543309 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
TRIM65-204ENST00000543309 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
TRIM65-204ENST00000543309 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
TRIM65-204ENST00000543309 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
TRIM65-204ENST00000543309 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
TRIM65-204ENST00000543309 WIZO95785 1651 aa28.75■■■□□ 2.19
TRIM65-204ENST00000543309 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
TRIM65-204ENST00000543309 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
TRIM65-204ENST00000543309 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
TRIM65-204ENST00000543309 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
TRIM65-204ENST00000543309 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
TRIM65-204ENST00000543309 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
TRIM65-204ENST00000543309 CUX2O14529 1486 aa28.4■■■□□ 2.14
TRIM65-204ENST00000543309 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
TRIM65-204ENST00000543309 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
TRIM65-204ENST00000543309 NESP48681 1621 aa28.17■■■□□ 2.1
TRIM65-204ENST00000543309 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
TRIM65-204ENST00000543309 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
TRIM65-204ENST00000543309 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
TRIM65-204ENST00000543309 KIF21AQ7Z4S6 1674 aa27.89■■■□□ 2.06
TRIM65-204ENST00000543309 CFTRP13569 1480 aa27.83■■■□□ 2.05
TRIM65-204ENST00000543309 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
TRIM65-204ENST00000543309 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
TRIM65-204ENST00000543309 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
TRIM65-204ENST00000543309 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
TRIM65-204ENST00000543309 WDR62O43379 1518 aa27.58■■■□□ 2.01
TRIM65-204ENST00000543309 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
TRIM65-204ENST00000543309 CEP164Q9UPV0 1460 aa27.47■■□□□ 1.99
TRIM65-204ENST00000543309 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
TRIM65-204ENST00000543309 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
TRIM65-204ENST00000543309 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
TRIM65-204ENST00000543309 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
TRIM65-204ENST00000543309 CUX1P39880 1505 aa27.21■■□□□ 1.95
TRIM65-204ENST00000543309 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
TRIM65-204ENST00000543309 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
TRIM65-204ENST00000543309 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
TRIM65-204ENST00000543309 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
TRIM65-204ENST00000543309 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
TRIM65-204ENST00000543309 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
TRIM65-204ENST00000543309 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
TRIM65-204ENST00000543309 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
TRIM65-204ENST00000543309 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
TRIM65-204ENST00000543309 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
TRIM65-204ENST00000543309 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
TRIM65-204ENST00000543309 SOGA1O94964 1423 aa26.84■■□□□ 1.89
TRIM65-204ENST00000543309 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
TRIM65-204ENST00000543309 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
TRIM65-204ENST00000543309 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
TRIM65-204ENST00000543309 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
TRIM65-204ENST00000543309 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
TRIM65-204ENST00000543309 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
TRIM65-204ENST00000543309 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
TRIM65-204ENST00000543309 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
TRIM65-204ENST00000543309 EEA1Q15075 1411 aa26.69■■□□□ 1.86
TRIM65-204ENST00000543309 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
TRIM65-204ENST00000543309 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
TRIM65-204ENST00000543309 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
TRIM65-204ENST00000543309 CHD1O14646 1710 aa26.62■■□□□ 1.85
TRIM65-204ENST00000543309 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
TRIM65-204ENST00000543309 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
TRIM65-204ENST00000543309 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.845e-9■■■■■ 37.9
TRIM65-204ENST00000543309 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
TRIM65-204ENST00000543309 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
TRIM65-204ENST00000543309 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
TRIM65-204ENST00000543309 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
TRIM65-204ENST00000543309 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.82
TRIM65-204ENST00000543309 IGF1RP08069 1367 aa26.45■■□□□ 1.82
TRIM65-204ENST00000543309 CUL7Q14999 1698 aa26.43■■□□□ 1.82
TRIM65-204ENST00000543309 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
TRIM65-204ENST00000543309 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
TRIM65-204ENST00000543309 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
TRIM65-204ENST00000543309 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
TRIM65-204ENST00000543309 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
TRIM65-204ENST00000543309 KIF21BO75037 1637 aa26.36■■□□□ 1.81
TRIM65-204ENST00000543309 FBLN2P98095 1184 aa26.33■■□□□ 1.81
TRIM65-204ENST00000543309 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
TRIM65-204ENST00000543309 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
TRIM65-204ENST00000543309 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
TRIM65-204ENST00000543309 CYB5RLQ6IPT4 315 aa26.3■■□□□ 1.8
TRIM65-204ENST00000543309 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
TRIM65-204ENST00000543309 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms