RNA–Protein interactions for RNA: ENST00000567513.1

KLHDC4-219, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-219ENST00000567513 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
KLHDC4-219ENST00000567513 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
KLHDC4-219ENST00000567513 NISCHQ9Y2I1 1504 aa18.06■□□□□ 0.48
KLHDC4-219ENST00000567513 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-219ENST00000567513 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
KLHDC4-219ENST00000567513 CCDC180Q9P1Z9 1646 aa15.88■□□□□ 0.13
KLHDC4-219ENST00000567513 ABCC9O60706 1549 aa15.64■□□□□ 0.09
KLHDC4-219ENST00000567513 FOXD1Q16676 465 aa15.4■□□□□ 0.06
KLHDC4-219ENST00000567513 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
KLHDC4-219ENST00000567513 NACADO15069 1562 aa15.04■□□□□ -0
KLHDC4-219ENST00000567513 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
KLHDC4-219ENST00000567513 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
KLHDC4-219ENST00000567513 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
KLHDC4-219ENST00000567513 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
KLHDC4-219ENST00000567513 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
KLHDC4-219ENST00000567513 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
KLHDC4-219ENST00000567513 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
KLHDC4-219ENST00000567513 MSH5O43196 834 aa14.52□□□□□ -0.09
KLHDC4-219ENST00000567513 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
KLHDC4-219ENST00000567513 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
KLHDC4-219ENST00000567513 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
KLHDC4-219ENST00000567513 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
KLHDC4-219ENST00000567513 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
KLHDC4-219ENST00000567513 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
KLHDC4-219ENST00000567513 ADRA2BP18089 450 aa14.34□□□□□ -0.11
KLHDC4-219ENST00000567513 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
KLHDC4-219ENST00000567513 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
KLHDC4-219ENST00000567513 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
KLHDC4-219ENST00000567513 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
KLHDC4-219ENST00000567513 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
KLHDC4-219ENST00000567513 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
KLHDC4-219ENST00000567513 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
KLHDC4-219ENST00000567513 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
KLHDC4-219ENST00000567513 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
KLHDC4-219ENST00000567513 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
KLHDC4-219ENST00000567513 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
KLHDC4-219ENST00000567513 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
KLHDC4-219ENST00000567513 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
KLHDC4-219ENST00000567513 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
KLHDC4-219ENST00000567513 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.21
KLHDC4-219ENST00000567513 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
KLHDC4-219ENST00000567513 WIZO95785 1651 aa13.69□□□□□ -0.22
KLHDC4-219ENST00000567513 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
KLHDC4-219ENST00000567513 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
KLHDC4-219ENST00000567513 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
KLHDC4-219ENST00000567513 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
KLHDC4-219ENST00000567513 NESP48681 1621 aa13.51□□□□□ -0.25
KLHDC4-219ENST00000567513 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
KLHDC4-219ENST00000567513 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
KLHDC4-219ENST00000567513 CFTRP13569 1480 aa13.44□□□□□ -0.26
KLHDC4-219ENST00000567513 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
KLHDC4-219ENST00000567513 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
KLHDC4-219ENST00000567513 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
KLHDC4-219ENST00000567513 CUX2O14529 1486 aa13.29□□□□□ -0.28
KLHDC4-219ENST00000567513 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
KLHDC4-219ENST00000567513 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
KLHDC4-219ENST00000567513 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.29
KLHDC4-219ENST00000567513 WDR62O43379 1518 aa13.17□□□□□ -0.3
KLHDC4-219ENST00000567513 THOC2Q8NI27 1593 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-219ENST00000567513 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-219ENST00000567513 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
KLHDC4-219ENST00000567513 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
KLHDC4-219ENST00000567513 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
KLHDC4-219ENST00000567513 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
KLHDC4-219ENST00000567513 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
KLHDC4-219ENST00000567513 SOGA1O94964 1423 aa13.08□□□□□ -0.32
KLHDC4-219ENST00000567513 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
KLHDC4-219ENST00000567513 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
KLHDC4-219ENST00000567513 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
KLHDC4-219ENST00000567513 CUX1P39880 1505 aa13.02□□□□□ -0.33
KLHDC4-219ENST00000567513 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
KLHDC4-219ENST00000567513 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
KLHDC4-219ENST00000567513 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
KLHDC4-219ENST00000567513 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
KLHDC4-219ENST00000567513 FBLN2P98095 1184 aa12.96□□□□□ -0.33
KLHDC4-219ENST00000567513 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
KLHDC4-219ENST00000567513 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
KLHDC4-219ENST00000567513 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
KLHDC4-219ENST00000567513 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
KLHDC4-219ENST00000567513 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
KLHDC4-219ENST00000567513 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
KLHDC4-219ENST00000567513 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
KLHDC4-219ENST00000567513 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
KLHDC4-219ENST00000567513 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
KLHDC4-219ENST00000567513 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
KLHDC4-219ENST00000567513 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
KLHDC4-219ENST00000567513 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
KLHDC4-219ENST00000567513 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
KLHDC4-219ENST00000567513 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
KLHDC4-219ENST00000567513 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
KLHDC4-219ENST00000567513 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
KLHDC4-219ENST00000567513 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
KLHDC4-219ENST00000567513 IGF1RP08069 1367 aa12.77□□□□□ -0.37
KLHDC4-219ENST00000567513 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
KLHDC4-219ENST00000567513 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
KLHDC4-219ENST00000567513 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
KLHDC4-219ENST00000567513 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
KLHDC4-219ENST00000567513 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.37
KLHDC4-219ENST00000567513 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
KLHDC4-219ENST00000567513 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms