RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 NISCHQ9Y2I1 1504 aa38.2■■■■□ 3.71
TSC2-225ENST00000569110 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.94
TSC2-225ENST00000569110 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
TSC2-225ENST00000569110 ABCC9O60706 1549 aa32.02■■■□□ 2.72
TSC2-225ENST00000569110 DCAF1Q9Y4B6 1507 aa31.6■■■□□ 2.65
TSC2-225ENST00000569110 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
TSC2-225ENST00000569110 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
TSC2-225ENST00000569110 NACADO15069 1562 aa31.18■■■□□ 2.58
TSC2-225ENST00000569110 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.55
TSC2-225ENST00000569110 SHROOM4Q9ULL8 1493 aa30.94■■■□□ 2.54
TSC2-225ENST00000569110 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
TSC2-225ENST00000569110 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
TSC2-225ENST00000569110 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
TSC2-225ENST00000569110 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.398e-7■■■□□ 18.8
TSC2-225ENST00000569110 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
TSC2-225ENST00000569110 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
TSC2-225ENST00000569110 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
TSC2-225ENST00000569110 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
TSC2-225ENST00000569110 BAZ1AQ9NRL2 1556 aaPredicted RBP29.5■■■□□ 2.31
TSC2-225ENST00000569110 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
TSC2-225ENST00000569110 WIZO95785 1651 aa29.27■■■□□ 2.28
TSC2-225ENST00000569110 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
TSC2-225ENST00000569110 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
TSC2-225ENST00000569110 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
TSC2-225ENST00000569110 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
TSC2-225ENST00000569110 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
TSC2-225ENST00000569110 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
TSC2-225ENST00000569110 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
TSC2-225ENST00000569110 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
TSC2-225ENST00000569110 BAZ1BQ9UIG0 1483 aaKnown RBP28.77■■■□□ 2.2
TSC2-225ENST00000569110 HMGXB3Q12766 1538 aa28.71■■■□□ 2.19
TSC2-225ENST00000569110 CCDC88BA6NC98 1476 aa28.64■■■□□ 2.18
TSC2-225ENST00000569110 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
TSC2-225ENST00000569110 CFTRP13569 1480 aa28.07■■■□□ 2.08
TSC2-225ENST00000569110 CADPSQ9ULU8 1353 aa28■■■□□ 2.07
TSC2-225ENST00000569110 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
TSC2-225ENST00000569110 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
TSC2-225ENST00000569110 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
TSC2-225ENST00000569110 NESP48681 1621 aa27.84■■■□□ 2.05
TSC2-225ENST00000569110 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
TSC2-225ENST00000569110 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
TSC2-225ENST00000569110 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
TSC2-225ENST00000569110 ERCC6Q03468 1493 aa27.69■■■□□ 2.02
TSC2-225ENST00000569110 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
TSC2-225ENST00000569110 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
TSC2-225ENST00000569110 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
TSC2-225ENST00000569110 CUX1P39880 1505 aa27.61■■■□□ 2.01
TSC2-225ENST00000569110 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
TSC2-225ENST00000569110 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
TSC2-225ENST00000569110 CEP164Q9UPV0 1460 aa27.52■■■□□ 2
TSC2-225ENST00000569110 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
TSC2-225ENST00000569110 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
TSC2-225ENST00000569110 SOGA1O94964 1423 aa27.38■■□□□ 1.97
TSC2-225ENST00000569110 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
TSC2-225ENST00000569110 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
TSC2-225ENST00000569110 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
TSC2-225ENST00000569110 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
TSC2-225ENST00000569110 EEA1Q15075 1411 aa27.26■■□□□ 1.95
TSC2-225ENST00000569110 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
TSC2-225ENST00000569110 CUX2O14529 1486 aa27.25■■□□□ 1.95
TSC2-225ENST00000569110 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
TSC2-225ENST00000569110 LOC105371045A0A1W2PR82 267 aa27.21■■□□□ 1.95
TSC2-225ENST00000569110 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
TSC2-225ENST00000569110 WDR62O43379 1518 aa27.15■■□□□ 1.94
TSC2-225ENST00000569110 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
TSC2-225ENST00000569110 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.93
TSC2-225ENST00000569110 KIF27Q86VH2 1401 aa27.09■■□□□ 1.93
TSC2-225ENST00000569110 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
TSC2-225ENST00000569110 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
TSC2-225ENST00000569110 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
TSC2-225ENST00000569110 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
TSC2-225ENST00000569110 KIF21BO75037 1637 aa26.96■■□□□ 1.91
TSC2-225ENST00000569110 IGF1RP08069 1367 aa26.91■■□□□ 1.9
TSC2-225ENST00000569110 ABCA5Q8WWZ7 1642 aa26.91■■□□□ 1.9
TSC2-225ENST00000569110 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
TSC2-225ENST00000569110 IFT140Q96RY7 1462 aa26.89■■□□□ 1.89
TSC2-225ENST00000569110 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
TSC2-225ENST00000569110 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
TSC2-225ENST00000569110 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
TSC2-225ENST00000569110 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.88
TSC2-225ENST00000569110 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
TSC2-225ENST00000569110 ZNF608Q9ULD9 1512 aaPredicted RBP26.77■■□□□ 1.88
TSC2-225ENST00000569110 TNIKQ9UKE5 1360 aa26.77■■□□□ 1.88
TSC2-225ENST00000569110 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.877e-7■■■■■ 38.9
TSC2-225ENST00000569110 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
TSC2-225ENST00000569110 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
TSC2-225ENST00000569110 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
TSC2-225ENST00000569110 CUL7Q14999 1698 aa26.73■■□□□ 1.87
TSC2-225ENST00000569110 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
TSC2-225ENST00000569110 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
TSC2-225ENST00000569110 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
TSC2-225ENST00000569110 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
TSC2-225ENST00000569110 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
TSC2-225ENST00000569110 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
TSC2-225ENST00000569110 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
TSC2-225ENST00000569110 CLIP1P30622 1438 aa26.43■■□□□ 1.82
TSC2-225ENST00000569110 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
TSC2-225ENST00000569110 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
TSC2-225ENST00000569110 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
TSC2-225ENST00000569110 GRIN2AQ12879 1464 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms