RNA–Protein interactions for RNA: ENST00000341919.7

NFIC-201, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-201ENST00000341919 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
NFIC-201ENST00000341919 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
NFIC-201ENST00000341919 ABCC9O60706 1549 aa33.75■■■□□ 2.99
NFIC-201ENST00000341919 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
NFIC-201ENST00000341919 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
NFIC-201ENST00000341919 NACADO15069 1562 aa32.12■■■□□ 2.73
NFIC-201ENST00000341919 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
NFIC-201ENST00000341919 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
NFIC-201ENST00000341919 PABPN1Q86U42 306 aaKnown RBP eCLIP31.64■■■□□ 2.65
NFIC-201ENST00000341919 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
NFIC-201ENST00000341919 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
NFIC-201ENST00000341919 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
NFIC-201ENST00000341919 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
NFIC-201ENST00000341919 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.58
NFIC-201ENST00000341919 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
NFIC-201ENST00000341919 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
NFIC-201ENST00000341919 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
NFIC-201ENST00000341919 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
NFIC-201ENST00000341919 SMARCA4P51532 1647 aa29.84■■■□□ 2.37
NFIC-201ENST00000341919 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
NFIC-201ENST00000341919 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
NFIC-201ENST00000341919 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.34
NFIC-201ENST00000341919 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
NFIC-201ENST00000341919 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
NFIC-201ENST00000341919 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
NFIC-201ENST00000341919 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
NFIC-201ENST00000341919 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
NFIC-201ENST00000341919 WIZO95785 1651 aa29.4■■■□□ 2.3
NFIC-201ENST00000341919 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
NFIC-201ENST00000341919 NESP48681 1621 aa29.19■■■□□ 2.26
NFIC-201ENST00000341919 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
NFIC-201ENST00000341919 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.22
NFIC-201ENST00000341919 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.21
NFIC-201ENST00000341919 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
NFIC-201ENST00000341919 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
NFIC-201ENST00000341919 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
NFIC-201ENST00000341919 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
NFIC-201ENST00000341919 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
NFIC-201ENST00000341919 CFTRP13569 1480 aa28.63■■■□□ 2.17
NFIC-201ENST00000341919 CUX2O14529 1486 aa28.63■■■□□ 2.17
NFIC-201ENST00000341919 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
NFIC-201ENST00000341919 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
NFIC-201ENST00000341919 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
NFIC-201ENST00000341919 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
NFIC-201ENST00000341919 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
NFIC-201ENST00000341919 WDR62O43379 1518 aa28.33■■■□□ 2.13
NFIC-201ENST00000341919 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
NFIC-201ENST00000341919 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
NFIC-201ENST00000341919 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
NFIC-201ENST00000341919 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
NFIC-201ENST00000341919 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
NFIC-201ENST00000341919 ZNF608Q9ULD9 1512 aaPredicted RBP27.89■■■□□ 2.06
NFIC-201ENST00000341919 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
NFIC-201ENST00000341919 CUX1P39880 1505 aa27.84■■■□□ 2.05
NFIC-201ENST00000341919 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
NFIC-201ENST00000341919 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
NFIC-201ENST00000341919 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
NFIC-201ENST00000341919 SOGA1O94964 1423 aa27.77■■■□□ 2.04
NFIC-201ENST00000341919 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.034e-7■■■■■ 30.6
NFIC-201ENST00000341919 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
NFIC-201ENST00000341919 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
NFIC-201ENST00000341919 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
NFIC-201ENST00000341919 OSCARQ8IYS5 282 aa27.61■■■□□ 2.01
NFIC-201ENST00000341919 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.011e-7■□□□□ 10.2
NFIC-201ENST00000341919 SYNJ1O43426 1573 aa27.57■■■□□ 2
NFIC-201ENST00000341919 FBLN2P98095 1184 aa27.56■■■□□ 2
NFIC-201ENST00000341919 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
NFIC-201ENST00000341919 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
NFIC-201ENST00000341919 WDR97A6NE52 1622 aa27.45■■□□□ 1.98
NFIC-201ENST00000341919 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
NFIC-201ENST00000341919 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
NFIC-201ENST00000341919 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
NFIC-201ENST00000341919 CHD1O14646 1710 aa27.39■■□□□ 1.98
NFIC-201ENST00000341919 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
NFIC-201ENST00000341919 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
NFIC-201ENST00000341919 PBRM1Q86U86 1689 aa27.32■■□□□ 1.96
NFIC-201ENST00000341919 ABCA5Q8WWZ7 1642 aa27.31■■□□□ 1.96
NFIC-201ENST00000341919 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
NFIC-201ENST00000341919 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
NFIC-201ENST00000341919 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
NFIC-201ENST00000341919 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
NFIC-201ENST00000341919 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
NFIC-201ENST00000341919 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
NFIC-201ENST00000341919 ARHGEF11O15085 1522 aa27.08■■□□□ 1.93
NFIC-201ENST00000341919 ADAMTS12P58397 1594 aa27.07■■□□□ 1.92
NFIC-201ENST00000341919 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
NFIC-201ENST00000341919 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
NFIC-201ENST00000341919 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
NFIC-201ENST00000341919 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
NFIC-201ENST00000341919 CYB5RLQ6IPT4 315 aa27.02■■□□□ 1.92
NFIC-201ENST00000341919 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
NFIC-201ENST00000341919 IGF1RP08069 1367 aa26.99■■□□□ 1.91
NFIC-201ENST00000341919 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
NFIC-201ENST00000341919 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
NFIC-201ENST00000341919 NUP160Q12769 1436 aa26.88■■□□□ 1.89
NFIC-201ENST00000341919 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
NFIC-201ENST00000341919 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
NFIC-201ENST00000341919 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
NFIC-201ENST00000341919 CUL7Q14999 1698 aa26.78■■□□□ 1.88
NFIC-201ENST00000341919 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms