Protein–RNA interactions for Protein: Q3LI63

KRTAP20-1, Keratin-associated protein 20-1, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP20-1Q3LI63 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP20-1Q3LI63 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
KRTAP20-1Q3LI63 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC13.43□□□□□ -0.26
KRTAP20-1Q3LI63 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRTAP20-1Q3LI63 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KRTAP20-1Q3LI63 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP20-1Q3LI63 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP20-1Q3LI63 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC12.91□□□□□ -0.34
KRTAP20-1Q3LI63 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC12.84□□□□□ -0.35
KRTAP20-1Q3LI63 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP20-1Q3LI63 ZNRF2P1-201ENST00000441407 443 ntBASIC12.74□□□□□ -0.37
KRTAP20-1Q3LI63 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
KRTAP20-1Q3LI63 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP20-1Q3LI63 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP20-1Q3LI63 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP20-1Q3LI63 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC12.71□□□□□ -0.37
KRTAP20-1Q3LI63 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KRTAP20-1Q3LI63 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KRTAP20-1Q3LI63 AC006077.2-201ENST00000623591 457 ntBASIC12.59□□□□□ -0.39
KRTAP20-1Q3LI63 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP20-1Q3LI63 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP20-1Q3LI63 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KRTAP20-1Q3LI63 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP20-1Q3LI63 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KRTAP20-1Q3LI63 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP20-1Q3LI63 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC12.41□□□□□ -0.42
KRTAP20-1Q3LI63 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KRTAP20-1Q3LI63 AP002365.1-201ENST00000603448 772 ntBASIC12.39□□□□□ -0.43
KRTAP20-1Q3LI63 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP20-1Q3LI63 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP20-1Q3LI63 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP20-1Q3LI63 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP20-1Q3LI63 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP20-1Q3LI63 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
KRTAP20-1Q3LI63 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP20-1Q3LI63 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP20-1Q3LI63 RPS2P35-201ENST00000443417 897 ntBASIC12.22□□□□□ -0.45
KRTAP20-1Q3LI63 INO80B-203ENST00000409917 796 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP20-1Q3LI63 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP20-1Q3LI63 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC12.19□□□□□ -0.46
KRTAP20-1Q3LI63 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP20-1Q3LI63 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KRTAP20-1Q3LI63 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC12.17□□□□□ -0.46
KRTAP20-1Q3LI63 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC12.17□□□□□ -0.46
KRTAP20-1Q3LI63 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP20-1Q3LI63 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
KRTAP20-1Q3LI63 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP20-1Q3LI63 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC12.11□□□□□ -0.47
KRTAP20-1Q3LI63 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP20-1Q3LI63 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP20-1Q3LI63 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
KRTAP20-1Q3LI63 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC12.07□□□□□ -0.48
KRTAP20-1Q3LI63 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP20-1Q3LI63 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP20-1Q3LI63 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP20-1Q3LI63 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
KRTAP20-1Q3LI63 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC11.95□□□□□ -0.5
KRTAP20-1Q3LI63 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP20-1Q3LI63 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP20-1Q3LI63 HLA-V-202ENST00000446817 847 ntBASIC11.92□□□□□ -0.5
KRTAP20-1Q3LI63 MIR7108-201ENST00000614319 87 ntBASIC11.92□□□□□ -0.5
KRTAP20-1Q3LI63 MBP-237ENST00000579129 1052 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP20-1Q3LI63 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP20-1Q3LI63 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP20-1Q3LI63 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP20-1Q3LI63 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP20-1Q3LI63 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
KRTAP20-1Q3LI63 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP20-1Q3LI63 AC015813.7-201ENST00000623294 581 ntBASIC11.86□□□□□ -0.51
KRTAP20-1Q3LI63 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP20-1Q3LI63 PVT1-219ENST00000523427 938 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP20-1Q3LI63 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP20-1Q3LI63 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC11.81□□□□□ -0.52
KRTAP20-1Q3LI63 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
KRTAP20-1Q3LI63 ABHD17AP4-201ENST00000411545 909 ntBASIC11.72□□□□□ -0.53
KRTAP20-1Q3LI63 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP20-1Q3LI63 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC11.72□□□□□ -0.53
KRTAP20-1Q3LI63 RARRES2P7-201ENST00000567349 469 ntBASIC11.72□□□□□ -0.53
KRTAP20-1Q3LI63 AC097358.2-201ENST00000607541 1159 ntBASIC11.72□□□□□ -0.53
KRTAP20-1Q3LI63 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KRTAP20-1Q3LI63 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC11.71□□□□□ -0.53
KRTAP20-1Q3LI63 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KRTAP20-1Q3LI63 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP20-1Q3LI63 SUZ12P1-203ENST00000578195 985 ntBASIC11.7□□□□□ -0.54
KRTAP20-1Q3LI63 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC11.69□□□□□ -0.54
KRTAP20-1Q3LI63 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP20-1Q3LI63 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP20-1Q3LI63 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP20-1Q3LI63 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KRTAP20-1Q3LI63 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC11.65□□□□□ -0.54
KRTAP20-1Q3LI63 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
KRTAP20-1Q3LI63 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
KRTAP20-1Q3LI63 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP20-1Q3LI63 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP20-1Q3LI63 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP20-1Q3LI63 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC11.58□□□□□ -0.56
KRTAP20-1Q3LI63 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP20-1Q3LI63 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP20-1Q3LI63 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP20-1Q3LI63 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms