RNA–Protein interactions for RNA: ENST00000394450.6

PRELID2-202, Transcript of PRELI domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene PRELID2, Length 1,102 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID2-202ENST00000394450 NISCHQ9Y2I1 1504 aa72.84■■■■■ 9.25
PRELID2-202ENST00000394450 CCDC180Q9P1Z9 1646 aa65.12■■■■■ 8.02
PRELID2-202ENST00000394450 ABCC9O60706 1549 aa64.69■■■■■ 7.95
PRELID2-202ENST00000394450 RB1CC1Q8TDY2 1594 aa61.82■■■■■ 7.49
PRELID2-202ENST00000394450 NACADO15069 1562 aa61.51■■■■■ 7.44
PRELID2-202ENST00000394450 DCAF8L2P0C7V8 631 aa61.47■■■■■ 7.43
PRELID2-202ENST00000394450 MYO15BQ96JP2 1530 aa60.8■■■■■ 7.32
PRELID2-202ENST00000394450 ZCCHC6Q5VYS8 1495 aaKnown RBP60.45■■■■■ 7.27
PRELID2-202ENST00000394450 PABPN1Q86U42 306 aaKnown RBP eCLIP60.35■■■■■ 7.25
PRELID2-202ENST00000394450 UNC13AQ9UPW8 1703 aa60.25■■■■■ 7.24
PRELID2-202ENST00000394450 DCAF1Q9Y4B6 1507 aa60.2■■■■■ 7.23
PRELID2-202ENST00000394450 DNAJC5BQ9UF47 199 aa60.16■■■■■ 7.22
PRELID2-202ENST00000394450 BICRAQ9NZM4 1560 aa59.86■■■■■ 7.17
PRELID2-202ENST00000394450 SCRIBQ14160 1630 aa59.4■■■■■ 7.1
PRELID2-202ENST00000394450 SHROOM4Q9ULL8 1493 aa59.25■■■■■ 7.07
PRELID2-202ENST00000394450 EIF4G1Q04637 1599 aaKnown RBP58.43■■■■■ 6.94
PRELID2-202ENST00000394450 CC2D2AQ9P2K1 1620 aa58.42■■■■■ 6.94
PRELID2-202ENST00000394450 CECR2Q9BXF3 1484 aa58.24■■■■■ 6.91
PRELID2-202ENST00000394450 NCAPD3P42695 1498 aa56.77■■■■■ 6.68
PRELID2-202ENST00000394450 SMARCA4P51532 1647 aa56.69■■■■■ 6.67
PRELID2-202ENST00000394450 ATAD2BQ9ULI0 1458 aa56.65■■■■■ 6.66
PRELID2-202ENST00000394450 SMARCA2P51531 1590 aa56.57■■■■■ 6.65
PRELID2-202ENST00000394450 BAZ1AQ9NRL2 1556 aaPredicted RBP56.55■■■■■ 6.64
PRELID2-202ENST00000394450 HMGXB3Q12766 1538 aa56.37■■■■■ 6.61
PRELID2-202ENST00000394450 BAZ1BQ9UIG0 1483 aaKnown RBP56.19■■■■■ 6.59
PRELID2-202ENST00000394450 PEG3Q9GZU2 1588 aa56.12■■■■■ 6.57
PRELID2-202ENST00000394450 MROH2BQ7Z745 1585 aa56.1■■■■■ 6.57
PRELID2-202ENST00000394450 ERCC6Q03468 1493 aa55.91■■■■■ 6.54
PRELID2-202ENST00000394450 NESP48681 1621 aa55.66■■■■■ 6.5
PRELID2-202ENST00000394450 CUX2O14529 1486 aa55.57■■■■■ 6.49
PRELID2-202ENST00000394450 WIZO95785 1651 aa55.45■■■■■ 6.47
PRELID2-202ENST00000394450 LAMC3Q9Y6N6 1575 aa55.42■■■■■ 6.46
PRELID2-202ENST00000394450 RSF1Q96T23 1441 aaPredicted RBP55.16■■■■■ 6.42
PRELID2-202ENST00000394450 PDS5BQ9NTI5 1447 aa55.16■■■■■ 6.42
PRELID2-202ENST00000394450 CADPSQ9ULU8 1353 aa55.11■■■■■ 6.41
PRELID2-202ENST00000394450 DNAJC5Q9H3Z4 198 aa54.99■■■■■ 6.39
PRELID2-202ENST00000394450 THOC2Q8NI27 1593 aaKnown RBP54.96■■■■■ 6.39
PRELID2-202ENST00000394450 KIF21AQ7Z4S6 1674 aa54.93■■■■■ 6.38
PRELID2-202ENST00000394450 TOP2AP11388 1531 aaKnown RBP54.82■■■■■ 6.37
PRELID2-202ENST00000394450 MRC2Q9UBG0 1479 aa54.59■■■■■ 6.33
PRELID2-202ENST00000394450 CFTRP13569 1480 aa54.54■■■■■ 6.32
PRELID2-202ENST00000394450 CEP164Q9UPV0 1460 aa54.49■■■■■ 6.31
PRELID2-202ENST00000394450 FANCD2Q9BXW9 1451 aa54.47■■■■■ 6.31
PRELID2-202ENST00000394450 WDR62O43379 1518 aa54.39■■■■■ 6.3
PRELID2-202ENST00000394450 CCDC88BA6NC98 1476 aa54.21■■■■■ 6.27
PRELID2-202ENST00000394450 PRDM2Q13029 1718 aa53.96■■■■■ 6.23
PRELID2-202ENST00000394450 URB2Q14146 1524 aaKnown RBP53.92■■■■■ 6.22
PRELID2-202ENST00000394450 ABCC8Q09428 1581 aa53.48■■■■■ 6.15
PRELID2-202ENST00000394450 TOPBP1Q92547 1522 aa53.46■■■■■ 6.15
PRELID2-202ENST00000394450 IFT140Q96RY7 1462 aa53.39■■■■■ 6.14
PRELID2-202ENST00000394450 DNMBPQ6XZF7 1577 aa53.31■■■■■ 6.12
PRELID2-202ENST00000394450 SUPT5HO00267 1087 aaKnown RBP53.24■■■■■ 6.11
PRELID2-202ENST00000394450 OSCARQ8IYS5 282 aa53.22■■■■■ 6.11
PRELID2-202ENST00000394450 ZNF608Q9ULD9 1512 aaPredicted RBP53.17■■■■■ 6.1
PRELID2-202ENST00000394450 POLA1P09884 1462 aaPredicted RBP52.94■■■■■ 6.06
PRELID2-202ENST00000394450 EIF4G3O43432 1585 aaKnown RBP52.9■■■■■ 6.06
PRELID2-202ENST00000394450 TARBP1Q13395 1621 aaKnown RBP52.88■■■■■ 6.06
PRELID2-202ENST00000394450 TRIM41Q8WV44 630 aa52.86■■■■■ 6.05
PRELID2-202ENST00000394450 AQRO60306 1485 aaKnown RBP eCLIP52.8■■■■■ 6.04
PRELID2-202ENST00000394450 SOGA1O94964 1423 aa52.78■■■■■ 6.04
PRELID2-202ENST00000394450 RAD54L2Q9Y4B4 1467 aa52.74■■■■■ 6.03
PRELID2-202ENST00000394450 FGD5Q6ZNL6 1462 aa52.69■■■■■ 6.03
PRELID2-202ENST00000394450 CUX1P39880 1505 aa52.68■■■■■ 6.02
PRELID2-202ENST00000394450 TDRD9Q8NDG6 1382 aaKnown RBP52.59■■■■■ 6.01
PRELID2-202ENST00000394450 FBLN2P98095 1184 aa52.51■■■■■ 6
PRELID2-202ENST00000394450 WDR97A6NE52 1622 aa52.47■■■■■ 5.99
PRELID2-202ENST00000394450 CHD1O14646 1710 aa52.4■■■■■ 5.98
PRELID2-202ENST00000394450 RIMBP3CA6NJZ7 1639 aa52.31■■■■■ 5.96
PRELID2-202ENST00000394450 RIMBP3BA6NNM3 1639 aa52.31■■■■■ 5.96
PRELID2-202ENST00000394450 RIMBP3Q9UFD9 1639 aa52.31■■■■■ 5.96
PRELID2-202ENST00000394450 SNAPC4Q5SXM2 1469 aa52.29■■■■■ 5.96
PRELID2-202ENST00000394450 GRIN2BQ13224 1484 aa52.25■■■■■ 5.96
PRELID2-202ENST00000394450 ARHGEF11O15085 1522 aa52.23■■■■■ 5.95
PRELID2-202ENST00000394450 MAGI1Q96QZ7 1491 aaPredicted RBP52.19■■■■■ 5.95
PRELID2-202ENST00000394450 CHMP7Q8WUX9 453 aaPredicted RBP52.19■■■■■ 5.95
PRELID2-202ENST00000394450 GAPVD1Q14C86 1478 aa52.13■■■■■ 5.94
PRELID2-202ENST00000394450 ABCA10Q8WWZ4 1543 aa52.13■■■■■ 5.94
PRELID2-202ENST00000394450 WRNQ14191 1432 aaPredicted RBP eCLIP52.09■■■■■ 5.93
PRELID2-202ENST00000394450 SYNJ2O15056 1496 aa52.01■■■■■ 5.92
PRELID2-202ENST00000394450 TOP2BQ02880 1626 aa52■■■■■ 5.91
PRELID2-202ENST00000394450 PBRM1Q86U86 1689 aa51.99■■■■■ 5.91
PRELID2-202ENST00000394450 BIVM-ERCC5R4GMW8 1640 aa51.97■■■■■ 5.91
PRELID2-202ENST00000394450 ABCA5Q8WWZ7 1642 aa51.94■■■■■ 5.91
PRELID2-202ENST00000394450 SYNJ1O43426 1573 aa51.93■■■■■ 5.9
PRELID2-202ENST00000394450 CYB5RLQ6IPT4 315 aa51.92■■■■■ 5.9
PRELID2-202ENST00000394450 CLASP1Q7Z460 1538 aa51.82■■■■■ 5.89
PRELID2-202ENST00000394450 ARAP1Q96P48 1450 aa51.73■■■■■ 5.87
PRELID2-202ENST00000394450 GRIN2AQ12879 1464 aa51.55■■■■■ 5.84
PRELID2-202ENST00000394450 ADAMTS12P58397 1594 aa51.54■■■■■ 5.84
PRELID2-202ENST00000394450 FHAD1B1AJZ9 1412 aa51.51■■■■■ 5.84
PRELID2-202ENST00000394450 ERICH3Q5RHP9 1530 aa51.5■■■■■ 5.84
PRELID2-202ENST00000394450 NUP160Q12769 1436 aa51.33■■■■■ 5.81
PRELID2-202ENST00000394450 CEP170Q5SW79 1584 aa51.28■■■■■ 5.8
PRELID2-202ENST00000394450 TRHP20396 242 aaPredicted RBP51.26■■■■■ 5.8
PRELID2-202ENST00000394450 KIF27Q86VH2 1401 aa51.12■■■■■ 5.77
PRELID2-202ENST00000394450 ERCC6L2Q5T890 1561 aa51.01■■■■■ 5.76
PRELID2-202ENST00000394450 SHROOM2Q13796 1616 aa51■■■■■ 5.75
PRELID2-202ENST00000394450 IGF1RP08069 1367 aa50.96■■■■■ 5.75
PRELID2-202ENST00000394450 JPH4Q96JJ6 628 aa50.92■■■■■ 5.74
PRELID2-202ENST00000394450 PRG4Q92954 1404 aaPredicted RBP50.86■■■■■ 5.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms