RNA–Protein interactions for RNA: ENST00000431519.6

CDV3-203, Transcript of CDV3 homolog, humanhuman

TSL 1 (best) BASIC

Gene CDV3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-203ENST00000431519 NISCHQ9Y2I1 1504 aa76,88■■■■■ 9,9
CDV3-203ENST00000431519 CCDC180Q9P1Z9 1646 aa68,78■■■■■ 8,6
CDV3-203ENST00000431519 ABCC9O60706 1549 aa68,57■■■■■ 8,57
CDV3-203ENST00000431519 RB1CC1Q8TDY2 1594 aa65,34■■■■■ 8,05
CDV3-203ENST00000431519 NACADO15069 1562 aa64,95■■■■■ 7,99
CDV3-203ENST00000431519 DCAF8L2P0C7V8 631 aa64,91■■■■■ 7,98
CDV3-203ENST00000431519 MYO15BQ96JP2 1530 aa64,08■■■■■ 7,85
CDV3-203ENST00000431519 DNAJC5BQ9UF47 199 aa63,97■■■■■ 7,83
CDV3-203ENST00000431519 PABPN1Q86U42 306 aaKnown RBP eCLIP63,94■■■■■ 7,83
CDV3-203ENST00000431519 UNC13AQ9UPW8 1703 aa63,9■■■■■ 7,82
CDV3-203ENST00000431519 ZCCHC6Q5VYS8 1495 aaKnown RBP63,78■■■■■ 7,8
CDV3-203ENST00000431519 DCAF1Q9Y4B6 1507 aa63,43■■■■■ 7,74
CDV3-203ENST00000431519 BICRAQ9NZM4 1560 aa63,43■■■■■ 7,74
CDV3-203ENST00000431519 SCRIBQ14160 1630 aa62,84■■■■■ 7,65
CDV3-203ENST00000431519 SHROOM4Q9ULL8 1493 aa62,49■■■■■ 7,59
CDV3-203ENST00000431519 CC2D2AQ9P2K1 1620 aa61,91■■■■■ 7,5
CDV3-203ENST00000431519 EIF4G1Q04637 1599 aaKnown RBP61,86■■■■■ 7,49
CDV3-203ENST00000431519 CECR2Q9BXF3 1484 aa61,68■■■■■ 7,47
CDV3-203ENST00000431519 NCAPD3P42695 1498 aa59,95■■■■■ 7,19
CDV3-203ENST00000431519 SMARCA4P51532 1647 aa59,91■■■■■ 7,18
CDV3-203ENST00000431519 ATAD2BQ9ULI0 1458 aa59,87■■■■■ 7,17
CDV3-203ENST00000431519 SMARCA2P51531 1590 aa59,69■■■■■ 7,15
CDV3-203ENST00000431519 BAZ1AQ9NRL2 1556 aaPredicted RBP59,65■■■■■ 7,14
CDV3-203ENST00000431519 HMGXB3Q12766 1538 aa59,54■■■■■ 7,12
CDV3-203ENST00000431519 BAZ1BQ9UIG0 1483 aaKnown RBP59,34■■■■■ 7,09
CDV3-203ENST00000431519 MROH2BQ7Z745 1585 aa59,29■■■■■ 7,08
CDV3-203ENST00000431519 PEG3Q9GZU2 1588 aa59,25■■■■■ 7,08
CDV3-203ENST00000431519 ERCC6Q03468 1493 aa59,17■■■■■ 7,06
CDV3-203ENST00000431519 NESP48681 1621 aa59,01■■■■■ 7,04
CDV3-203ENST00000431519 CUX2O14529 1486 aa58,84■■■■■ 7,01
CDV3-203ENST00000431519 WIZO95785 1651 aa58,62■■■■■ 6,97
CDV3-203ENST00000431519 LAMC3Q9Y6N6 1575 aa58,56■■■■■ 6,97
CDV3-203ENST00000431519 DNAJC5Q9H3Z4 198 aa58,4■■■■■ 6,94
CDV3-203ENST00000431519 THOC2Q8NI27 1593 aaKnown RBP58,28■■■■■ 6,92
CDV3-203ENST00000431519 KIF21AQ7Z4S6 1674 aa58,24■■■■■ 6,91
CDV3-203ENST00000431519 PDS5BQ9NTI5 1447 aa58,22■■■■■ 6,91
CDV3-203ENST00000431519 CADPSQ9ULU8 1353 aa58,18■■■■■ 6,9
CDV3-203ENST00000431519 RSF1Q96T23 1441 aaPredicted RBP58,17■■■■■ 6,9
CDV3-203ENST00000431519 TOP2AP11388 1531 aaKnown RBP57,85■■■■■ 6,85
CDV3-203ENST00000431519 MRC2Q9UBG0 1479 aa57,73■■■■■ 6,83
CDV3-203ENST00000431519 CEP164Q9UPV0 1460 aa57,59■■■■■ 6,81
CDV3-203ENST00000431519 CFTRP13569 1480 aa57,58■■■■■ 6,81
CDV3-203ENST00000431519 FANCD2Q9BXW9 1451 aa57,56■■■■■ 6,81
CDV3-203ENST00000431519 WDR62O43379 1518 aa57,55■■■■■ 6,8
CDV3-203ENST00000431519 CCDC88BA6NC98 1476 aa57,22■■■■■ 6,75
CDV3-203ENST00000431519 URB2Q14146 1524 aaKnown RBP57,06■■■■■ 6,73
CDV3-203ENST00000431519 PRDM2Q13029 1718 aa57,05■■■■■ 6,72
CDV3-203ENST00000431519 TOPBP1Q92547 1522 aa56,5■■■■■ 6,64
CDV3-203ENST00000431519 IFT140Q96RY7 1462 aa56,39■■■■■ 6,62
CDV3-203ENST00000431519 ABCC8Q09428 1581 aa56,33■■■■■ 6,61
CDV3-203ENST00000431519 ZNF608Q9ULD9 1512 aaPredicted RBP56,33■■■■■ 6,61
CDV3-203ENST00000431519 DNMBPQ6XZF7 1577 aa56,32■■■■■ 6,61
CDV3-203ENST00000431519 OSCARQ8IYS5 282 aa56,25■■■■■ 6,6
CDV3-203ENST00000431519 TRIM41Q8WV44 630 aa56,16■■■■■ 6,58
CDV3-203ENST00000431519 EIF4G3O43432 1585 aaKnown RBP56,02■■■■■ 6,56
CDV3-203ENST00000431519 SUPT5HO00267 1087 aaKnown RBP56,01■■■■■ 6,56
CDV3-203ENST00000431519 TARBP1Q13395 1621 aaKnown RBP55,96■■■■■ 6,55
CDV3-203ENST00000431519 POLA1P09884 1462 aaPredicted RBP55,95■■■■■ 6,55
CDV3-203ENST00000431519 AQRO60306 1485 aaKnown RBP eCLIP55,87■■■■■ 6,532e-11■■■□□ 16,1
CDV3-203ENST00000431519 RAD54L2Q9Y4B4 1467 aa55,79■■■■■ 6,52
CDV3-203ENST00000431519 SOGA1O94964 1423 aa55,72■■■■■ 6,51
CDV3-203ENST00000431519 CUX1P39880 1505 aa55,68■■■■■ 6,5
CDV3-203ENST00000431519 FGD5Q6ZNL6 1462 aa55,68■■■■■ 6,5
CDV3-203ENST00000431519 TDRD9Q8NDG6 1382 aaKnown RBP55,59■■■■■ 6,49
CDV3-203ENST00000431519 CHD1O14646 1710 aa55,55■■■■■ 6,48
CDV3-203ENST00000431519 RIMBP3CA6NJZ7 1639 aa55,51■■■■■ 6,48
CDV3-203ENST00000431519 RIMBP3BA6NNM3 1639 aa55,51■■■■■ 6,48
CDV3-203ENST00000431519 RIMBP3Q9UFD9 1639 aa55,51■■■■■ 6,48
CDV3-203ENST00000431519 FBLN2P98095 1184 aa55,5■■■■■ 6,48
CDV3-203ENST00000431519 ARHGEF11O15085 1522 aa55,37■■■■■ 6,45
CDV3-203ENST00000431519 WDR97A6NE52 1622 aa55,33■■■■■ 6,45
CDV3-203ENST00000431519 SNAPC4Q5SXM2 1469 aa55,3■■■■■ 6,44
CDV3-203ENST00000431519 GRIN2BQ13224 1484 aa55,17■■■■■ 6,42
CDV3-203ENST00000431519 MAGI1Q96QZ7 1491 aaPredicted RBP55,11■■■■■ 6,41
CDV3-203ENST00000431519 CHMP7Q8WUX9 453 aaPredicted RBP55,07■■■■■ 6,41
CDV3-203ENST00000431519 GAPVD1Q14C86 1478 aa55,04■■■■■ 6,4
CDV3-203ENST00000431519 ABCA10Q8WWZ4 1543 aa55,01■■■■■ 6,4
CDV3-203ENST00000431519 PBRM1Q86U86 1689 aa55,01■■■■■ 6,4
CDV3-203ENST00000431519 CYB5RLQ6IPT4 315 aa54,99■■■■■ 6,39
CDV3-203ENST00000431519 SYNJ2O15056 1496 aa54,93■■■■■ 6,38
CDV3-203ENST00000431519 ABCA5Q8WWZ7 1642 aa54,92■■■■■ 6,38
CDV3-203ENST00000431519 WRNQ14191 1432 aaPredicted RBP eCLIP54,88■■■■■ 6,38
CDV3-203ENST00000431519 SYNJ1O43426 1573 aa54,88■■■■■ 6,38
CDV3-203ENST00000431519 CLASP1Q7Z460 1538 aa54,86■■■■■ 6,37
CDV3-203ENST00000431519 ARAP1Q96P48 1450 aa54,86■■■■■ 6,37
CDV3-203ENST00000431519 TOP2BQ02880 1626 aa54,85■■■■■ 6,37
CDV3-203ENST00000431519 BIVM-ERCC5R4GMW8 1640 aa54,85■■■■■ 6,37
CDV3-203ENST00000431519 ADAMTS12P58397 1594 aa54,5■■■■■ 6,31
CDV3-203ENST00000431519 GRIN2AQ12879 1464 aa54,47■■■■■ 6,31
CDV3-203ENST00000431519 FHAD1B1AJZ9 1412 aa54,34■■■■■ 6,29
CDV3-203ENST00000431519 ERICH3Q5RHP9 1530 aa54,32■■■■■ 6,29
CDV3-203ENST00000431519 TRHP20396 242 aaPredicted RBP54,29■■■■■ 6,28
CDV3-203ENST00000431519 CEP170Q5SW79 1584 aa54,28■■■■■ 6,28
CDV3-203ENST00000431519 NUP160Q12769 1436 aa54,24■■■■■ 6,27
CDV3-203ENST00000431519 ERCC6L2Q5T890 1561 aa54,12■■■■■ 6,25
CDV3-203ENST00000431519 SHROOM2Q13796 1616 aa53,95■■■■■ 6,23
CDV3-203ENST00000431519 KIF27Q86VH2 1401 aa53,81■■■■■ 6,2
CDV3-203ENST00000431519 PRG4Q92954 1404 aaPredicted RBP53,75■■■■■ 6,19
CDV3-203ENST00000431519 IGF1RP08069 1367 aa53,74■■■■■ 6,19
CDV3-203ENST00000431519 JPH4Q96JJ6 628 aa53,72■■■■■ 6,19
Retrieved 100 of 20,778 RNA–protein pairs in 12,4 ms