RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 NISCHQ9Y2I1 1504 aa70.94■■■■■ 8.95
SYNGR1-202ENST00000318801 CCDC180Q9P1Z9 1646 aa63.22■■■■■ 7.71
SYNGR1-202ENST00000318801 ABCC9O60706 1549 aa62.18■■■■■ 7.55
SYNGR1-202ENST00000318801 RB1CC1Q8TDY2 1594 aa59.74■■■■■ 7.15
SYNGR1-202ENST00000318801 DCAF8L2P0C7V8 631 aa59.67■■■■■ 7.14
SYNGR1-202ENST00000318801 NACADO15069 1562 aa59.57■■■■■ 7.13
SYNGR1-202ENST00000318801 MYO15BQ96JP2 1530 aa59.08■■■■■ 7.05
SYNGR1-202ENST00000318801 ZCCHC6Q5VYS8 1495 aaKnown RBP58.96■■■■■ 7.03
SYNGR1-202ENST00000318801 DCAF1Q9Y4B6 1507 aa58.69■■■■■ 6.99
SYNGR1-202ENST00000318801 UNC13AQ9UPW8 1703 aa58.22■■■■■ 6.91
SYNGR1-202ENST00000318801 PABPN1Q86U42 306 aaKnown RBP eCLIP58.11■■■■■ 6.89
SYNGR1-202ENST00000318801 BICRAQ9NZM4 1560 aa57.76■■■■■ 6.84
SYNGR1-202ENST00000318801 SCRIBQ14160 1630 aa57.63■■■■■ 6.82
SYNGR1-202ENST00000318801 DNAJC5BQ9UF47 199 aa57.31■■■■■ 6.77
SYNGR1-202ENST00000318801 SHROOM4Q9ULL8 1493 aa57.29■■■■■ 6.76
SYNGR1-202ENST00000318801 EIF4G1Q04637 1599 aaKnown RBP56.35■■■■■ 6.61
SYNGR1-202ENST00000318801 CC2D2AQ9P2K1 1620 aa56.21■■■■■ 6.59
SYNGR1-202ENST00000318801 CECR2Q9BXF3 1484 aa55.95■■■■■ 6.55
SYNGR1-202ENST00000318801 SMARCA4P51532 1647 aa55.09■■■■■ 6.41
SYNGR1-202ENST00000318801 BAZ1AQ9NRL2 1556 aaPredicted RBP55.06■■■■■ 6.4
SYNGR1-202ENST00000318801 NCAPD3P42695 1498 aa54.95■■■■■ 6.39
SYNGR1-202ENST00000318801 ATAD2BQ9ULI0 1458 aa54.9■■■■■ 6.38
SYNGR1-202ENST00000318801 SMARCA2P51531 1590 aa54.9■■■■■ 6.38
SYNGR1-202ENST00000318801 HMGXB3Q12766 1538 aa54.62■■■■■ 6.33
SYNGR1-202ENST00000318801 MROH2BQ7Z745 1585 aa54.61■■■■■ 6.33
SYNGR1-202ENST00000318801 PEG3Q9GZU2 1588 aa54.55■■■■■ 6.32
SYNGR1-202ENST00000318801 BAZ1BQ9UIG0 1483 aaKnown RBP54.5■■■■■ 6.31
SYNGR1-202ENST00000318801 WIZO95785 1651 aa54.02■■■■■ 6.24
SYNGR1-202ENST00000318801 RSF1Q96T23 1441 aaPredicted RBP53.92■■■■■ 6.22
SYNGR1-202ENST00000318801 ERCC6Q03468 1493 aa53.75■■■■■ 6.2
SYNGR1-202ENST00000318801 NESP48681 1621 aa53.65■■■■■ 6.18
SYNGR1-202ENST00000318801 LAMC3Q9Y6N6 1575 aa53.57■■■■■ 6.17
SYNGR1-202ENST00000318801 TOP2AP11388 1531 aaKnown RBP53.45■■■■■ 6.15
SYNGR1-202ENST00000318801 CADPSQ9ULU8 1353 aa53.38■■■■■ 6.14
SYNGR1-202ENST00000318801 PDS5BQ9NTI5 1447 aa53.32■■■■■ 6.13
SYNGR1-202ENST00000318801 CUX2O14529 1486 aa53.23■■■■■ 6.11
SYNGR1-202ENST00000318801 KIF21AQ7Z4S6 1674 aa53.02■■■■■ 6.08
SYNGR1-202ENST00000318801 CFTRP13569 1480 aa52.93■■■■■ 6.06
SYNGR1-202ENST00000318801 THOC2Q8NI27 1593 aaKnown RBP52.87■■■■■ 6.05
SYNGR1-202ENST00000318801 CCDC88BA6NC98 1476 aa52.85■■■■■ 6.05
SYNGR1-202ENST00000318801 FANCD2Q9BXW9 1451 aa52.73■■■■■ 6.03
SYNGR1-202ENST00000318801 CEP164Q9UPV0 1460 aa52.73■■■■■ 6.03
SYNGR1-202ENST00000318801 MRC2Q9UBG0 1479 aa52.69■■■■■ 6.02
SYNGR1-202ENST00000318801 PRDM2Q13029 1718 aa52.49■■■■■ 5.99
SYNGR1-202ENST00000318801 SUPT5HO00267 1087 aaKnown RBP52.48■■■■■ 5.99
SYNGR1-202ENST00000318801 WDR62O43379 1518 aa52.46■■■■■ 5.99
SYNGR1-202ENST00000318801 URB2Q14146 1524 aaKnown RBP52.14■■■■■ 5.94
SYNGR1-202ENST00000318801 DNAJC5Q9H3Z4 198 aa52.04■■■■■ 5.92
SYNGR1-202ENST00000318801 ABCC8Q09428 1581 aa51.95■■■■■ 5.91
SYNGR1-202ENST00000318801 TOPBP1Q92547 1522 aa51.82■■■■■ 5.89
SYNGR1-202ENST00000318801 DNMBPQ6XZF7 1577 aa51.74■■■■■ 5.87
SYNGR1-202ENST00000318801 IFT140Q96RY7 1462 aa51.64■■■■■ 5.86
SYNGR1-202ENST00000318801 POLA1P09884 1462 aaPredicted RBP51.35■■■■■ 5.81
SYNGR1-202ENST00000318801 ZNF608Q9ULD9 1512 aaPredicted RBP51.32■■■■■ 5.81
SYNGR1-202ENST00000318801 CUX1P39880 1505 aa51.26■■■■■ 5.8
SYNGR1-202ENST00000318801 SOGA1O94964 1423 aa51.24■■■■■ 5.79
SYNGR1-202ENST00000318801 TARBP1Q13395 1621 aaKnown RBP51.23■■■■■ 5.79
SYNGR1-202ENST00000318801 FGD5Q6ZNL6 1462 aa51.19■■■■■ 5.78
SYNGR1-202ENST00000318801 RAD54L2Q9Y4B4 1467 aa51.12■■■■■ 5.77
SYNGR1-202ENST00000318801 OSCARQ8IYS5 282 aa51.12■■■■■ 5.77
SYNGR1-202ENST00000318801 EIF4G3O43432 1585 aaKnown RBP51.11■■■■■ 5.77
SYNGR1-202ENST00000318801 AQRO60306 1485 aaKnown RBP eCLIP51.07■■■■■ 5.771e-7■■■■■ 32.4
SYNGR1-202ENST00000318801 TDRD9Q8NDG6 1382 aaKnown RBP50.95■■■■■ 5.75
SYNGR1-202ENST00000318801 WRNQ14191 1432 aaPredicted RBP eCLIP50.92■■■■■ 5.74
SYNGR1-202ENST00000318801 WDR97A6NE52 1622 aa50.91■■■■■ 5.74
SYNGR1-202ENST00000318801 TOP2BQ02880 1626 aa50.78■■■■■ 5.72
SYNGR1-202ENST00000318801 BIVM-ERCC5R4GMW8 1640 aa50.74■■■■■ 5.71
SYNGR1-202ENST00000318801 FBLN2P98095 1184 aa50.71■■■■■ 5.71
SYNGR1-202ENST00000318801 ABCA10Q8WWZ4 1543 aa50.69■■■■■ 5.7
SYNGR1-202ENST00000318801 SYNJ1O43426 1573 aa50.68■■■■■ 5.7
SYNGR1-202ENST00000318801 GRIN2BQ13224 1484 aa50.66■■■■■ 5.7
SYNGR1-202ENST00000318801 GAPVD1Q14C86 1478 aa50.62■■■■■ 5.69
SYNGR1-202ENST00000318801 SNAPC4Q5SXM2 1469 aa50.56■■■■■ 5.68
SYNGR1-202ENST00000318801 MAGI1Q96QZ7 1491 aaPredicted RBP50.55■■■■■ 5.68
SYNGR1-202ENST00000318801 CHD1O14646 1710 aa50.55■■■■■ 5.68
SYNGR1-202ENST00000318801 CHMP7Q8WUX9 453 aaPredicted RBP50.52■■■■■ 5.68
SYNGR1-202ENST00000318801 ABCA5Q8WWZ7 1642 aa50.44■■■■■ 5.67
SYNGR1-202ENST00000318801 PBRM1Q86U86 1689 aa50.44■■■■■ 5.66
SYNGR1-202ENST00000318801 SYNJ2O15056 1496 aa50.35■■■■■ 5.65
SYNGR1-202ENST00000318801 TRIM41Q8WV44 630 aa50.24■■■■■ 5.63
SYNGR1-202ENST00000318801 RIMBP3CA6NJZ7 1639 aa50.11■■■■■ 5.61
SYNGR1-202ENST00000318801 RIMBP3BA6NNM3 1639 aa50.11■■■■■ 5.61
SYNGR1-202ENST00000318801 RIMBP3Q9UFD9 1639 aa50.11■■■■■ 5.61
SYNGR1-202ENST00000318801 ERICH3Q5RHP9 1530 aa50.11■■■■■ 5.61
SYNGR1-202ENST00000318801 ARHGEF11O15085 1522 aa50.08■■■■■ 5.61
SYNGR1-202ENST00000318801 FHAD1B1AJZ9 1412 aa50.03■■■■■ 5.6
SYNGR1-202ENST00000318801 ADAMTS12P58397 1594 aa49.99■■■■■ 5.59
SYNGR1-202ENST00000318801 GRIN2AQ12879 1464 aa49.96■■■■■ 5.59
SYNGR1-202ENST00000318801 CLASP1Q7Z460 1538 aa49.96■■■■■ 5.59
SYNGR1-202ENST00000318801 KIF27Q86VH2 1401 aa49.95■■■■■ 5.59
SYNGR1-202ENST00000318801 CYB5RLQ6IPT4 315 aa49.8■■■■■ 5.56
SYNGR1-202ENST00000318801 NUP160Q12769 1436 aa49.71■■■■■ 5.55
SYNGR1-202ENST00000318801 IGF1RP08069 1367 aa49.71■■■■■ 5.55
SYNGR1-202ENST00000318801 CEP170Q5SW79 1584 aa49.65■■■■■ 5.54
SYNGR1-202ENST00000318801 ARAP1Q96P48 1450 aa49.62■■■■■ 5.53
SYNGR1-202ENST00000318801 CUL7Q14999 1698 aa49.59■■■■■ 5.53
SYNGR1-202ENST00000318801 CARMIL1Q5VZK9 1371 aa49.46■■■■■ 5.51
SYNGR1-202ENST00000318801 JPH4Q96JJ6 628 aa49.37■■■■■ 5.49
SYNGR1-202ENST00000318801 SHROOM2Q13796 1616 aa49.34■■■■■ 5.49
SYNGR1-202ENST00000318801 RUSC2Q8N2Y8 1516 aa49.25■■■■■ 5.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms