Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.33e-8■■□□□ 12.9
LARP4Q71RC2 ATP6V0B-206ENST00000472277 536 ntTSL 317.15■□□□□ 0.344e-8■■□□□ 12.9
LARP4Q71RC2 PSME1-209ENST00000561142 865 ntTSL 512.15□□□□□ -0.464e-8■■□□□ 12.9
LARP4Q71RC2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.512e-7■■□□□ 12.9
LARP4Q71RC2 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.952e-7■■□□□ 12.9
LARP4Q71RC2 ANXA2-205ENST00000504475 3528 ntTSL 28.27□□□□□ -1.092e-7■■□□□ 12.9
LARP4Q71RC2 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.122e-7■■□□□ 12.9
LARP4Q71RC2 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.152e-7■■□□□ 12.9
LARP4Q71RC2 ANXA2-228ENST00000560014 2339 ntTSL 27.69□□□□□ -1.182e-7■■□□□ 12.9
LARP4Q71RC2 ODC1-204ENST00000446285 665 ntTSL 524.32■■□□□ 1.482e-8■■□□□ 12.9
LARP4Q71RC2 RNF220-209ENST00000474064 2734 ntTSL 220.75■□□□□ 0.912e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-214ENST00000484745 1951 ntTSL 517.48■□□□□ 0.392e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.182e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.182e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.322e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-213ENST00000480686 3835 ntTSL 212.5□□□□□ -0.412e-7■■□□□ 12.9
LARP4Q71RC2 RNF220-211ENST00000474956 3303 ntTSL 212.31□□□□□ -0.442e-7■■□□□ 12.9
LARP4Q71RC2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.581e-6■■□□□ 12.9
LARP4Q71RC2 P3H1-207ENST00000460031 2726 ntTSL 517.04■□□□□ 0.321e-6■■□□□ 12.9
LARP4Q71RC2 P3H1-214ENST00000495874 2813 ntTSL 215.91■□□□□ 0.141e-6■■□□□ 12.9
LARP4Q71RC2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.141e-6■■□□□ 12.9
LARP4Q71RC2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.071e-6■■□□□ 12.9
LARP4Q71RC2 ALG1-207ENST00000592661 1473 ntTSL 59.36□□□□□ -0.912e-8■■□□□ 12.9
LARP4Q71RC2 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.794e-17■■□□□ 12.9
LARP4Q71RC2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-12■■□□□ 12.9
LARP4Q71RC2 ARHGDIA-216ENST00000584397 622 ntTSL 222.92■■□□□ 1.262e-6■■□□□ 12.9
LARP4Q71RC2 ARHGDIA-213ENST00000583499 560 ntTSL 222.11■■□□□ 1.132e-6■■□□□ 12.9
LARP4Q71RC2 ARHGDIA-212ENST00000583111 574 ntTSL 217■□□□□ 0.312e-6■■□□□ 12.9
LARP4Q71RC2 ARHGDIA-209ENST00000582309 628 ntTSL 215.99■□□□□ 0.152e-6■■□□□ 12.9
LARP4Q71RC2 C1QBP-202ENST00000570805 688 ntTSL 39.28□□□□□ -0.927e-9■■□□□ 12.9
LARP4Q71RC2 C1QBP-203ENST00000573204 911 ntTSL 27.77□□□□□ -1.177e-9■■□□□ 12.9
LARP4Q71RC2 C1QBP-205ENST00000573421 330 ntTSL 22.59□□□□□ -1.997e-9■■□□□ 12.9
LARP4Q71RC2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.6■■□□□ 1.531e-6■■□□□ 12.9
LARP4Q71RC2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.441e-6■■□□□ 12.9
LARP4Q71RC2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.22■□□□□ 0.192e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.62■□□□□ 0.092e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-211ENST00000560881 1692 ntTSL 515.49■□□□□ 0.072e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14□□□□□ -0.172e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14□□□□□ -0.172e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14□□□□□ -0.172e-49■■□□□ 12.9
LARP4Q71RC2 RPL28-201ENST00000344063 4796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.722e-49■■□□□ 12.9
LARP4Q71RC2 POR-212ENST00000447222 2332 ntTSL 516.6■□□□□ 0.253e-9■■□□□ 12.9
LARP4Q71RC2 POR-202ENST00000412064 1044 ntTSL 512.43□□□□□ -0.423e-9■■□□□ 12.9
LARP4Q71RC2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.55■□□□□ 0.882e-6■■□□□ 12.9
LARP4Q71RC2 RPS3-208ENST00000527273 390 ntTSL 310.51□□□□□ -0.732e-17■■□□□ 12.9
LARP4Q71RC2 H3F3B-209ENST00000589949 842 ntTSL 216.34■□□□□ 0.214e-9■■□□□ 12.9
LARP4Q71RC2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.92□□□□□ -0.347e-7■■□□□ 12.9
LARP4Q71RC2 HNRNPU-228ENST00000640306 2917 ntTSL 516.57■□□□□ 0.241e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-217ENST00000638952 5678 ntTSL 516.29■□□□□ 0.21e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-209ENST00000476241 4844 ntTSL 515.56■□□□□ 0.081e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.071e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.041e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-214ENST00000638475 2698 ntTSL 514.3□□□□□ -0.121e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.171e-8■■□□□ 12.8
LARP4Q71RC2 RPL23-208ENST00000577760 3081 nt10.91□□□□□ -0.662e-47■■□□□ 12.8
LARP4Q71RC2 RPL23-209ENST00000584056 549 ntTSL 210.53□□□□□ -0.722e-47■■□□□ 12.8
LARP4Q71RC2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.293e-8■■□□□ 12.8
LARP4Q71RC2 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.53e-8■■□□□ 12.8
LARP4Q71RC2 FAM178B-202ENST00000470789 722 ntTSL 1 (best)10.79□□□□□ -0.683e-8■■□□□ 12.8
LARP4Q71RC2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.993e-10■■□□□ 12.8
LARP4Q71RC2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.98□□□□□ -0.333e-10■■□□□ 12.8
LARP4Q71RC2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.72□□□□□ -0.373e-10■■□□□ 12.8
LARP4Q71RC2 ANXA5-203ENST00000506395 1606 ntTSL 511.96□□□□□ -0.53e-10■■□□□ 12.8
LARP4Q71RC2 ANXA5-205ENST00000509648 1083 ntTSL 24.59□□□□□ -1.673e-10■■□□□ 12.8
LARP4Q71RC2 POLR2F-206ENST00000443002 1890 ntTSL 222.17■■□□□ 1.142e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.952e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.26■□□□□ 0.832e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-212ENST00000492213 550 ntTSL 419.48■□□□□ 0.712e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-209ENST00000483713 615 ntTSL 315.1■□□□□ 0.012e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.66□□□□□ -0.222e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-210ENST00000484894 551 ntTSL 413.44□□□□□ -0.262e-7■■□□□ 12.8
LARP4Q71RC2 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12.39□□□□□ -0.432e-7■■□□□ 12.8
LARP4Q71RC2 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC7.41□□□□□ -1.226e-13■■□□□ 12.8
LARP4Q71RC2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.94□□□□□ -0.188e-9■■□□□ 12.8
LARP4Q71RC2 CRLF1-205ENST00000597131 520 ntTSL 220.88■□□□□ 0.931e-14■■□□□ 12.8
LARP4Q71RC2 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)15.17■□□□□ 0.021e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.9□□□□□ -0.021e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.15□□□□□ -1.261e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.96□□□□□ -1.31e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-207ENST00000559763 244 ntTSL 35.47□□□□□ -1.531e-8■■□□□ 12.8
LARP4Q71RC2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.22□□□□□ -1.571e-8■■□□□ 12.8
LARP4Q71RC2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.62e-19■■□□□ 12.8
LARP4Q71RC2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.172e-19■■□□□ 12.8
LARP4Q71RC2 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.382e-19■■□□□ 12.8
LARP4Q71RC2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.92■■□□□ 1.585e-8■■□□□ 12.8
LARP4Q71RC2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.65e-8■■□□□ 12.8
LARP4Q71RC2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.285e-8■■□□□ 12.8
LARP4Q71RC2 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC12.09□□□□□ -0.475e-8■■□□□ 12.8
LARP4Q71RC2 ATRAID-204ENST00000472515 561 ntTSL 24.54□□□□□ -1.685e-8■■□□□ 12.8
LARP4Q71RC2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.266e-7■■□□□ 12.8
LARP4Q71RC2 CENPV-203ENST00000476243 1770 ntTSL 520.59■□□□□ 0.896e-7■■□□□ 12.8
LARP4Q71RC2 CENPV-202ENST00000472570 554 ntTSL 28.38□□□□□ -1.076e-7■■□□□ 12.8
LARP4Q71RC2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.115e-7■■□□□ 12.8
LARP4Q71RC2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.235e-7■■□□□ 12.8
LARP4Q71RC2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.67■□□□□ 0.583e-9■■□□□ 12.8
LARP4Q71RC2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.393e-9■■□□□ 12.8
LARP4Q71RC2 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.423e-9■■□□□ 12.8
LARP4Q71RC2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.711e-8■■□□□ 12.8
LARP4Q71RC2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.041e-8■■□□□ 12.8
Retrieved 100 of 15,922 protein–RNA pairs in 212.9 ms