RNA–Protein interactions for RNA: ENST00000368463.7

PBXIP1-202, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBXIP1, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-202ENST00000368463 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
PBXIP1-202ENST00000368463 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
PBXIP1-202ENST00000368463 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
PBXIP1-202ENST00000368463 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
PBXIP1-202ENST00000368463 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
PBXIP1-202ENST00000368463 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
PBXIP1-202ENST00000368463 HRCP23327 699 aa23.99■■□□□ 1.43
PBXIP1-202ENST00000368463 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
PBXIP1-202ENST00000368463 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
PBXIP1-202ENST00000368463 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
PBXIP1-202ENST00000368463 EHMT2Q96KQ7 1210 aa23.69■■□□□ 1.38
PBXIP1-202ENST00000368463 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
PBXIP1-202ENST00000368463 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
PBXIP1-202ENST00000368463 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
PBXIP1-202ENST00000368463 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
PBXIP1-202ENST00000368463 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
PBXIP1-202ENST00000368463 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
PBXIP1-202ENST00000368463 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
PBXIP1-202ENST00000368463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
PBXIP1-202ENST00000368463 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
PBXIP1-202ENST00000368463 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
PBXIP1-202ENST00000368463 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
PBXIP1-202ENST00000368463 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.17
PBXIP1-202ENST00000368463 NEUROD1Q13562 356 aa22.33■■□□□ 1.16
PBXIP1-202ENST00000368463 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
PBXIP1-202ENST00000368463 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
PBXIP1-202ENST00000368463 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.14
PBXIP1-202ENST00000368463 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
PBXIP1-202ENST00000368463 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
PBXIP1-202ENST00000368463 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
PBXIP1-202ENST00000368463 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
PBXIP1-202ENST00000368463 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
PBXIP1-202ENST00000368463 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
PBXIP1-202ENST00000368463 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
PBXIP1-202ENST00000368463 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
PBXIP1-202ENST00000368463 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
PBXIP1-202ENST00000368463 ABCC9O60706 1549 aa21.73■■□□□ 1.07
PBXIP1-202ENST00000368463 MIER1Q8N108 512 aa21.67■■□□□ 1.06
PBXIP1-202ENST00000368463 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
PBXIP1-202ENST00000368463 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
PBXIP1-202ENST00000368463 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
PBXIP1-202ENST00000368463 SOGA1O94964 1423 aa21.42■■□□□ 1.02
PBXIP1-202ENST00000368463 WIZO95785 1651 aa21.41■■□□□ 1.02
PBXIP1-202ENST00000368463 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
PBXIP1-202ENST00000368463 MYT1Q01538 1121 aa21.4■■□□□ 1.02
PBXIP1-202ENST00000368463 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
PBXIP1-202ENST00000368463 APLP2Q06481 763 aa21.37■■□□□ 1.01
PBXIP1-202ENST00000368463 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
PBXIP1-202ENST00000368463 ITGAEP38570 1179 aa21.35■■□□□ 1.01
PBXIP1-202ENST00000368463 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
PBXIP1-202ENST00000368463 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
PBXIP1-202ENST00000368463 BCANQ96GW7 911 aa21.29■■□□□ 1
PBXIP1-202ENST00000368463 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
PBXIP1-202ENST00000368463 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
PBXIP1-202ENST00000368463 SUPT16HQ9Y5B9 1047 aaKnown RBP21.03■□□□□ 0.96
PBXIP1-202ENST00000368463 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.95
PBXIP1-202ENST00000368463 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
PBXIP1-202ENST00000368463 CLIP1P30622 1438 aa20.93■□□□□ 0.94
PBXIP1-202ENST00000368463 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
PBXIP1-202ENST00000368463 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
PBXIP1-202ENST00000368463 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
PBXIP1-202ENST00000368463 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
PBXIP1-202ENST00000368463 FKBP8Q14318 412 aa20.83■□□□□ 0.93
PBXIP1-202ENST00000368463 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.93
PBXIP1-202ENST00000368463 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.92
PBXIP1-202ENST00000368463 TRIM52Q96A61 297 aa20.81■□□□□ 0.92
PBXIP1-202ENST00000368463 NACADO15069 1562 aa20.8■□□□□ 0.92
PBXIP1-202ENST00000368463 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
PBXIP1-202ENST00000368463 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
PBXIP1-202ENST00000368463 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
PBXIP1-202ENST00000368463 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
PBXIP1-202ENST00000368463 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
PBXIP1-202ENST00000368463 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
PBXIP1-202ENST00000368463 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
PBXIP1-202ENST00000368463 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
PBXIP1-202ENST00000368463 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
PBXIP1-202ENST00000368463 VPS8Q8N3P4 1428 aa20.65■□□□□ 0.9
PBXIP1-202ENST00000368463 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
PBXIP1-202ENST00000368463 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
PBXIP1-202ENST00000368463 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
PBXIP1-202ENST00000368463 EEA1Q15075 1411 aa20.61■□□□□ 0.89
PBXIP1-202ENST00000368463 NEFLP07196 543 aa20.58■□□□□ 0.89
PBXIP1-202ENST00000368463 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
PBXIP1-202ENST00000368463 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
PBXIP1-202ENST00000368463 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
PBXIP1-202ENST00000368463 SENP3-EIF4A1A0A087X0R7 540 aa20.49■□□□□ 0.87
PBXIP1-202ENST00000368463 KIF21BO75037 1637 aa20.45■□□□□ 0.86
PBXIP1-202ENST00000368463 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
PBXIP1-202ENST00000368463 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
PBXIP1-202ENST00000368463 ANP32CO43423 234 aa20.38■□□□□ 0.85
PBXIP1-202ENST00000368463 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
PBXIP1-202ENST00000368463 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
PBXIP1-202ENST00000368463 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
PBXIP1-202ENST00000368463 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.853e-6■□□□□ 8.3
PBXIP1-202ENST00000368463 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
PBXIP1-202ENST00000368463 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
PBXIP1-202ENST00000368463 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
PBXIP1-202ENST00000368463 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
PBXIP1-202ENST00000368463 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
PBXIP1-202ENST00000368463 MSH5O43196 834 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms