RNA–Protein interactions for RNA: ENST00000498907.2

CEBPA-201, Transcript of CCAAT enhancer binding protein alpha, humanhuman

APPRIS P1 BASIC

Gene CEBPA, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEBPA-201ENST00000498907 NISCHQ9Y2I1 1504 aa42.34■■■■■ 4.37
CEBPA-201ENST00000498907 SHROOM4Q9ULL8 1493 aa36.58■■■■□ 3.45
CEBPA-201ENST00000498907 SUPT5HO00267 1087 aaKnown RBP35.88■■■■□ 3.34
CEBPA-201ENST00000498907 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
CEBPA-201ENST00000498907 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
CEBPA-201ENST00000498907 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
CEBPA-201ENST00000498907 CHIC1Q5VXU3 224 aa34.74■■■■□ 3.15
CEBPA-201ENST00000498907 MYO15BQ96JP2 1530 aa34.64■■■■□ 3.14
CEBPA-201ENST00000498907 DCAF1Q9Y4B6 1507 aa34.51■■■■□ 3.11
CEBPA-201ENST00000498907 LOC105371045A0A1W2PR82 267 aa33.92■■■■□ 3.02
CEBPA-201ENST00000498907 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
CEBPA-201ENST00000498907 PCGF6Q9BYE7 350 aa33.84■■■■□ 3.01
CEBPA-201ENST00000498907 ABCC9O60706 1549 aa33.72■■■□□ 2.99
CEBPA-201ENST00000498907 HRCP23327 699 aa33.67■■■□□ 2.98
CEBPA-201ENST00000498907 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
CEBPA-201ENST00000498907 RB1CC1Q8TDY2 1594 aa33.28■■■□□ 2.92
CEBPA-201ENST00000498907 PPARGC1BQ86YN6 1023 aaKnown RBP33.27■■■□□ 2.92
CEBPA-201ENST00000498907 TRIM41Q8WV44 630 aa33.27■■■□□ 2.92
CEBPA-201ENST00000498907 FAM9AQ8IZU1 332 aaPredicted RBP33.23■■■□□ 2.91
CEBPA-201ENST00000498907 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
CEBPA-201ENST00000498907 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.89
CEBPA-201ENST00000498907 NACADO15069 1562 aa33.12■■■□□ 2.89
CEBPA-201ENST00000498907 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
CEBPA-201ENST00000498907 TRIM26Q12899 539 aaPredicted RBP32.98■■■□□ 2.87
CEBPA-201ENST00000498907 WIZO95785 1651 aa32.86■■■□□ 2.85
CEBPA-201ENST00000498907 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
CEBPA-201ENST00000498907 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.76
CEBPA-201ENST00000498907 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
CEBPA-201ENST00000498907 ABCC8Q09428 1581 aa32.23■■■□□ 2.75
CEBPA-201ENST00000498907 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
CEBPA-201ENST00000498907 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
CEBPA-201ENST00000498907 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
CEBPA-201ENST00000498907 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
CEBPA-201ENST00000498907 ZEB1P37275 1124 aaPredicted RBP32.1■■■□□ 2.73
CEBPA-201ENST00000498907 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
CEBPA-201ENST00000498907 TTBK1Q5TCY1 1321 aaPredicted RBP32.02■■■□□ 2.72
CEBPA-201ENST00000498907 SOGA1O94964 1423 aa31.97■■■□□ 2.71
CEBPA-201ENST00000498907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.88■■■□□ 2.69
CEBPA-201ENST00000498907 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
CEBPA-201ENST00000498907 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
CEBPA-201ENST00000498907 UBTFP17480 764 aaKnown RBP31.74■■■□□ 2.67
CEBPA-201ENST00000498907 CSRNP3Q8WYN3 585 aa31.74■■■□□ 2.67
CEBPA-201ENST00000498907 CEP162Q5TB80 1403 aa31.72■■■□□ 2.67
CEBPA-201ENST00000498907 CCER1Q8TC90 406 aaPredicted RBP31.69■■■□□ 2.66
CEBPA-201ENST00000498907 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
CEBPA-201ENST00000498907 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
CEBPA-201ENST00000498907 EEA1Q15075 1411 aa31.46■■■□□ 2.63
CEBPA-201ENST00000498907 PEG3Q9GZU2 1588 aa31.45■■■□□ 2.63
CEBPA-201ENST00000498907 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.63
CEBPA-201ENST00000498907 PELP1Q8IZL8 1130 aaKnown RBP31.43■■■□□ 2.62
CEBPA-201ENST00000498907 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
CEBPA-201ENST00000498907 GOLGA3Q08378 1498 aa31.38■■■□□ 2.61
CEBPA-201ENST00000498907 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
CEBPA-201ENST00000498907 RANGAP1P46060 587 aaPredicted RBP31.36■■■□□ 2.61
CEBPA-201ENST00000498907 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
CEBPA-201ENST00000498907 SCAF1Q9H7N4 1312 aaKnown RBP31.16■■■□□ 2.58
CEBPA-201ENST00000498907 HNRNPUL2Q1KMD3 747 aaKnown RBP31.14■■■□□ 2.58
CEBPA-201ENST00000498907 CLIP1P30622 1438 aa31.13■■■□□ 2.57
CEBPA-201ENST00000498907 RAPGEF2Q9Y4G8 1499 aa31.12■■■□□ 2.57
CEBPA-201ENST00000498907 KIF21BO75037 1637 aa31.06■■■□□ 2.56
CEBPA-201ENST00000498907 DIEXFQ68CQ4 756 aaKnown RBP31.05■■■□□ 2.56
CEBPA-201ENST00000498907 APLP2Q06481 763 aa30.93■■■□□ 2.54
CEBPA-201ENST00000498907 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
CEBPA-201ENST00000498907 TOP2BQ02880 1626 aa30.9■■■□□ 2.54
CEBPA-201ENST00000498907 NEUROD1Q13562 356 aa30.84■■■□□ 2.53
CEBPA-201ENST00000498907 ZNF316A6NFI3 1004 aaPredicted RBP30.76■■■□□ 2.51
CEBPA-201ENST00000498907 ACIN1Q9UKV3 1341 aaKnown RBP30.76■■■□□ 2.51
CEBPA-201ENST00000498907 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
CEBPA-201ENST00000498907 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
CEBPA-201ENST00000498907 CUX1P39880 1505 aa30.71■■■□□ 2.51
CEBPA-201ENST00000498907 PRXQ9BXM0 1461 aa30.67■■■□□ 2.5
CEBPA-201ENST00000498907 KANK4Q5T7N3 995 aaPredicted RBP30.67■■■□□ 2.5
CEBPA-201ENST00000498907 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
CEBPA-201ENST00000498907 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
CEBPA-201ENST00000498907 CFTRP13569 1480 aa30.55■■■□□ 2.48
CEBPA-201ENST00000498907 KIF27Q86VH2 1401 aa30.55■■■□□ 2.48
CEBPA-201ENST00000498907 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
CEBPA-201ENST00000498907 YTHDC1Q96MU7 727 aaKnown RBP30.51■■■□□ 2.48
CEBPA-201ENST00000498907 GTF3C3Q9Y5Q9 886 aa30.51■■■□□ 2.48
CEBPA-201ENST00000498907 CENPBP07199 599 aaPredicted RBP30.49■■■□□ 2.47
CEBPA-201ENST00000498907 MIER1Q8N108 512 aa30.46■■■□□ 2.47
CEBPA-201ENST00000498907 ITGAEP38570 1179 aa30.37■■■□□ 2.45
CEBPA-201ENST00000498907 ARHGAP35Q9NRY4 1499 aa30.34■■■□□ 2.45
CEBPA-201ENST00000498907 CUX2O14529 1486 aa30.34■■■□□ 2.45
CEBPA-201ENST00000498907 MYT1Q01538 1121 aa30.32■■■□□ 2.44
CEBPA-201ENST00000498907 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
CEBPA-201ENST00000498907 IGF1RP08069 1367 aa30.31■■■□□ 2.44
CEBPA-201ENST00000498907 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
CEBPA-201ENST00000498907 P3H3Q8IVL6 736 aa30.2■■■□□ 2.42
CEBPA-201ENST00000498907 RRBP1Q9P2E9 1410 aaKnown RBP30.18■■■□□ 2.42
CEBPA-201ENST00000498907 CARMIL1Q5VZK9 1371 aa30.18■■■□□ 2.42
CEBPA-201ENST00000498907 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
CEBPA-201ENST00000498907 CCNB3Q8WWL7 1395 aa30.15■■■□□ 2.42
CEBPA-201ENST00000498907 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
CEBPA-201ENST00000498907 CLSPNQ9HAW4 1339 aa30.07■■■□□ 2.4
CEBPA-201ENST00000498907 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
CEBPA-201ENST00000498907 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
CEBPA-201ENST00000498907 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
CEBPA-201ENST00000498907 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
CEBPA-201ENST00000498907 FAM50AQ14320 339 aaKnown RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms