RNA–Protein interactions for RNA: ENST00000472570.2

CENPV-202, Transcript of centromere protein V, humanhuman

TSL 2

Gene CENPV, Length 554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPV-202ENST00000472570 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
CENPV-202ENST00000472570 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
CENPV-202ENST00000472570 ABCC9O60706 1549 aa18.29■□□□□ 0.52
CENPV-202ENST00000472570 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
CENPV-202ENST00000472570 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
CENPV-202ENST00000472570 NACADO15069 1562 aa17.7■□□□□ 0.42
CENPV-202ENST00000472570 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
CENPV-202ENST00000472570 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
CENPV-202ENST00000472570 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
CENPV-202ENST00000472570 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
CENPV-202ENST00000472570 PABPN1Q86U42 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
CENPV-202ENST00000472570 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
CENPV-202ENST00000472570 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
CENPV-202ENST00000472570 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
CENPV-202ENST00000472570 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
CENPV-202ENST00000472570 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
CENPV-202ENST00000472570 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
CENPV-202ENST00000472570 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
CENPV-202ENST00000472570 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
CENPV-202ENST00000472570 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
CENPV-202ENST00000472570 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CENPV-202ENST00000472570 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
CENPV-202ENST00000472570 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
CENPV-202ENST00000472570 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
CENPV-202ENST00000472570 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
CENPV-202ENST00000472570 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
CENPV-202ENST00000472570 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
CENPV-202ENST00000472570 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
CENPV-202ENST00000472570 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
CENPV-202ENST00000472570 WIZO95785 1651 aa16.23■□□□□ 0.19
CENPV-202ENST00000472570 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
CENPV-202ENST00000472570 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
CENPV-202ENST00000472570 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
CENPV-202ENST00000472570 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
CENPV-202ENST00000472570 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
CENPV-202ENST00000472570 NESP48681 1621 aa15.87■□□□□ 0.13
CENPV-202ENST00000472570 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
CENPV-202ENST00000472570 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
CENPV-202ENST00000472570 CFTRP13569 1480 aa15.83■□□□□ 0.12
CENPV-202ENST00000472570 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
CENPV-202ENST00000472570 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
CENPV-202ENST00000472570 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
CENPV-202ENST00000472570 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
CENPV-202ENST00000472570 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
CENPV-202ENST00000472570 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
CENPV-202ENST00000472570 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
CENPV-202ENST00000472570 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
CENPV-202ENST00000472570 CUX2O14529 1486 aa15.53■□□□□ 0.08
CENPV-202ENST00000472570 WDR62O43379 1518 aa15.5■□□□□ 0.07
CENPV-202ENST00000472570 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
CENPV-202ENST00000472570 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
CENPV-202ENST00000472570 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
CENPV-202ENST00000472570 DNMBPQ6XZF7 1577 aa15.42■□□□□ 0.06
CENPV-202ENST00000472570 CUX1P39880 1505 aa15.38■□□□□ 0.05
CENPV-202ENST00000472570 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
CENPV-202ENST00000472570 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
CENPV-202ENST00000472570 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
CENPV-202ENST00000472570 SOGA1O94964 1423 aa15.32■□□□□ 0.04
CENPV-202ENST00000472570 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
CENPV-202ENST00000472570 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
CENPV-202ENST00000472570 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
CENPV-202ENST00000472570 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
CENPV-202ENST00000472570 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
CENPV-202ENST00000472570 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
CENPV-202ENST00000472570 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
CENPV-202ENST00000472570 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
CENPV-202ENST00000472570 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
CENPV-202ENST00000472570 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
CENPV-202ENST00000472570 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■■■■■ 31
CENPV-202ENST00000472570 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
CENPV-202ENST00000472570 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
CENPV-202ENST00000472570 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
CENPV-202ENST00000472570 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
CENPV-202ENST00000472570 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
CENPV-202ENST00000472570 KIF27Q86VH2 1401 aa15.06■□□□□ 0
CENPV-202ENST00000472570 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
CENPV-202ENST00000472570 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
CENPV-202ENST00000472570 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CENPV-202ENST00000472570 IGF1RP08069 1367 aa15□□□□□ -0.01
CENPV-202ENST00000472570 FBLN2P98095 1184 aa15□□□□□ -0.01
CENPV-202ENST00000472570 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
CENPV-202ENST00000472570 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
CENPV-202ENST00000472570 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
CENPV-202ENST00000472570 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
CENPV-202ENST00000472570 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.02
CENPV-202ENST00000472570 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
CENPV-202ENST00000472570 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
CENPV-202ENST00000472570 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
CENPV-202ENST00000472570 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
CENPV-202ENST00000472570 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
CENPV-202ENST00000472570 EEA1Q15075 1411 aa14.89□□□□□ -0.03
CENPV-202ENST00000472570 CHD1O14646 1710 aa14.89□□□□□ -0.03
CENPV-202ENST00000472570 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
CENPV-202ENST00000472570 CUL7Q14999 1698 aa14.86□□□□□ -0.03
CENPV-202ENST00000472570 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
CENPV-202ENST00000472570 NUP160Q12769 1436 aa14.82□□□□□ -0.04
CENPV-202ENST00000472570 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
CENPV-202ENST00000472570 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
CENPV-202ENST00000472570 CEP170Q5SW79 1584 aa14.77□□□□□ -0.05
CENPV-202ENST00000472570 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms