RNA–Protein interactions for RNA: ENST00000470701.1

POLR2F-208, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3 BASIC

Gene POLR2F, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-208ENST00000470701 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
POLR2F-208ENST00000470701 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
POLR2F-208ENST00000470701 ABCC9O60706 1549 aa33.44■■■□□ 2.94
POLR2F-208ENST00000470701 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
POLR2F-208ENST00000470701 NACADO15069 1562 aa31.68■■■□□ 2.66
POLR2F-208ENST00000470701 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
POLR2F-208ENST00000470701 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
POLR2F-208ENST00000470701 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
POLR2F-208ENST00000470701 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
POLR2F-208ENST00000470701 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
POLR2F-208ENST00000470701 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
POLR2F-208ENST00000470701 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
POLR2F-208ENST00000470701 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
POLR2F-208ENST00000470701 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
POLR2F-208ENST00000470701 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
POLR2F-208ENST00000470701 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
POLR2F-208ENST00000470701 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
POLR2F-208ENST00000470701 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
POLR2F-208ENST00000470701 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
POLR2F-208ENST00000470701 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
POLR2F-208ENST00000470701 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
POLR2F-208ENST00000470701 SMARCA2P51531 1590 aa29.1■■■□□ 2.25
POLR2F-208ENST00000470701 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
POLR2F-208ENST00000470701 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
POLR2F-208ENST00000470701 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
POLR2F-208ENST00000470701 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
POLR2F-208ENST00000470701 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
POLR2F-208ENST00000470701 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
POLR2F-208ENST00000470701 NESP48681 1621 aa28.78■■■□□ 2.2
POLR2F-208ENST00000470701 CUX2O14529 1486 aa28.71■■■□□ 2.19
POLR2F-208ENST00000470701 WIZO95785 1651 aa28.58■■■□□ 2.16
POLR2F-208ENST00000470701 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
POLR2F-208ENST00000470701 LAMC3Q9Y6N6 1575 aa28.56■■■□□ 2.16
POLR2F-208ENST00000470701 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
POLR2F-208ENST00000470701 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
POLR2F-208ENST00000470701 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
POLR2F-208ENST00000470701 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
POLR2F-208ENST00000470701 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
POLR2F-208ENST00000470701 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
POLR2F-208ENST00000470701 MRC2Q9UBG0 1479 aa28.14■■■□□ 2.09
POLR2F-208ENST00000470701 CFTRP13569 1480 aa28.08■■■□□ 2.09
POLR2F-208ENST00000470701 CEP164Q9UPV0 1460 aa28.07■■■□□ 2.08
POLR2F-208ENST00000470701 WDR62O43379 1518 aa28.06■■■□□ 2.08
POLR2F-208ENST00000470701 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
POLR2F-208ENST00000470701 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.06
POLR2F-208ENST00000470701 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
POLR2F-208ENST00000470701 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
POLR2F-208ENST00000470701 TOPBP1Q92547 1522 aa27.55■■■□□ 2
POLR2F-208ENST00000470701 IFT140Q96RY7 1462 aa27.49■■□□□ 1.99
POLR2F-208ENST00000470701 OSCARQ8IYS5 282 aa27.47■■□□□ 1.99
POLR2F-208ENST00000470701 ABCC8Q09428 1581 aa27.47■■□□□ 1.99
POLR2F-208ENST00000470701 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
POLR2F-208ENST00000470701 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
POLR2F-208ENST00000470701 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
POLR2F-208ENST00000470701 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
POLR2F-208ENST00000470701 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
POLR2F-208ENST00000470701 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
POLR2F-208ENST00000470701 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
POLR2F-208ENST00000470701 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.955e-7■■■■■ 39.8
POLR2F-208ENST00000470701 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
POLR2F-208ENST00000470701 SOGA1O94964 1423 aa27.16■■□□□ 1.94
POLR2F-208ENST00000470701 CUX1P39880 1505 aa27.14■■□□□ 1.94
POLR2F-208ENST00000470701 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
POLR2F-208ENST00000470701 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
POLR2F-208ENST00000470701 CHD1O14646 1710 aa27.1■■□□□ 1.93
POLR2F-208ENST00000470701 RIMBP3CA6NJZ7 1639 aa27.09■■□□□ 1.93
POLR2F-208ENST00000470701 RIMBP3BA6NNM3 1639 aa27.09■■□□□ 1.93
POLR2F-208ENST00000470701 RIMBP3Q9UFD9 1639 aa27.09■■□□□ 1.93
POLR2F-208ENST00000470701 FBLN2P98095 1184 aa27.05■■□□□ 1.92
POLR2F-208ENST00000470701 ARHGEF11O15085 1522 aa27■■□□□ 1.91
POLR2F-208ENST00000470701 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
POLR2F-208ENST00000470701 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.91
POLR2F-208ENST00000470701 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
POLR2F-208ENST00000470701 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
POLR2F-208ENST00000470701 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
POLR2F-208ENST00000470701 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
POLR2F-208ENST00000470701 GAPVD1Q14C86 1478 aa26.82■■□□□ 1.88
POLR2F-208ENST00000470701 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
POLR2F-208ENST00000470701 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
POLR2F-208ENST00000470701 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
POLR2F-208ENST00000470701 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
POLR2F-208ENST00000470701 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
POLR2F-208ENST00000470701 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
POLR2F-208ENST00000470701 ARAP1Q96P48 1450 aa26.75■■□□□ 1.87
POLR2F-208ENST00000470701 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
POLR2F-208ENST00000470701 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
POLR2F-208ENST00000470701 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
POLR2F-208ENST00000470701 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
POLR2F-208ENST00000470701 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
POLR2F-208ENST00000470701 TRHP20396 242 aaPredicted RBP26.49■■□□□ 1.83
POLR2F-208ENST00000470701 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
POLR2F-208ENST00000470701 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
POLR2F-208ENST00000470701 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
POLR2F-208ENST00000470701 NUP160Q12769 1436 aa26.45■■□□□ 1.82
POLR2F-208ENST00000470701 ERCC6L2Q5T890 1561 aa26.4■■□□□ 1.82
POLR2F-208ENST00000470701 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
POLR2F-208ENST00000470701 JPH4Q96JJ6 628 aa26.21■■□□□ 1.79
POLR2F-208ENST00000470701 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
POLR2F-208ENST00000470701 IGF1RP08069 1367 aa26.2■■□□□ 1.79
POLR2F-208ENST00000470701 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms