RNA–Protein interactions for RNA: ENST00000484745.5

RNF220-214, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-214ENST00000484745 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
RNF220-214ENST00000484745 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
RNF220-214ENST00000484745 ABCC9O60706 1549 aa33.57■■■□□ 2.96
RNF220-214ENST00000484745 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
RNF220-214ENST00000484745 NACADO15069 1562 aa32.22■■■□□ 2.75
RNF220-214ENST00000484745 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
RNF220-214ENST00000484745 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
RNF220-214ENST00000484745 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
RNF220-214ENST00000484745 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
RNF220-214ENST00000484745 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
RNF220-214ENST00000484745 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
RNF220-214ENST00000484745 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
RNF220-214ENST00000484745 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
RNF220-214ENST00000484745 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
RNF220-214ENST00000484745 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
RNF220-214ENST00000484745 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
RNF220-214ENST00000484745 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
RNF220-214ENST00000484745 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
RNF220-214ENST00000484745 SMARCA4P51532 1647 aa29.87■■■□□ 2.37
RNF220-214ENST00000484745 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
RNF220-214ENST00000484745 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
RNF220-214ENST00000484745 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
RNF220-214ENST00000484745 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
RNF220-214ENST00000484745 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
RNF220-214ENST00000484745 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
RNF220-214ENST00000484745 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
RNF220-214ENST00000484745 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
RNF220-214ENST00000484745 HRCP23327 699 aa29.48■■■□□ 2.31
RNF220-214ENST00000484745 WIZO95785 1651 aa29.32■■■□□ 2.28
RNF220-214ENST00000484745 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
RNF220-214ENST00000484745 NESP48681 1621 aa29.03■■■□□ 2.24
RNF220-214ENST00000484745 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
RNF220-214ENST00000484745 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.23
RNF220-214ENST00000484745 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.23
RNF220-214ENST00000484745 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
RNF220-214ENST00000484745 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
RNF220-214ENST00000484745 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
RNF220-214ENST00000484745 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
RNF220-214ENST00000484745 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.18
RNF220-214ENST00000484745 CFTRP13569 1480 aa28.69■■■□□ 2.18
RNF220-214ENST00000484745 CUX2O14529 1486 aa28.68■■■□□ 2.18
RNF220-214ENST00000484745 PCGF6Q9BYE7 350 aa28.67■■■□□ 2.18
RNF220-214ENST00000484745 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
RNF220-214ENST00000484745 THOC2Q8NI27 1593 aaKnown RBP28.59■■■□□ 2.17
RNF220-214ENST00000484745 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
RNF220-214ENST00000484745 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
RNF220-214ENST00000484745 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
RNF220-214ENST00000484745 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
RNF220-214ENST00000484745 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
RNF220-214ENST00000484745 WDR62O43379 1518 aa28.38■■■□□ 2.13
RNF220-214ENST00000484745 PELP1Q8IZL8 1130 aaKnown RBP28.36■■■□□ 2.13
RNF220-214ENST00000484745 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
RNF220-214ENST00000484745 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
RNF220-214ENST00000484745 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
RNF220-214ENST00000484745 TRIM26Q12899 539 aaPredicted RBP28.02■■■□□ 2.08
RNF220-214ENST00000484745 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
RNF220-214ENST00000484745 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
RNF220-214ENST00000484745 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.06
RNF220-214ENST00000484745 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
RNF220-214ENST00000484745 LOC105371045A0A1W2PR82 267 aa27.84■■■□□ 2.05
RNF220-214ENST00000484745 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
RNF220-214ENST00000484745 CUX1P39880 1505 aa27.83■■■□□ 2.05
RNF220-214ENST00000484745 ZNF608Q9ULD9 1512 aaPredicted RBP27.79■■■□□ 2.04
RNF220-214ENST00000484745 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
RNF220-214ENST00000484745 FGD5Q6ZNL6 1462 aa27.75■■■□□ 2.03
RNF220-214ENST00000484745 SOGA1O94964 1423 aa27.73■■■□□ 2.03
RNF220-214ENST00000484745 SCAF1Q9H7N4 1312 aaKnown RBP27.72■■■□□ 2.03
RNF220-214ENST00000484745 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
RNF220-214ENST00000484745 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
RNF220-214ENST00000484745 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
RNF220-214ENST00000484745 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.015e-7■■■■□ 25.9
RNF220-214ENST00000484745 TDRD9Q8NDG6 1382 aaKnown RBP27.57■■■□□ 2
RNF220-214ENST00000484745 TOP2BQ02880 1626 aa27.57■■■□□ 2
RNF220-214ENST00000484745 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
RNF220-214ENST00000484745 SYNJ1O43426 1573 aa27.55■■■□□ 2
RNF220-214ENST00000484745 WDR97A6NE52 1622 aa27.54■■■□□ 2
RNF220-214ENST00000484745 OSCARQ8IYS5 282 aa27.49■■□□□ 1.99
RNF220-214ENST00000484745 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
RNF220-214ENST00000484745 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
RNF220-214ENST00000484745 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
RNF220-214ENST00000484745 SNAPC4Q5SXM2 1469 aa27.37■■□□□ 1.97
RNF220-214ENST00000484745 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
RNF220-214ENST00000484745 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
RNF220-214ENST00000484745 FBLN2P98095 1184 aa27.3■■□□□ 1.96
RNF220-214ENST00000484745 CHD1O14646 1710 aa27.29■■□□□ 1.96
RNF220-214ENST00000484745 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
RNF220-214ENST00000484745 MYT1Q01538 1121 aa27.28■■□□□ 1.96
RNF220-214ENST00000484745 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
RNF220-214ENST00000484745 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
RNF220-214ENST00000484745 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
RNF220-214ENST00000484745 ACIN1Q9UKV3 1341 aaKnown RBP27.14■■□□□ 1.94
RNF220-214ENST00000484745 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
RNF220-214ENST00000484745 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
RNF220-214ENST00000484745 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
RNF220-214ENST00000484745 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
RNF220-214ENST00000484745 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
RNF220-214ENST00000484745 ARHGEF11O15085 1522 aa27.02■■□□□ 1.92
RNF220-214ENST00000484745 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.91
RNF220-214ENST00000484745 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.91
RNF220-214ENST00000484745 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms