RNA–Protein interactions for RNA: ENST00000584397.1

ARHGDIA-216, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-216ENST00000584397 NISCHQ9Y2I1 1504 aa60.31■■■■■ 7.25
ARHGDIA-216ENST00000584397 CCDC180Q9P1Z9 1646 aa53.53■■■■■ 6.16
ARHGDIA-216ENST00000584397 ABCC9O60706 1549 aa52.23■■■■■ 5.95
ARHGDIA-216ENST00000584397 NACADO15069 1562 aa50.34■■■■■ 5.65
ARHGDIA-216ENST00000584397 RB1CC1Q8TDY2 1594 aa50.32■■■■■ 5.65
ARHGDIA-216ENST00000584397 ZCCHC6Q5VYS8 1495 aaKnown RBP50.27■■■■■ 5.64
ARHGDIA-216ENST00000584397 MYO15BQ96JP2 1530 aa50.18■■■■■ 5.62
ARHGDIA-216ENST00000584397 DCAF8L2P0C7V8 631 aa50.16■■■■■ 5.62
ARHGDIA-216ENST00000584397 DCAF1Q9Y4B6 1507 aa49.98■■■■■ 5.59
ARHGDIA-216ENST00000584397 UNC13AQ9UPW8 1703 aa49.14■■■■■ 5.46
ARHGDIA-216ENST00000584397 BICRAQ9NZM4 1560 aa48.87■■■■■ 5.41
ARHGDIA-216ENST00000584397 PABPN1Q86U42 306 aaKnown RBP eCLIP48.84■■■■■ 5.41
ARHGDIA-216ENST00000584397 SCRIBQ14160 1630 aa48.76■■■■■ 5.4
ARHGDIA-216ENST00000584397 SHROOM4Q9ULL8 1493 aa48.41■■■■■ 5.34
ARHGDIA-216ENST00000584397 DNAJC5BQ9UF47 199 aa47.97■■■■■ 5.27
ARHGDIA-216ENST00000584397 EIF4G1Q04637 1599 aaKnown RBP47.52■■■■■ 5.2
ARHGDIA-216ENST00000584397 CC2D2AQ9P2K1 1620 aa47.28■■■■■ 5.16
ARHGDIA-216ENST00000584397 CECR2Q9BXF3 1484 aa46.96■■■■■ 5.11
ARHGDIA-216ENST00000584397 SMARCA4P51532 1647 aa46.73■■■■■ 5.07
ARHGDIA-216ENST00000584397 BAZ1AQ9NRL2 1556 aaPredicted RBP46.7■■■■■ 5.07
ARHGDIA-216ENST00000584397 NCAPD3P42695 1498 aa46.51■■■■■ 5.04
ARHGDIA-216ENST00000584397 ATAD2BQ9ULI0 1458 aa46.51■■■■■ 5.04
ARHGDIA-216ENST00000584397 MROH2BQ7Z745 1585 aa46.46■■■■■ 5.03
ARHGDIA-216ENST00000584397 SMARCA2P51531 1590 aa46.42■■■■■ 5.02
ARHGDIA-216ENST00000584397 PEG3Q9GZU2 1588 aa46.36■■■■■ 5.01
ARHGDIA-216ENST00000584397 HMGXB3Q12766 1538 aa46.23■■■■■ 4.99
ARHGDIA-216ENST00000584397 BAZ1BQ9UIG0 1483 aaKnown RBP46.06■■■■■ 4.96
ARHGDIA-216ENST00000584397 RSF1Q96T23 1441 aaPredicted RBP46.01■■■■■ 4.96
ARHGDIA-216ENST00000584397 WIZO95785 1651 aa45.9■■■■■ 4.94
ARHGDIA-216ENST00000584397 TOP2AP11388 1531 aaKnown RBP45.47■■■■■ 4.87
ARHGDIA-216ENST00000584397 NESP48681 1621 aa45.26■■■■■ 4.84
ARHGDIA-216ENST00000584397 LAMC3Q9Y6N6 1575 aa45.18■■■■■ 4.82
ARHGDIA-216ENST00000584397 CADPSQ9ULU8 1353 aa45.13■■■■■ 4.82
ARHGDIA-216ENST00000584397 ERCC6Q03468 1493 aa44.98■■■■■ 4.79
ARHGDIA-216ENST00000584397 CCDC88BA6NC98 1476 aa44.96■■■■■ 4.79
ARHGDIA-216ENST00000584397 CFTRP13569 1480 aa44.9■■■■■ 4.78
ARHGDIA-216ENST00000584397 PDS5BQ9NTI5 1447 aa44.89■■■■■ 4.78
ARHGDIA-216ENST00000584397 SUPT5HO00267 1087 aaKnown RBP44.75■■■■■ 4.75
ARHGDIA-216ENST00000584397 KIF21AQ7Z4S6 1674 aa44.66■■■■■ 4.74
ARHGDIA-216ENST00000584397 CUX2O14529 1486 aa44.58■■■■■ 4.73
ARHGDIA-216ENST00000584397 THOC2Q8NI27 1593 aaKnown RBP44.56■■■■■ 4.72
ARHGDIA-216ENST00000584397 FANCD2Q9BXW9 1451 aa44.55■■■■■ 4.72
ARHGDIA-216ENST00000584397 CEP164Q9UPV0 1460 aa44.47■■■■■ 4.71
ARHGDIA-216ENST00000584397 PRDM2Q13029 1718 aa44.41■■■■■ 4.7
ARHGDIA-216ENST00000584397 MRC2Q9UBG0 1479 aa44.4■■■■■ 4.7
ARHGDIA-216ENST00000584397 WDR62O43379 1518 aa44.29■■■■■ 4.68
ARHGDIA-216ENST00000584397 URB2Q14146 1524 aaKnown RBP44.13■■■■■ 4.65
ARHGDIA-216ENST00000584397 ABCC8Q09428 1581 aa43.89■■■■■ 4.62
ARHGDIA-216ENST00000584397 TOPBP1Q92547 1522 aa43.86■■■■■ 4.61
ARHGDIA-216ENST00000584397 DNMBPQ6XZF7 1577 aa43.8■■■■■ 4.6
ARHGDIA-216ENST00000584397 CUX1P39880 1505 aa43.58■■■■■ 4.57
ARHGDIA-216ENST00000584397 IFT140Q96RY7 1462 aa43.57■■■■■ 4.57
ARHGDIA-216ENST00000584397 POLA1P09884 1462 aaPredicted RBP43.51■■■■■ 4.56
ARHGDIA-216ENST00000584397 TARBP1Q13395 1621 aaKnown RBP43.39■■■■■ 4.54
ARHGDIA-216ENST00000584397 FGD5Q6ZNL6 1462 aa43.38■■■■■ 4.54
ARHGDIA-216ENST00000584397 ZNF608Q9ULD9 1512 aaPredicted RBP43.36■■■■■ 4.53
ARHGDIA-216ENST00000584397 SOGA1O94964 1423 aa43.31■■■■■ 4.52
ARHGDIA-216ENST00000584397 WRNQ14191 1432 aaPredicted RBP eCLIP43.31■■■■■ 4.52
ARHGDIA-216ENST00000584397 RAD54L2Q9Y4B4 1467 aa43.29■■■■■ 4.52
ARHGDIA-216ENST00000584397 TOP2BQ02880 1626 aa43.22■■■■■ 4.51
ARHGDIA-216ENST00000584397 BIVM-ERCC5R4GMW8 1640 aa43.2■■■■■ 4.51
ARHGDIA-216ENST00000584397 SYNJ1O43426 1573 aa43.19■■■■■ 4.5
ARHGDIA-216ENST00000584397 DNAJC5Q9H3Z4 198 aa43.14■■■■■ 4.5
ARHGDIA-216ENST00000584397 EIF4G3O43432 1585 aaKnown RBP43.14■■■■■ 4.5
ARHGDIA-216ENST00000584397 AQRO60306 1485 aaKnown RBP eCLIP43.12■■■■■ 4.491e-7■■■□□ 15.2
ARHGDIA-216ENST00000584397 WDR97A6NE52 1622 aa43.07■■■■■ 4.48
ARHGDIA-216ENST00000584397 TDRD9Q8NDG6 1382 aaKnown RBP43.04■■■■■ 4.48
ARHGDIA-216ENST00000584397 ABCA10Q8WWZ4 1543 aa43.02■■■■■ 4.48
ARHGDIA-216ENST00000584397 GAPVD1Q14C86 1478 aa42.81■■■■■ 4.44
ARHGDIA-216ENST00000584397 ABCA5Q8WWZ7 1642 aa42.81■■■■■ 4.44
ARHGDIA-216ENST00000584397 GRIN2BQ13224 1484 aa42.81■■■■■ 4.44
ARHGDIA-216ENST00000584397 OSCARQ8IYS5 282 aa42.74■■■■■ 4.43
ARHGDIA-216ENST00000584397 SNAPC4Q5SXM2 1469 aa42.69■■■■■ 4.42
ARHGDIA-216ENST00000584397 MAGI1Q96QZ7 1491 aaPredicted RBP42.69■■■■■ 4.42
ARHGDIA-216ENST00000584397 PBRM1Q86U86 1689 aa42.63■■■■■ 4.41
ARHGDIA-216ENST00000584397 CHD1O14646 1710 aa42.53■■■■■ 4.4
ARHGDIA-216ENST00000584397 SYNJ2O15056 1496 aa42.52■■■■■ 4.4
ARHGDIA-216ENST00000584397 ERICH3Q5RHP9 1530 aa42.5■■■■■ 4.39
ARHGDIA-216ENST00000584397 FBLN2P98095 1184 aa42.47■■■■■ 4.39
ARHGDIA-216ENST00000584397 CHMP7Q8WUX9 453 aaPredicted RBP42.45■■■■■ 4.39
ARHGDIA-216ENST00000584397 KIF27Q86VH2 1401 aa42.4■■■■■ 4.38
ARHGDIA-216ENST00000584397 ADAMTS12P58397 1594 aa42.37■■■■■ 4.37
ARHGDIA-216ENST00000584397 FHAD1B1AJZ9 1412 aa42.35■■■■■ 4.37
ARHGDIA-216ENST00000584397 TRIM41Q8WV44 630 aa42.31■■■■■ 4.36
ARHGDIA-216ENST00000584397 IGF1RP08069 1367 aa42.29■■■■■ 4.36
ARHGDIA-216ENST00000584397 GRIN2AQ12879 1464 aa42.25■■■■■ 4.35
ARHGDIA-216ENST00000584397 CLASP1Q7Z460 1538 aa42.2■■■■■ 4.35
ARHGDIA-216ENST00000584397 NUP160Q12769 1436 aa42.12■■■■■ 4.33
ARHGDIA-216ENST00000584397 CUL7Q14999 1698 aa42.07■■■■■ 4.33
ARHGDIA-216ENST00000584397 RUSC2Q8N2Y8 1516 aa42.05■■■■■ 4.32
ARHGDIA-216ENST00000584397 CEP170Q5SW79 1584 aa42.02■■■■■ 4.32
ARHGDIA-216ENST00000584397 ARHGEF11O15085 1522 aa42.02■■■■■ 4.32
ARHGDIA-216ENST00000584397 CARMIL1Q5VZK9 1371 aa42■■■■■ 4.31
ARHGDIA-216ENST00000584397 RIMBP3CA6NJZ7 1639 aa41.98■■■■■ 4.31
ARHGDIA-216ENST00000584397 RIMBP3BA6NNM3 1639 aa41.98■■■■■ 4.31
ARHGDIA-216ENST00000584397 RIMBP3Q9UFD9 1639 aa41.98■■■■■ 4.31
ARHGDIA-216ENST00000584397 CHIC1Q5VXU3 224 aa41.93■■■■■ 4.3
ARHGDIA-216ENST00000584397 SHROOM2Q13796 1616 aa41.75■■■■■ 4.27
ARHGDIA-216ENST00000584397 RAPGEF2Q9Y4G8 1499 aa41.73■■■■■ 4.27
ARHGDIA-216ENST00000584397 KIAA0586Q9BVV6 1533 aa41.72■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms