RNA–Protein interactions for RNA: ENST00000442738.6

POLR2F-205, Transcript of RNA polymerase II subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2F, Length 2,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-205ENST00000442738 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
POLR2F-205ENST00000442738 CCDC180Q9P1Z9 1646 aa38.59■■■■□ 3.77
POLR2F-205ENST00000442738 ZCCHC6Q5VYS8 1495 aaKnown RBP37.93■■■■□ 3.66
POLR2F-205ENST00000442738 SHROOM4Q9ULL8 1493 aa37.37■■■■□ 3.57
POLR2F-205ENST00000442738 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
POLR2F-205ENST00000442738 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
POLR2F-205ENST00000442738 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
POLR2F-205ENST00000442738 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
POLR2F-205ENST00000442738 ABCC9O60706 1549 aa35.72■■■■□ 3.31
POLR2F-205ENST00000442738 NACADO15069 1562 aa35.7■■■■□ 3.3
POLR2F-205ENST00000442738 SCRIBQ14160 1630 aa35.66■■■■□ 3.3
POLR2F-205ENST00000442738 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
POLR2F-205ENST00000442738 RSF1Q96T23 1441 aaPredicted RBP35.25■■■■□ 3.23
POLR2F-205ENST00000442738 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
POLR2F-205ENST00000442738 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
POLR2F-205ENST00000442738 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
POLR2F-205ENST00000442738 BAZ1AQ9NRL2 1556 aaPredicted RBP34.56■■■■□ 3.12
POLR2F-205ENST00000442738 WIZO95785 1651 aa34.5■■■■□ 3.11
POLR2F-205ENST00000442738 UNC13AQ9UPW8 1703 aa34.49■■■■□ 3.11
POLR2F-205ENST00000442738 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
POLR2F-205ENST00000442738 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
POLR2F-205ENST00000442738 LOC105371045A0A1W2PR82 267 aa34.22■■■■□ 3.07
POLR2F-205ENST00000442738 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
POLR2F-205ENST00000442738 EIF4G1Q04637 1599 aaKnown RBP34.08■■■■□ 3.05
POLR2F-205ENST00000442738 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
POLR2F-205ENST00000442738 SMARCA2P51531 1590 aa33.88■■■■□ 3.01
POLR2F-205ENST00000442738 CCDC88BA6NC98 1476 aa33.84■■■■□ 3.01
POLR2F-205ENST00000442738 PCGF6Q9BYE7 350 aa33.82■■■■□ 3
POLR2F-205ENST00000442738 PEG3Q9GZU2 1588 aa33.82■■■■□ 3
POLR2F-205ENST00000442738 HRCP23327 699 aa33.78■■■■□ 3
POLR2F-205ENST00000442738 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
POLR2F-205ENST00000442738 FAM9AQ8IZU1 332 aaPredicted RBP33.63■■■□□ 2.97
POLR2F-205ENST00000442738 TRIM26Q12899 539 aaPredicted RBP33.56■■■□□ 2.96
POLR2F-205ENST00000442738 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
POLR2F-205ENST00000442738 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
POLR2F-205ENST00000442738 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
POLR2F-205ENST00000442738 EEA1Q15075 1411 aa33.26■■■□□ 2.91
POLR2F-205ENST00000442738 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
POLR2F-205ENST00000442738 EHMT2Q96KQ7 1210 aa33.1■■■□□ 2.89
POLR2F-205ENST00000442738 SOGA1O94964 1423 aa33.09■■■□□ 2.89
POLR2F-205ENST00000442738 HMGXB3Q12766 1538 aa33■■■□□ 2.87
POLR2F-205ENST00000442738 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
POLR2F-205ENST00000442738 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
POLR2F-205ENST00000442738 TNIKQ9UKE5 1360 aa32.96■■■□□ 2.87
POLR2F-205ENST00000442738 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.86
POLR2F-205ENST00000442738 RUSC2Q8N2Y8 1516 aa32.89■■■□□ 2.86
POLR2F-205ENST00000442738 CEP162Q5TB80 1403 aa32.86■■■□□ 2.85
POLR2F-205ENST00000442738 GOLGA3Q08378 1498 aa32.84■■■□□ 2.85
POLR2F-205ENST00000442738 ZEB1P37275 1124 aaPredicted RBP32.81■■■□□ 2.84
POLR2F-205ENST00000442738 PPARGC1BQ86YN6 1023 aaKnown RBP32.78■■■□□ 2.84
POLR2F-205ENST00000442738 KIF21BO75037 1637 aa32.77■■■□□ 2.84
POLR2F-205ENST00000442738 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
POLR2F-205ENST00000442738 CEP164Q9UPV0 1460 aa32.73■■■□□ 2.83
POLR2F-205ENST00000442738 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
POLR2F-205ENST00000442738 UBTFP17480 764 aaKnown RBP32.6■■■□□ 2.81
POLR2F-205ENST00000442738 CFTRP13569 1480 aa32.54■■■□□ 2.8
POLR2F-205ENST00000442738 PRDM2Q13029 1718 aa32.43■■■□□ 2.78
POLR2F-205ENST00000442738 CUX1P39880 1505 aa32.39■■■□□ 2.78
POLR2F-205ENST00000442738 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
POLR2F-205ENST00000442738 ERICH3Q5RHP9 1530 aa32.35■■■□□ 2.77
POLR2F-205ENST00000442738 CLIP1P30622 1438 aa32.34■■■□□ 2.77
POLR2F-205ENST00000442738 PRXQ9BXM0 1461 aa32.28■■■□□ 2.76
POLR2F-205ENST00000442738 VPS8Q8N3P4 1428 aa32.24■■■□□ 2.75
POLR2F-205ENST00000442738 KIF27Q86VH2 1401 aa32.2■■■□□ 2.75
POLR2F-205ENST00000442738 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
POLR2F-205ENST00000442738 CC2D2AQ9P2K1 1620 aa32.18■■■□□ 2.74
POLR2F-205ENST00000442738 CCER1Q8TC90 406 aaPredicted RBP32.03■■■□□ 2.72
POLR2F-205ENST00000442738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.02■■■□□ 2.72
POLR2F-205ENST00000442738 TTBK1Q5TCY1 1321 aaPredicted RBP32■■■□□ 2.71
POLR2F-205ENST00000442738 APLP2Q06481 763 aa31.91■■■□□ 2.7
POLR2F-205ENST00000442738 ARAP1Q96P48 1450 aa31.9■■■□□ 2.7
POLR2F-205ENST00000442738 CUX2O14529 1486 aa31.86■■■□□ 2.69
POLR2F-205ENST00000442738 FGD5Q6ZNL6 1462 aa31.86■■■□□ 2.69
POLR2F-205ENST00000442738 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
POLR2F-205ENST00000442738 IGF1RP08069 1367 aa31.81■■■□□ 2.68
POLR2F-205ENST00000442738 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
POLR2F-205ENST00000442738 RANGAP1P46060 587 aaPredicted RBP31.72■■■□□ 2.67
POLR2F-205ENST00000442738 ARHGAP35Q9NRY4 1499 aa31.69■■■□□ 2.66
POLR2F-205ENST00000442738 CARMIL1Q5VZK9 1371 aa31.66■■■□□ 2.66
POLR2F-205ENST00000442738 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
POLR2F-205ENST00000442738 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
POLR2F-205ENST00000442738 TOPBP1Q92547 1522 aa31.62■■■□□ 2.65
POLR2F-205ENST00000442738 POLA1P09884 1462 aaPredicted RBP31.55■■■□□ 2.64
POLR2F-205ENST00000442738 NESP48681 1621 aa31.55■■■□□ 2.64
POLR2F-205ENST00000442738 HNRNPUL2Q1KMD3 747 aaKnown RBP31.53■■■□□ 2.64
POLR2F-205ENST00000442738 MAP3K1Q13233 1512 aa31.5■■■□□ 2.63
POLR2F-205ENST00000442738 RRBP1Q9P2E9 1410 aaKnown RBP31.47■■■□□ 2.63
POLR2F-205ENST00000442738 CUL7Q14999 1698 aa31.46■■■□□ 2.63
POLR2F-205ENST00000442738 KANK4Q5T7N3 995 aaPredicted RBP31.45■■■□□ 2.63
POLR2F-205ENST00000442738 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.63
POLR2F-205ENST00000442738 WDR97A6NE52 1622 aa31.41■■■□□ 2.62
POLR2F-205ENST00000442738 URB2Q14146 1524 aaKnown RBP31.38■■■□□ 2.61
POLR2F-205ENST00000442738 PDS5BQ9NTI5 1447 aa31.36■■■□□ 2.61
POLR2F-205ENST00000442738 TIAM1Q13009 1591 aa31.35■■■□□ 2.61
POLR2F-205ENST00000442738 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
POLR2F-205ENST00000442738 EFCAB5A4FU69 1503 aa31.31■■■□□ 2.6
POLR2F-205ENST00000442738 CLSPNQ9HAW4 1339 aa31.3■■■□□ 2.6
POLR2F-205ENST00000442738 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
POLR2F-205ENST00000442738 ABCA5Q8WWZ7 1642 aa31.26■■■□□ 2.6
POLR2F-205ENST00000442738 CCNB3Q8WWL7 1395 aa31.26■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms