RNA–Protein interactions for RNA: ENST00000583499.1

ARHGDIA-213, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-213ENST00000583499 NISCHQ9Y2I1 1504 aa59.02■■■■■ 7.04
ARHGDIA-213ENST00000583499 CCDC180Q9P1Z9 1646 aa52.58■■■■■ 6.01
ARHGDIA-213ENST00000583499 ABCC9O60706 1549 aa51.24■■■■■ 5.79
ARHGDIA-213ENST00000583499 RB1CC1Q8TDY2 1594 aa49.28■■■■■ 5.48
ARHGDIA-213ENST00000583499 ZCCHC6Q5VYS8 1495 aaKnown RBP49.27■■■■■ 5.48
ARHGDIA-213ENST00000583499 NACADO15069 1562 aa49.24■■■■■ 5.47
ARHGDIA-213ENST00000583499 MYO15BQ96JP2 1530 aa48.96■■■■■ 5.43
ARHGDIA-213ENST00000583499 DCAF8L2P0C7V8 631 aa48.82■■■■■ 5.41
ARHGDIA-213ENST00000583499 DCAF1Q9Y4B6 1507 aa48.82■■■■■ 5.41
ARHGDIA-213ENST00000583499 UNC13AQ9UPW8 1703 aa48.58■■■■■ 5.37
ARHGDIA-213ENST00000583499 BICRAQ9NZM4 1560 aa48.05■■■■■ 5.28
ARHGDIA-213ENST00000583499 SCRIBQ14160 1630 aa47.98■■■■■ 5.27
ARHGDIA-213ENST00000583499 PABPN1Q86U42 306 aaKnown RBP eCLIP47.74■■■■■ 5.23
ARHGDIA-213ENST00000583499 SHROOM4Q9ULL8 1493 aa47.27■■■■■ 5.16
ARHGDIA-213ENST00000583499 DNAJC5BQ9UF47 199 aa46.97■■■■■ 5.11
ARHGDIA-213ENST00000583499 EIF4G1Q04637 1599 aaKnown RBP46.64■■■■■ 5.06
ARHGDIA-213ENST00000583499 CC2D2AQ9P2K1 1620 aa46.45■■■■■ 5.03
ARHGDIA-213ENST00000583499 CECR2Q9BXF3 1484 aa46.05■■■■■ 4.96
ARHGDIA-213ENST00000583499 SMARCA4P51532 1647 aa45.89■■■■■ 4.94
ARHGDIA-213ENST00000583499 BAZ1AQ9NRL2 1556 aaPredicted RBP45.69■■■■■ 4.9
ARHGDIA-213ENST00000583499 MROH2BQ7Z745 1585 aa45.57■■■■■ 4.89
ARHGDIA-213ENST00000583499 ATAD2BQ9ULI0 1458 aa45.49■■■■■ 4.87
ARHGDIA-213ENST00000583499 PEG3Q9GZU2 1588 aa45.42■■■■■ 4.86
ARHGDIA-213ENST00000583499 NCAPD3P42695 1498 aa45.39■■■■■ 4.86
ARHGDIA-213ENST00000583499 SMARCA2P51531 1590 aa45.39■■■■■ 4.86
ARHGDIA-213ENST00000583499 HMGXB3Q12766 1538 aa45.31■■■■■ 4.84
ARHGDIA-213ENST00000583499 WIZO95785 1651 aa45.15■■■■■ 4.82
ARHGDIA-213ENST00000583499 BAZ1BQ9UIG0 1483 aaKnown RBP45.07■■■■■ 4.81
ARHGDIA-213ENST00000583499 RSF1Q96T23 1441 aaPredicted RBP44.94■■■■■ 4.79
ARHGDIA-213ENST00000583499 TOP2AP11388 1531 aaKnown RBP44.58■■■■■ 4.73
ARHGDIA-213ENST00000583499 NESP48681 1621 aa44.46■■■■■ 4.71
ARHGDIA-213ENST00000583499 LAMC3Q9Y6N6 1575 aa44.26■■■■■ 4.68
ARHGDIA-213ENST00000583499 KIF21AQ7Z4S6 1674 aa44.08■■■■■ 4.65
ARHGDIA-213ENST00000583499 ERCC6Q03468 1493 aa44.01■■■■■ 4.64
ARHGDIA-213ENST00000583499 CADPSQ9ULU8 1353 aa43.99■■■■■ 4.63
ARHGDIA-213ENST00000583499 CCDC88BA6NC98 1476 aa43.97■■■■■ 4.63
ARHGDIA-213ENST00000583499 THOC2Q8NI27 1593 aaKnown RBP43.91■■■■■ 4.62
ARHGDIA-213ENST00000583499 CFTRP13569 1480 aa43.86■■■■■ 4.61
ARHGDIA-213ENST00000583499 PRDM2Q13029 1718 aa43.84■■■■■ 4.61
ARHGDIA-213ENST00000583499 PDS5BQ9NTI5 1447 aa43.73■■■■■ 4.59
ARHGDIA-213ENST00000583499 CUX2O14529 1486 aa43.6■■■■■ 4.57
ARHGDIA-213ENST00000583499 FANCD2Q9BXW9 1451 aa43.59■■■■■ 4.57
ARHGDIA-213ENST00000583499 SUPT5HO00267 1087 aaKnown RBP43.58■■■■■ 4.57
ARHGDIA-213ENST00000583499 CEP164Q9UPV0 1460 aa43.52■■■■■ 4.56
ARHGDIA-213ENST00000583499 MRC2Q9UBG0 1479 aa43.48■■■■■ 4.55
ARHGDIA-213ENST00000583499 WDR62O43379 1518 aa43.45■■■■■ 4.55
ARHGDIA-213ENST00000583499 URB2Q14146 1524 aaKnown RBP43.3■■■■■ 4.52
ARHGDIA-213ENST00000583499 TOPBP1Q92547 1522 aa42.97■■■■■ 4.47
ARHGDIA-213ENST00000583499 DNMBPQ6XZF7 1577 aa42.95■■■■■ 4.47
ARHGDIA-213ENST00000583499 CUX1P39880 1505 aa42.76■■■■■ 4.44
ARHGDIA-213ENST00000583499 ABCC8Q09428 1581 aa42.73■■■■■ 4.43
ARHGDIA-213ENST00000583499 TARBP1Q13395 1621 aaKnown RBP42.63■■■■■ 4.41
ARHGDIA-213ENST00000583499 POLA1P09884 1462 aaPredicted RBP42.62■■■■■ 4.41
ARHGDIA-213ENST00000583499 IFT140Q96RY7 1462 aa42.57■■■■■ 4.41
ARHGDIA-213ENST00000583499 ZNF608Q9ULD9 1512 aaPredicted RBP42.55■■■■■ 4.4
ARHGDIA-213ENST00000583499 FGD5Q6ZNL6 1462 aa42.52■■■■■ 4.4
ARHGDIA-213ENST00000583499 EIF4G3O43432 1585 aaKnown RBP42.48■■■■■ 4.39
ARHGDIA-213ENST00000583499 SYNJ1O43426 1573 aa42.47■■■■■ 4.39
ARHGDIA-213ENST00000583499 BIVM-ERCC5R4GMW8 1640 aa42.46■■■■■ 4.39
ARHGDIA-213ENST00000583499 WDR97A6NE52 1622 aa42.45■■■■■ 4.39
ARHGDIA-213ENST00000583499 RAD54L2Q9Y4B4 1467 aa42.43■■■■■ 4.38
ARHGDIA-213ENST00000583499 TOP2BQ02880 1626 aa42.37■■■■■ 4.37
ARHGDIA-213ENST00000583499 WRNQ14191 1432 aaPredicted RBP eCLIP42.3■■■■■ 4.36
ARHGDIA-213ENST00000583499 SOGA1O94964 1423 aa42.25■■■■■ 4.35
ARHGDIA-213ENST00000583499 AQRO60306 1485 aaKnown RBP eCLIP42.18■■■■■ 4.341e-7■■■□□ 15.2
ARHGDIA-213ENST00000583499 ABCA5Q8WWZ7 1642 aa42.09■■■■■ 4.33
ARHGDIA-213ENST00000583499 ABCA10Q8WWZ4 1543 aa42.08■■■■■ 4.33
ARHGDIA-213ENST00000583499 TDRD9Q8NDG6 1382 aaKnown RBP42.05■■■■■ 4.32
ARHGDIA-213ENST00000583499 PBRM1Q86U86 1689 aa42.05■■■■■ 4.32
ARHGDIA-213ENST00000583499 DNAJC5Q9H3Z4 198 aa42.04■■■■■ 4.32
ARHGDIA-213ENST00000583499 CHD1O14646 1710 aa41.99■■■■■ 4.31
ARHGDIA-213ENST00000583499 SNAPC4Q5SXM2 1469 aa41.87■■■■■ 4.29
ARHGDIA-213ENST00000583499 GAPVD1Q14C86 1478 aa41.84■■■■■ 4.29
ARHGDIA-213ENST00000583499 GRIN2BQ13224 1484 aa41.81■■■■■ 4.28
ARHGDIA-213ENST00000583499 MAGI1Q96QZ7 1491 aaPredicted RBP41.73■■■■■ 4.27
ARHGDIA-213ENST00000583499 ADAMTS12P58397 1594 aa41.67■■■■■ 4.26
ARHGDIA-213ENST00000583499 SYNJ2O15056 1496 aa41.57■■■■■ 4.25
ARHGDIA-213ENST00000583499 ERICH3Q5RHP9 1530 aa41.55■■■■■ 4.24
ARHGDIA-213ENST00000583499 OSCARQ8IYS5 282 aa41.52■■■■■ 4.24
ARHGDIA-213ENST00000583499 CLASP1Q7Z460 1538 aa41.46■■■■■ 4.23
ARHGDIA-213ENST00000583499 FBLN2P98095 1184 aa41.38■■■■■ 4.21
ARHGDIA-213ENST00000583499 GRIN2AQ12879 1464 aa41.36■■■■■ 4.21
ARHGDIA-213ENST00000583499 FHAD1B1AJZ9 1412 aa41.33■■■■■ 4.21
ARHGDIA-213ENST00000583499 RIMBP3CA6NJZ7 1639 aa41.33■■■■■ 4.21
ARHGDIA-213ENST00000583499 RIMBP3BA6NNM3 1639 aa41.33■■■■■ 4.21
ARHGDIA-213ENST00000583499 RIMBP3Q9UFD9 1639 aa41.33■■■■■ 4.21
ARHGDIA-213ENST00000583499 KIF27Q86VH2 1401 aa41.32■■■■■ 4.21
ARHGDIA-213ENST00000583499 CEP170Q5SW79 1584 aa41.32■■■■■ 4.2
ARHGDIA-213ENST00000583499 CHMP7Q8WUX9 453 aaPredicted RBP41.27■■■■■ 4.2
ARHGDIA-213ENST00000583499 CUL7Q14999 1698 aa41.26■■■■■ 4.2
ARHGDIA-213ENST00000583499 ARHGEF11O15085 1522 aa41.24■■■■■ 4.19
ARHGDIA-213ENST00000583499 RUSC2Q8N2Y8 1516 aa41.24■■■■■ 4.19
ARHGDIA-213ENST00000583499 NUP160Q12769 1436 aa41.19■■■■■ 4.18
ARHGDIA-213ENST00000583499 IGF1RP08069 1367 aa41.19■■■■■ 4.18
ARHGDIA-213ENST00000583499 TRIM41Q8WV44 630 aa41.05■■■■■ 4.16
ARHGDIA-213ENST00000583499 SHROOM2Q13796 1616 aa41.04■■■■■ 4.16
ARHGDIA-213ENST00000583499 ARAP1Q96P48 1450 aa40.96■■■■■ 4.15
ARHGDIA-213ENST00000583499 ERCC6L2Q5T890 1561 aa40.96■■■■■ 4.15
ARHGDIA-213ENST00000583499 CARMIL1Q5VZK9 1371 aa40.89■■■■■ 4.14
ARHGDIA-213ENST00000583499 CHIC1Q5VXU3 224 aa40.79■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms