RNA–Protein interactions for RNA: ENST00000368465.5

PBXIP1-203, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PBXIP1, Length 3,144 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-203ENST00000368465 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
PBXIP1-203ENST00000368465 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
PBXIP1-203ENST00000368465 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
PBXIP1-203ENST00000368465 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
PBXIP1-203ENST00000368465 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
PBXIP1-203ENST00000368465 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
PBXIP1-203ENST00000368465 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
PBXIP1-203ENST00000368465 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
PBXIP1-203ENST00000368465 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
PBXIP1-203ENST00000368465 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.24
PBXIP1-203ENST00000368465 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
PBXIP1-203ENST00000368465 ABCC9O60706 1549 aa22.75■■□□□ 1.23
PBXIP1-203ENST00000368465 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
PBXIP1-203ENST00000368465 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
PBXIP1-203ENST00000368465 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
PBXIP1-203ENST00000368465 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
PBXIP1-203ENST00000368465 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PBXIP1-203ENST00000368465 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
PBXIP1-203ENST00000368465 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.16
PBXIP1-203ENST00000368465 HRCP23327 699 aa22.32■■□□□ 1.16
PBXIP1-203ENST00000368465 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
PBXIP1-203ENST00000368465 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
PBXIP1-203ENST00000368465 NACADO15069 1562 aa22.08■■□□□ 1.13
PBXIP1-203ENST00000368465 WIZO95785 1651 aa22.04■■□□□ 1.12
PBXIP1-203ENST00000368465 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
PBXIP1-203ENST00000368465 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
PBXIP1-203ENST00000368465 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
PBXIP1-203ENST00000368465 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
PBXIP1-203ENST00000368465 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.06
PBXIP1-203ENST00000368465 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
PBXIP1-203ENST00000368465 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
PBXIP1-203ENST00000368465 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
PBXIP1-203ENST00000368465 SOGA1O94964 1423 aa21.45■■□□□ 1.02
PBXIP1-203ENST00000368465 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
PBXIP1-203ENST00000368465 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
PBXIP1-203ENST00000368465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
PBXIP1-203ENST00000368465 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
PBXIP1-203ENST00000368465 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
PBXIP1-203ENST00000368465 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
PBXIP1-203ENST00000368465 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
PBXIP1-203ENST00000368465 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
PBXIP1-203ENST00000368465 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
PBXIP1-203ENST00000368465 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
PBXIP1-203ENST00000368465 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
PBXIP1-203ENST00000368465 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
PBXIP1-203ENST00000368465 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
PBXIP1-203ENST00000368465 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
PBXIP1-203ENST00000368465 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
PBXIP1-203ENST00000368465 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
PBXIP1-203ENST00000368465 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
PBXIP1-203ENST00000368465 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
PBXIP1-203ENST00000368465 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
PBXIP1-203ENST00000368465 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
PBXIP1-203ENST00000368465 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
PBXIP1-203ENST00000368465 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
PBXIP1-203ENST00000368465 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
PBXIP1-203ENST00000368465 EEA1Q15075 1411 aa20.84■□□□□ 0.93
PBXIP1-203ENST00000368465 CLIP1P30622 1438 aa20.81■□□□□ 0.92
PBXIP1-203ENST00000368465 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.91
PBXIP1-203ENST00000368465 APLP2Q06481 763 aa20.74■□□□□ 0.91
PBXIP1-203ENST00000368465 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
PBXIP1-203ENST00000368465 KIF21BO75037 1637 aa20.62■□□□□ 0.89
PBXIP1-203ENST00000368465 KANK4Q5T7N3 995 aaPredicted RBP20.6■□□□□ 0.89
PBXIP1-203ENST00000368465 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
PBXIP1-203ENST00000368465 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
PBXIP1-203ENST00000368465 ITGAEP38570 1179 aa20.58■□□□□ 0.88
PBXIP1-203ENST00000368465 CUX1P39880 1505 aa20.57■□□□□ 0.88
PBXIP1-203ENST00000368465 MYT1Q01538 1121 aa20.56■□□□□ 0.88
PBXIP1-203ENST00000368465 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
PBXIP1-203ENST00000368465 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
PBXIP1-203ENST00000368465 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
PBXIP1-203ENST00000368465 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
PBXIP1-203ENST00000368465 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
PBXIP1-203ENST00000368465 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
PBXIP1-203ENST00000368465 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
PBXIP1-203ENST00000368465 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
PBXIP1-203ENST00000368465 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
PBXIP1-203ENST00000368465 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
PBXIP1-203ENST00000368465 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
PBXIP1-203ENST00000368465 CFTRP13569 1480 aa20.41■□□□□ 0.86
PBXIP1-203ENST00000368465 CUX2O14529 1486 aa20.38■□□□□ 0.85
PBXIP1-203ENST00000368465 ACIN1Q9UKV3 1341 aaKnown RBP20.38■□□□□ 0.85
PBXIP1-203ENST00000368465 MIER1Q8N108 512 aa20.34■□□□□ 0.85
PBXIP1-203ENST00000368465 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
PBXIP1-203ENST00000368465 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
PBXIP1-203ENST00000368465 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
PBXIP1-203ENST00000368465 IGF1RP08069 1367 aa20.29■□□□□ 0.84
PBXIP1-203ENST00000368465 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
PBXIP1-203ENST00000368465 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
PBXIP1-203ENST00000368465 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
PBXIP1-203ENST00000368465 NESP48681 1621 aa20.25■□□□□ 0.83
PBXIP1-203ENST00000368465 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
PBXIP1-203ENST00000368465 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
PBXIP1-203ENST00000368465 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
PBXIP1-203ENST00000368465 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
PBXIP1-203ENST00000368465 DHX57Q6P158 1386 aaKnown RBP20.19■□□□□ 0.82
PBXIP1-203ENST00000368465 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
PBXIP1-203ENST00000368465 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
PBXIP1-203ENST00000368465 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
PBXIP1-203ENST00000368465 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms