RNA–Protein interactions for RNA: ENST00000611786.4

ATRAID-208, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-208ENST00000611786 NISCHQ9Y2I1 1504 aa49.09■■■■■ 5.45
ATRAID-208ENST00000611786 CCDC180Q9P1Z9 1646 aa43.59■■■■■ 4.57
ATRAID-208ENST00000611786 ABCC9O60706 1549 aa42.42■■■■■ 4.38
ATRAID-208ENST00000611786 NACADO15069 1562 aa40.94■■■■■ 4.14
ATRAID-208ENST00000611786 RB1CC1Q8TDY2 1594 aa40.93■■■■■ 4.14
ATRAID-208ENST00000611786 ZCCHC6Q5VYS8 1495 aaKnown RBP40.91■■■■■ 4.14
ATRAID-208ENST00000611786 DCAF8L2P0C7V8 631 aa40.88■■■■■ 4.13
ATRAID-208ENST00000611786 MYO15BQ96JP2 1530 aa40.78■■■■■ 4.12
ATRAID-208ENST00000611786 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
ATRAID-208ENST00000611786 UNC13AQ9UPW8 1703 aa40.02■■■■■ 4
ATRAID-208ENST00000611786 SCRIBQ14160 1630 aa39.73■■■■□ 3.95
ATRAID-208ENST00000611786 BICRAQ9NZM4 1560 aa39.69■■■■□ 3.94
ATRAID-208ENST00000611786 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
ATRAID-208ENST00000611786 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
ATRAID-208ENST00000611786 DNAJC5BQ9UF47 199 aa38.82■■■■□ 3.8
ATRAID-208ENST00000611786 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
ATRAID-208ENST00000611786 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
ATRAID-208ENST00000611786 CECR2Q9BXF3 1484 aa38.19■■■■□ 3.7
ATRAID-208ENST00000611786 SMARCA4P51532 1647 aa38.05■■■■□ 3.68
ATRAID-208ENST00000611786 BAZ1AQ9NRL2 1556 aaPredicted RBP38.03■■■■□ 3.68
ATRAID-208ENST00000611786 MROH2BQ7Z745 1585 aa37.81■■■■□ 3.64
ATRAID-208ENST00000611786 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
ATRAID-208ENST00000611786 NCAPD3P42695 1498 aa37.77■■■■□ 3.64
ATRAID-208ENST00000611786 SMARCA2P51531 1590 aa37.76■■■■□ 3.64
ATRAID-208ENST00000611786 PEG3Q9GZU2 1588 aa37.71■■■■□ 3.63
ATRAID-208ENST00000611786 HMGXB3Q12766 1538 aa37.59■■■■□ 3.61
ATRAID-208ENST00000611786 BAZ1BQ9UIG0 1483 aaKnown RBP37.48■■■■□ 3.59
ATRAID-208ENST00000611786 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
ATRAID-208ENST00000611786 WIZO95785 1651 aa37.41■■■■□ 3.58
ATRAID-208ENST00000611786 TOP2AP11388 1531 aaKnown RBP37.03■■■■□ 3.52
ATRAID-208ENST00000611786 NESP48681 1621 aa36.77■■■■□ 3.48
ATRAID-208ENST00000611786 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
ATRAID-208ENST00000611786 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
ATRAID-208ENST00000611786 CCDC88BA6NC98 1476 aa36.6■■■■□ 3.45
ATRAID-208ENST00000611786 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
ATRAID-208ENST00000611786 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
ATRAID-208ENST00000611786 CFTRP13569 1480 aa36.5■■■■□ 3.43
ATRAID-208ENST00000611786 PDS5BQ9NTI5 1447 aa36.49■■■■□ 3.43
ATRAID-208ENST00000611786 KIF21AQ7Z4S6 1674 aa36.36■■■■□ 3.41
ATRAID-208ENST00000611786 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
ATRAID-208ENST00000611786 FANCD2Q9BXW9 1451 aa36.23■■■■□ 3.39
ATRAID-208ENST00000611786 THOC2Q8NI27 1593 aaKnown RBP36.2■■■■□ 3.39
ATRAID-208ENST00000611786 CUX2O14529 1486 aa36.16■■■■□ 3.38
ATRAID-208ENST00000611786 CEP164Q9UPV0 1460 aa36.16■■■■□ 3.38
ATRAID-208ENST00000611786 MRC2Q9UBG0 1479 aa36.09■■■■□ 3.37
ATRAID-208ENST00000611786 WDR62O43379 1518 aa35.98■■■■□ 3.35
ATRAID-208ENST00000611786 URB2Q14146 1524 aaKnown RBP35.86■■■■□ 3.33
ATRAID-208ENST00000611786 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
ATRAID-208ENST00000611786 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
ATRAID-208ENST00000611786 DNMBPQ6XZF7 1577 aa35.65■■■■□ 3.3
ATRAID-208ENST00000611786 CUX1P39880 1505 aa35.46■■■■□ 3.27
ATRAID-208ENST00000611786 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
ATRAID-208ENST00000611786 POLA1P09884 1462 aaPredicted RBP35.38■■■■□ 3.25
ATRAID-208ENST00000611786 FGD5Q6ZNL6 1462 aa35.3■■■■□ 3.24
ATRAID-208ENST00000611786 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
ATRAID-208ENST00000611786 WRNQ14191 1432 aaPredicted RBP eCLIP35.29■■■■□ 3.24
ATRAID-208ENST00000611786 SOGA1O94964 1423 aa35.24■■■■□ 3.23
ATRAID-208ENST00000611786 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
ATRAID-208ENST00000611786 TOP2BQ02880 1626 aa35.22■■■■□ 3.23
ATRAID-208ENST00000611786 BIVM-ERCC5R4GMW8 1640 aa35.21■■■■□ 3.23
ATRAID-208ENST00000611786 RAD54L2Q9Y4B4 1467 aa35.21■■■■□ 3.23
ATRAID-208ENST00000611786 SYNJ1O43426 1573 aa35.2■■■■□ 3.23
ATRAID-208ENST00000611786 EIF4G3O43432 1585 aaKnown RBP35.1■■■■□ 3.21
ATRAID-208ENST00000611786 AQRO60306 1485 aaKnown RBP eCLIP35.05■■■■□ 3.22e-7■■■□□ 15.2
ATRAID-208ENST00000611786 WDR97A6NE52 1622 aa35.05■■■■□ 3.2
ATRAID-208ENST00000611786 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
ATRAID-208ENST00000611786 ABCA10Q8WWZ4 1543 aa35■■■■□ 3.19
ATRAID-208ENST00000611786 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
ATRAID-208ENST00000611786 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
ATRAID-208ENST00000611786 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
ATRAID-208ENST00000611786 GRIN2BQ13224 1484 aa34.81■■■■□ 3.16
ATRAID-208ENST00000611786 PBRM1Q86U86 1689 aa34.76■■■■□ 3.15
ATRAID-208ENST00000611786 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
ATRAID-208ENST00000611786 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
ATRAID-208ENST00000611786 OSCARQ8IYS5 282 aa34.69■■■■□ 3.14
ATRAID-208ENST00000611786 CHD1O14646 1710 aa34.64■■■■□ 3.14
ATRAID-208ENST00000611786 ERICH3Q5RHP9 1530 aa34.59■■■■□ 3.13
ATRAID-208ENST00000611786 SYNJ2O15056 1496 aa34.58■■■■□ 3.13
ATRAID-208ENST00000611786 FBLN2P98095 1184 aa34.57■■■■□ 3.12
ATRAID-208ENST00000611786 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
ATRAID-208ENST00000611786 KIF27Q86VH2 1401 aa34.55■■■■□ 3.12
ATRAID-208ENST00000611786 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
ATRAID-208ENST00000611786 ADAMTS12P58397 1594 aa34.48■■■■□ 3.11
ATRAID-208ENST00000611786 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.11
ATRAID-208ENST00000611786 IGF1RP08069 1367 aa34.4■■■■□ 3.1
ATRAID-208ENST00000611786 GRIN2AQ12879 1464 aa34.36■■■■□ 3.09
ATRAID-208ENST00000611786 CUL7Q14999 1698 aa34.31■■■■□ 3.08
ATRAID-208ENST00000611786 CLASP1Q7Z460 1538 aa34.27■■■■□ 3.08
ATRAID-208ENST00000611786 RUSC2Q8N2Y8 1516 aa34.26■■■■□ 3.08
ATRAID-208ENST00000611786 CHIC1Q5VXU3 224 aa34.25■■■■□ 3.07
ATRAID-208ENST00000611786 NUP160Q12769 1436 aa34.21■■■■□ 3.07
ATRAID-208ENST00000611786 CARMIL1Q5VZK9 1371 aa34.19■■■■□ 3.06
ATRAID-208ENST00000611786 CEP170Q5SW79 1584 aa34.18■■■■□ 3.06
ATRAID-208ENST00000611786 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
ATRAID-208ENST00000611786 RIMBP3CA6NJZ7 1639 aa34.1■■■■□ 3.05
ATRAID-208ENST00000611786 RIMBP3BA6NNM3 1639 aa34.1■■■■□ 3.05
ATRAID-208ENST00000611786 RIMBP3Q9UFD9 1639 aa34.1■■■■□ 3.05
ATRAID-208ENST00000611786 EEA1Q15075 1411 aa34.01■■■■□ 3.03
ATRAID-208ENST00000611786 RAPGEF2Q9Y4G8 1499 aa34.01■■■■□ 3.03
ATRAID-208ENST00000611786 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms