RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
POLR2F-209ENST00000483713 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
POLR2F-209ENST00000483713 ABCC9O60706 1549 aa31.59■■■□□ 2.65
POLR2F-209ENST00000483713 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
POLR2F-209ENST00000483713 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
POLR2F-209ENST00000483713 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
POLR2F-209ENST00000483713 NACADO15069 1562 aa30.89■■■□□ 2.54
POLR2F-209ENST00000483713 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
POLR2F-209ENST00000483713 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.52
POLR2F-209ENST00000483713 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
POLR2F-209ENST00000483713 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
POLR2F-209ENST00000483713 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
POLR2F-209ENST00000483713 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
POLR2F-209ENST00000483713 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
POLR2F-209ENST00000483713 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
POLR2F-209ENST00000483713 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
POLR2F-209ENST00000483713 EIF4G1Q04637 1599 aaKnown RBP28.95■■■□□ 2.22
POLR2F-209ENST00000483713 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
POLR2F-209ENST00000483713 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
POLR2F-209ENST00000483713 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
POLR2F-209ENST00000483713 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
POLR2F-209ENST00000483713 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
POLR2F-209ENST00000483713 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
POLR2F-209ENST00000483713 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
POLR2F-209ENST00000483713 WIZO95785 1651 aa28.53■■■□□ 2.16
POLR2F-209ENST00000483713 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
POLR2F-209ENST00000483713 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
POLR2F-209ENST00000483713 BAZ1BQ9UIG0 1483 aaKnown RBP28.38■■■□□ 2.13
POLR2F-209ENST00000483713 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
POLR2F-209ENST00000483713 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
POLR2F-209ENST00000483713 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
POLR2F-209ENST00000483713 CCDC88BA6NC98 1476 aa27.93■■■□□ 2.06
POLR2F-209ENST00000483713 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
POLR2F-209ENST00000483713 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
POLR2F-209ENST00000483713 CFTRP13569 1480 aa27.64■■■□□ 2.01
POLR2F-209ENST00000483713 PRDM2Q13029 1718 aa27.56■■■□□ 2
POLR2F-209ENST00000483713 NESP48681 1621 aa27.52■■■□□ 2
POLR2F-209ENST00000483713 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
POLR2F-209ENST00000483713 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
POLR2F-209ENST00000483713 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
POLR2F-209ENST00000483713 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
POLR2F-209ENST00000483713 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
POLR2F-209ENST00000483713 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
POLR2F-209ENST00000483713 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
POLR2F-209ENST00000483713 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
POLR2F-209ENST00000483713 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
POLR2F-209ENST00000483713 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
POLR2F-209ENST00000483713 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
POLR2F-209ENST00000483713 WDR62O43379 1518 aa27■■□□□ 1.91
POLR2F-209ENST00000483713 CUX1P39880 1505 aa27■■□□□ 1.91
POLR2F-209ENST00000483713 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
POLR2F-209ENST00000483713 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
POLR2F-209ENST00000483713 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
POLR2F-209ENST00000483713 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
POLR2F-209ENST00000483713 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
POLR2F-209ENST00000483713 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
POLR2F-209ENST00000483713 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
POLR2F-209ENST00000483713 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
POLR2F-209ENST00000483713 CUX2O14529 1486 aa26.74■■□□□ 1.87
POLR2F-209ENST00000483713 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
POLR2F-209ENST00000483713 SOGA1O94964 1423 aa26.66■■□□□ 1.86
POLR2F-209ENST00000483713 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
POLR2F-209ENST00000483713 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
POLR2F-209ENST00000483713 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
POLR2F-209ENST00000483713 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
POLR2F-209ENST00000483713 KIF27Q86VH2 1401 aa26.47■■□□□ 1.83
POLR2F-209ENST00000483713 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
POLR2F-209ENST00000483713 EEA1Q15075 1411 aa26.43■■□□□ 1.82
POLR2F-209ENST00000483713 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
POLR2F-209ENST00000483713 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
POLR2F-209ENST00000483713 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
POLR2F-209ENST00000483713 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
POLR2F-209ENST00000483713 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.815e-7■■■■■ 39.8
POLR2F-209ENST00000483713 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
POLR2F-209ENST00000483713 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
POLR2F-209ENST00000483713 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
POLR2F-209ENST00000483713 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
POLR2F-209ENST00000483713 IGF1RP08069 1367 aa26.23■■□□□ 1.79
POLR2F-209ENST00000483713 CUL7Q14999 1698 aa26.23■■□□□ 1.79
POLR2F-209ENST00000483713 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
POLR2F-209ENST00000483713 CSRNP3Q8WYN3 585 aa26.2■■□□□ 1.78
POLR2F-209ENST00000483713 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
POLR2F-209ENST00000483713 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
POLR2F-209ENST00000483713 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
POLR2F-209ENST00000483713 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
POLR2F-209ENST00000483713 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
POLR2F-209ENST00000483713 KIF21BO75037 1637 aa26.1■■□□□ 1.77
POLR2F-209ENST00000483713 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
POLR2F-209ENST00000483713 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
POLR2F-209ENST00000483713 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
POLR2F-209ENST00000483713 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
POLR2F-209ENST00000483713 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
POLR2F-209ENST00000483713 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
POLR2F-209ENST00000483713 CHD1O14646 1710 aa25.96■■□□□ 1.75
POLR2F-209ENST00000483713 FBLN2P98095 1184 aa25.89■■□□□ 1.74
POLR2F-209ENST00000483713 NUP160Q12769 1436 aa25.84■■□□□ 1.73
POLR2F-209ENST00000483713 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
POLR2F-209ENST00000483713 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
POLR2F-209ENST00000483713 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
POLR2F-209ENST00000483713 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms