RNA–Protein interactions for RNA: ENST00000405557.5

POLR2F-202, Transcript of RNA polymerase II subunit F, humanhuman

TSL 5 BASIC

Gene POLR2F, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-202ENST00000405557 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
POLR2F-202ENST00000405557 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
POLR2F-202ENST00000405557 ABCC9O60706 1549 aa27.21■■□□□ 1.95
POLR2F-202ENST00000405557 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
POLR2F-202ENST00000405557 NACADO15069 1562 aa26.33■■□□□ 1.81
POLR2F-202ENST00000405557 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
POLR2F-202ENST00000405557 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
POLR2F-202ENST00000405557 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
POLR2F-202ENST00000405557 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
POLR2F-202ENST00000405557 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
POLR2F-202ENST00000405557 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
POLR2F-202ENST00000405557 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
POLR2F-202ENST00000405557 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
POLR2F-202ENST00000405557 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
POLR2F-202ENST00000405557 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
POLR2F-202ENST00000405557 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
POLR2F-202ENST00000405557 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
POLR2F-202ENST00000405557 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
POLR2F-202ENST00000405557 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
POLR2F-202ENST00000405557 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
POLR2F-202ENST00000405557 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
POLR2F-202ENST00000405557 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
POLR2F-202ENST00000405557 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
POLR2F-202ENST00000405557 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
POLR2F-202ENST00000405557 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
POLR2F-202ENST00000405557 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
POLR2F-202ENST00000405557 WIZO95785 1651 aa24.27■■□□□ 1.48
POLR2F-202ENST00000405557 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
POLR2F-202ENST00000405557 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
POLR2F-202ENST00000405557 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
POLR2F-202ENST00000405557 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
POLR2F-202ENST00000405557 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
POLR2F-202ENST00000405557 NESP48681 1621 aa23.66■■□□□ 1.38
POLR2F-202ENST00000405557 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
POLR2F-202ENST00000405557 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
POLR2F-202ENST00000405557 CFTRP13569 1480 aa23.54■■□□□ 1.36
POLR2F-202ENST00000405557 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
POLR2F-202ENST00000405557 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
POLR2F-202ENST00000405557 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
POLR2F-202ENST00000405557 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
POLR2F-202ENST00000405557 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
POLR2F-202ENST00000405557 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
POLR2F-202ENST00000405557 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
POLR2F-202ENST00000405557 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
POLR2F-202ENST00000405557 WDR62O43379 1518 aa23.12■■□□□ 1.29
POLR2F-202ENST00000405557 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
POLR2F-202ENST00000405557 CUX2O14529 1486 aa23.06■■□□□ 1.28
POLR2F-202ENST00000405557 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
POLR2F-202ENST00000405557 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
POLR2F-202ENST00000405557 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
POLR2F-202ENST00000405557 CUX1P39880 1505 aa22.96■■□□□ 1.27
POLR2F-202ENST00000405557 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
POLR2F-202ENST00000405557 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
POLR2F-202ENST00000405557 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
POLR2F-202ENST00000405557 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
POLR2F-202ENST00000405557 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
POLR2F-202ENST00000405557 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
POLR2F-202ENST00000405557 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
POLR2F-202ENST00000405557 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
POLR2F-202ENST00000405557 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
POLR2F-202ENST00000405557 SOGA1O94964 1423 aa22.72■■□□□ 1.23
POLR2F-202ENST00000405557 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
POLR2F-202ENST00000405557 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
POLR2F-202ENST00000405557 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
POLR2F-202ENST00000405557 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
POLR2F-202ENST00000405557 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.25e-7■■■■■ 39.8
POLR2F-202ENST00000405557 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
POLR2F-202ENST00000405557 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
POLR2F-202ENST00000405557 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
POLR2F-202ENST00000405557 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
POLR2F-202ENST00000405557 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
POLR2F-202ENST00000405557 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
POLR2F-202ENST00000405557 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
POLR2F-202ENST00000405557 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
POLR2F-202ENST00000405557 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
POLR2F-202ENST00000405557 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
POLR2F-202ENST00000405557 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
POLR2F-202ENST00000405557 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
POLR2F-202ENST00000405557 CHD1O14646 1710 aa22.28■■□□□ 1.16
POLR2F-202ENST00000405557 IGF1RP08069 1367 aa22.27■■□□□ 1.16
POLR2F-202ENST00000405557 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
POLR2F-202ENST00000405557 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
POLR2F-202ENST00000405557 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
POLR2F-202ENST00000405557 CUL7Q14999 1698 aa22.18■■□□□ 1.14
POLR2F-202ENST00000405557 FBLN2P98095 1184 aa22.17■■□□□ 1.14
POLR2F-202ENST00000405557 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
POLR2F-202ENST00000405557 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
POLR2F-202ENST00000405557 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
POLR2F-202ENST00000405557 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
POLR2F-202ENST00000405557 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
POLR2F-202ENST00000405557 EEA1Q15075 1411 aa22.1■■□□□ 1.13
POLR2F-202ENST00000405557 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
POLR2F-202ENST00000405557 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
POLR2F-202ENST00000405557 NUP160Q12769 1436 aa22.05■■□□□ 1.12
POLR2F-202ENST00000405557 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
POLR2F-202ENST00000405557 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
POLR2F-202ENST00000405557 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
POLR2F-202ENST00000405557 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
POLR2F-202ENST00000405557 KIF21BO75037 1637 aa21.91■■□□□ 1.1
POLR2F-202ENST00000405557 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms