Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■■□ 21.8
U2AF2P26368 FN1-218ENST00000473614 568 ntTSL 28.28□□□□□ -1.083e-38■■■■□ 21.8
U2AF2P26368 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.611e-8■■■■□ 21.8
U2AF2P26368 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.682e-13■■■■□ 21.8
U2AF2P26368 ZHX1-C8orf76-202ENST00000622816 581 ntAPPRIS ALT2 TSL 418.59■□□□□ 0.571e-6■■■■□ 21.8
U2AF2P26368 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.462e-13■■■■□ 21.8
U2AF2P26368 TBX3-204ENST00000552054 1814 ntTSL 217.63■□□□□ 0.412e-10■■■■□ 21.8
U2AF2P26368 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.42e-13■■■■□ 21.8
U2AF2P26368 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.36■□□□□ 0.052e-10■■■■□ 21.8
U2AF2P26368 SPTLC3-202ENST00000431275 453 ntTSL 212.59□□□□□ -0.392e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC12.16□□□□□ -0.462e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC12.16□□□□□ -0.462e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC9.99□□□□□ -0.812e-10■■■■□ 21.8
U2AF2P26368 ACACA-244ENST00000619245 635 ntTSL 36.39□□□□□ -1.392e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.99□□□□□ -1.612e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-226ENST00000508635 587 ntTSL 43.84□□□□□ -1.792e-10■■■■□ 21.8
U2AF2P26368 UBE2D3-225ENST00000508476 601 ntTSL 32.45□□□□□ -2.022e-10■■■■□ 21.8
U2AF2P26368 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.68■■□□□ 1.542e-7■■■■□ 21.8
U2AF2P26368 CYHR1-212ENST00000533764 853 ntTSL 223.66■■□□□ 1.382e-7■■■■□ 21.8
U2AF2P26368 EDEM3-206ENST00000474725 1911 ntTSL 223.37■■□□□ 1.332e-7■■■■□ 21.8
U2AF2P26368 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.22■■□□□ 1.152e-7■■■■□ 21.8
U2AF2P26368 CYHR1-205ENST00000524623 592 ntTSL 1 (best)20.65■□□□□ 0.92e-7■■■■□ 21.8
U2AF2P26368 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.01■□□□□ 0.792e-7■■■■□ 21.8
U2AF2P26368 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.792e-7■■■■□ 21.8
U2AF2P26368 CYHR1-210ENST00000530637 581 ntTSL 319.71■□□□□ 0.752e-7■■■■□ 21.8
U2AF2P26368 CYHR1-206ENST00000526887 1012 ntTSL 319.33■□□□□ 0.682e-7■■■■□ 21.8
U2AF2P26368 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.12e-7■■■■□ 21.8
U2AF2P26368 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.032e-7■■■■□ 21.8
U2AF2P26368 HOXB8-202ENST00000498634 502 ntTSL 310.83□□□□□ -0.682e-7■■■■□ 21.8
U2AF2P26368 COPB2-203ENST00000503326 433 ntTSL 34.18□□□□□ -1.744e-8■■■■□ 21.8
U2AF2P26368 ACADVL-237ENST00000583858 1015 ntTSL 521.02■□□□□ 0.963e-13■■■■□ 21.8
U2AF2P26368 ACADVL-232ENST00000583074 410 ntTSL 520.78■□□□□ 0.928e-26■■■■□ 21.8
U2AF2P26368 ACADVL-236ENST00000583850 903 ntTSL 220.42■□□□□ 0.868e-26■■■■□ 21.8
U2AF2P26368 ACADVL-220ENST00000579546 582 ntTSL 519.86■□□□□ 0.773e-13■■■■□ 21.8
U2AF2P26368 ACADVL-204ENST00000542255 1016 ntTSL 518.93■□□□□ 0.623e-13■■■■□ 21.8
U2AF2P26368 ACADVL-214ENST00000578711 1732 nt18.91■□□□□ 0.623e-13■■■■□ 21.8
U2AF2P26368 ACADVL-239ENST00000585203 947 ntTSL 516.82■□□□□ 0.283e-13■■■■□ 21.8
U2AF2P26368 ACADVL-219ENST00000579425 1234 ntTSL 516.82■□□□□ 0.283e-13■■■■□ 21.8
U2AF2P26368 ACADVL-216ENST00000578824 720 ntTSL 211.7□□□□□ -0.543e-13■■■■□ 21.8
U2AF2P26368 ACADVL-213ENST00000578579 458 ntTSL 35.99□□□□□ -1.453e-13■■■■□ 21.8
U2AF2P26368 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC16.06■□□□□ 0.166e-7■■■■□ 21.8
U2AF2P26368 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.446e-7■■■■□ 21.8
U2AF2P26368 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC11.87□□□□□ -0.516e-7■■■■□ 21.8
U2AF2P26368 CDC27-216ENST00000574304 514 ntTSL 52.01□□□□□ -2.091e-6■■■■□ 21.8
U2AF2P26368 LINC00969-281ENST00000626969 745 ntTSL 511.48□□□□□ -0.571e-11■■■■□ 21.8
U2AF2P26368 GFM2-203ENST00000427854 1870 ntTSL 2 BASIC12.99□□□□□ -0.334e-7■■■■□ 21.8
U2AF2P26368 GFM2-201ENST00000296805 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.424e-7■■■■□ 21.8
U2AF2P26368 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC10.59□□□□□ -0.714e-7■■■■□ 21.8
U2AF2P26368 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.794e-7■■■■□ 21.8
U2AF2P26368 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.021e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.99□□□□□ -1.611e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-207ENST00000449777 2207 ntTSL 24.7□□□□□ -1.661e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-208ENST00000454324 2359 ntTSL 24.33□□□□□ -1.721e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4□□□□□ -1.771e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.91□□□□□ -1.781e-6■■■■□ 21.8
U2AF2P26368 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.951e-6■■■■□ 21.8
U2AF2P26368 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC14.23□□□□□ -0.134e-6■■■■□ 21.8
U2AF2P26368 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.614e-6■■■■□ 21.8
U2AF2P26368 EIF2D-210ENST00000617960 5224 ntTSL 1 (best)9.08□□□□□ -0.964e-6■■■■□ 21.8
U2AF2P26368 EIF2D-209ENST00000613435 437 ntTSL 35.72□□□□□ -1.494e-6■■■■□ 21.8
U2AF2P26368 EIF2D-208ENST00000484492 479 ntTSL 51.99□□□□□ -2.094e-6■■■■□ 21.8
U2AF2P26368 TCP1-218ENST00000546204 566 ntTSL 210.37□□□□□ -0.754e-48■■■■□ 21.8
U2AF2P26368 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.223e-6■■■■□ 21.8
U2AF2P26368 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.456e-12■■■■□ 21.8
U2AF2P26368 INTS6-205ENST00000461515 602 ntTSL 228.15■■■□□ 2.13e-13■■■■□ 21.8
U2AF2P26368 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 22e-6■■■■□ 21.8
U2AF2P26368 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.11■■□□□ 1.932e-6■■■■□ 21.8
U2AF2P26368 ZNF444-202ENST00000586123 574 ntTSL 426.47■■□□□ 1.833e-13■■■■□ 21.8
U2AF2P26368 PREB-206ENST00000444452 2030 ntTSL 1 (best)25.92■■□□□ 1.742e-6■■■■□ 21.8
U2AF2P26368 ZNF444-208ENST00000588358 642 ntTSL 225.04■■□□□ 1.63e-13■■■■□ 21.8
U2AF2P26368 ZNF444-205ENST00000587467 646 ntTSL 224.33■■□□□ 1.493e-13■■■■□ 21.8
U2AF2P26368 ZNF444-212ENST00000593100 562 ntTSL 223.28■■□□□ 1.323e-13■■■■□ 21.8
U2AF2P26368 ZNF444-209ENST00000591564 586 ntTSL 222.94■■□□□ 1.263e-13■■■■□ 21.8
U2AF2P26368 ZNF444-207ENST00000588203 585 ntTSL 422.49■■□□□ 1.193e-13■■■■□ 21.8
U2AF2P26368 INTS6-217ENST00000491723 713 ntTSL 521.66■■□□□ 1.063e-13■■■■□ 21.8
U2AF2P26368 PREB-208ENST00000468045 3057 ntTSL 221.56■■□□□ 1.042e-6■■■■□ 21.8
U2AF2P26368 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.411e-6■■■■□ 21.8
U2AF2P26368 PREB-207ENST00000456259 1105 ntTSL 212.96□□□□□ -0.332e-6■■■■□ 21.8
U2AF2P26368 AC068946.1-201ENST00000498327 4222 ntTSL 210.5□□□□□ -0.731e-6■■■■□ 21.8
U2AF2P26368 PREB-204ENST00000430533 615 ntTSL 210.39□□□□□ -0.752e-6■■■■□ 21.8
U2AF2P26368 PREB-205ENST00000441451 351 ntTSL 59.88□□□□□ -0.832e-6■■■■□ 21.8
U2AF2P26368 CHD9-201ENST00000219084 8739 ntTSL 1 (best)4.85□□□□□ -1.632e-6■■■■□ 21.8
U2AF2P26368 ALG8-211ENST00000527099 829 ntTSL 415.82■□□□□ 0.127e-14■■■■□ 21.8
U2AF2P26368 ALG8-210ENST00000526928 614 ntTSL 414.4□□□□□ -0.17e-14■■■■□ 21.8
U2AF2P26368 ALG8-217ENST00000532050 892 ntTSL 1 (best)12.5□□□□□ -0.417e-14■■■■□ 21.8
U2AF2P26368 ALG8-213ENST00000530454 881 ntTSL 512.5□□□□□ -0.417e-14■■■■□ 21.8
U2AF2P26368 ALG8-215ENST00000530910 860 ntTSL 511.99□□□□□ -0.497e-14■■■■□ 21.8
U2AF2P26368 ALG8-204ENST00000525755 838 ntTSL 311.85□□□□□ -0.517e-14■■■■□ 21.8
U2AF2P26368 ALG8-205ENST00000525761 468 ntTSL 38.06□□□□□ -1.127e-14■■■■□ 21.8
U2AF2P26368 ALG8-207ENST00000525870 778 ntTSL 56.87□□□□□ -1.317e-14■■■■□ 21.8
U2AF2P26368 TMEM131-203ENST00000418629 1105 ntTSL 217.09■□□□□ 0.332e-6■■■■□ 21.8
U2AF2P26368 DCAF6-208ENST00000470721 2803 ntTSL 219.96■□□□□ 0.792e-6■■■■□ 21.8
U2AF2P26368 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.19□□□□□ -1.13e-6■■■■□ 21.7
U2AF2P26368 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.14□□□□□ -1.113e-6■■■■□ 21.7
U2AF2P26368 ZMYND11-206ENST00000397955 659 ntTSL 57.2□□□□□ -1.263e-6■■■■□ 21.7
U2AF2P26368 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.07□□□□□ -1.283e-6■■■■□ 21.7
U2AF2P26368 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.262e-6■■■■□ 21.7
U2AF2P26368 HMBOX1-215ENST00000560599 1426 ntTSL 522.13■■□□□ 1.133e-6■■■■□ 21.7
U2AF2P26368 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.55■□□□□ 0.723e-6■■■■□ 21.7
U2AF2P26368 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.34■□□□□ 0.373e-6■■■■□ 21.7
Retrieved 100 of 36,523 protein–RNA pairs in 395 ms