RNA–Protein interactions for RNA: ENST00000427854.6

GFM2-203, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 2 BASIC

Gene GFM2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-203ENST00000427854 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
GFM2-203ENST00000427854 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
GFM2-203ENST00000427854 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
GFM2-203ENST00000427854 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
GFM2-203ENST00000427854 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
GFM2-203ENST00000427854 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
GFM2-203ENST00000427854 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
GFM2-203ENST00000427854 ABCC9O60706 1549 aa20.03■□□□□ 0.8
GFM2-203ENST00000427854 NACADO15069 1562 aa19.88■□□□□ 0.77
GFM2-203ENST00000427854 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
GFM2-203ENST00000427854 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
GFM2-203ENST00000427854 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
GFM2-203ENST00000427854 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
GFM2-203ENST00000427854 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
GFM2-203ENST00000427854 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
GFM2-203ENST00000427854 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
GFM2-203ENST00000427854 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.64
GFM2-203ENST00000427854 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
GFM2-203ENST00000427854 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
GFM2-203ENST00000427854 WIZO95785 1651 aa18.99■□□□□ 0.63
GFM2-203ENST00000427854 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
GFM2-203ENST00000427854 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
GFM2-203ENST00000427854 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
GFM2-203ENST00000427854 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
GFM2-203ENST00000427854 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
GFM2-203ENST00000427854 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
GFM2-203ENST00000427854 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
GFM2-203ENST00000427854 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
GFM2-203ENST00000427854 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
GFM2-203ENST00000427854 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
GFM2-203ENST00000427854 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
GFM2-203ENST00000427854 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
GFM2-203ENST00000427854 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
GFM2-203ENST00000427854 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
GFM2-203ENST00000427854 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
GFM2-203ENST00000427854 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
GFM2-203ENST00000427854 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
GFM2-203ENST00000427854 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
GFM2-203ENST00000427854 EEA1Q15075 1411 aa18.06■□□□□ 0.48
GFM2-203ENST00000427854 SOGA1O94964 1423 aa18.03■□□□□ 0.48
GFM2-203ENST00000427854 CFTRP13569 1480 aa18.02■□□□□ 0.48
GFM2-203ENST00000427854 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
GFM2-203ENST00000427854 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
GFM2-203ENST00000427854 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
GFM2-203ENST00000427854 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
GFM2-203ENST00000427854 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
GFM2-203ENST00000427854 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
GFM2-203ENST00000427854 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
GFM2-203ENST00000427854 CUX1P39880 1505 aa17.86■□□□□ 0.45
GFM2-203ENST00000427854 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
GFM2-203ENST00000427854 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
GFM2-203ENST00000427854 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
GFM2-203ENST00000427854 KIF21BO75037 1637 aa17.81■□□□□ 0.44
GFM2-203ENST00000427854 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
GFM2-203ENST00000427854 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
GFM2-203ENST00000427854 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
GFM2-203ENST00000427854 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
GFM2-203ENST00000427854 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
GFM2-203ENST00000427854 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
GFM2-203ENST00000427854 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
GFM2-203ENST00000427854 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
GFM2-203ENST00000427854 NESP48681 1621 aa17.67■□□□□ 0.42
GFM2-203ENST00000427854 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
GFM2-203ENST00000427854 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
GFM2-203ENST00000427854 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
GFM2-203ENST00000427854 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
GFM2-203ENST00000427854 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
GFM2-203ENST00000427854 CUX2O14529 1486 aa17.58■□□□□ 0.4
GFM2-203ENST00000427854 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
GFM2-203ENST00000427854 CLIP1P30622 1438 aa17.55■□□□□ 0.4
GFM2-203ENST00000427854 HRCP23327 699 aa17.54■□□□□ 0.4
GFM2-203ENST00000427854 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
GFM2-203ENST00000427854 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
GFM2-203ENST00000427854 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
GFM2-203ENST00000427854 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
GFM2-203ENST00000427854 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
GFM2-203ENST00000427854 IGF1RP08069 1367 aa17.47■□□□□ 0.39
GFM2-203ENST00000427854 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
GFM2-203ENST00000427854 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
GFM2-203ENST00000427854 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
GFM2-203ENST00000427854 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
GFM2-203ENST00000427854 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
GFM2-203ENST00000427854 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
GFM2-203ENST00000427854 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
GFM2-203ENST00000427854 CUL7Q14999 1698 aa17.34■□□□□ 0.37
GFM2-203ENST00000427854 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
GFM2-203ENST00000427854 ABCA5Q8WWZ7 1642 aa17.31■□□□□ 0.36
GFM2-203ENST00000427854 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
GFM2-203ENST00000427854 APLP2Q06481 763 aa17.29■□□□□ 0.36
GFM2-203ENST00000427854 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
GFM2-203ENST00000427854 TARBP1Q13395 1621 aaKnown RBP17.26■□□□□ 0.35
GFM2-203ENST00000427854 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
GFM2-203ENST00000427854 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
GFM2-203ENST00000427854 WDR62O43379 1518 aa17.2■□□□□ 0.34
GFM2-203ENST00000427854 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
GFM2-203ENST00000427854 CTTNBP2Q8WZ74 1663 aa17.19■□□□□ 0.34
GFM2-203ENST00000427854 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
GFM2-203ENST00000427854 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
GFM2-203ENST00000427854 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
GFM2-203ENST00000427854 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms