RNA–Protein interactions for RNA: ENST00000546204.1

TCP1-218, Transcript of t-complex 1, humanhuman

TSL 2

Gene TCP1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCP1-218ENST00000546204 AEBP2Q6ZN18 517 aaPredicted RBP32.63■■■□□ 2.81
TCP1-218ENST00000546204 CHIC1Q5VXU3 224 aa31.29■■■□□ 2.6
TCP1-218ENST00000546204 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
TCP1-218ENST00000546204 PHF23Q9BUL5 403 aaPredicted RBP27.48■■□□□ 1.99
TCP1-218ENST00000546204 FOXD1Q16676 465 aa25.85■■□□□ 1.73
TCP1-218ENST00000546204 PLPPR3Q6T4P5 718 aa25.15■■□□□ 1.62
TCP1-218ENST00000546204 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
TCP1-218ENST00000546204 ADRA2BP18089 450 aa24.41■■□□□ 1.5
TCP1-218ENST00000546204 PIAS4Q8N2W9 510 aaPredicted RBP24.23■■□□□ 1.47
TCP1-218ENST00000546204 MSH5O43196 834 aa24.03■■□□□ 1.44
TCP1-218ENST00000546204 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
TCP1-218ENST00000546204 MAPK8IP2Q13387 824 aaPredicted RBP22.33■■□□□ 1.17
TCP1-218ENST00000546204 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
TCP1-218ENST00000546204 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
TCP1-218ENST00000546204 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
TCP1-218ENST00000546204 CNKSR2Q8WXI2 1034 aa21.6■■□□□ 1.05
TCP1-218ENST00000546204 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
TCP1-218ENST00000546204 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
TCP1-218ENST00000546204 RNF216Q9NWF9 866 aaPredicted RBP21.31■■□□□ 1
TCP1-218ENST00000546204 DCAF8L1A6NGE4 600 aa21.19■□□□□ 0.98
TCP1-218ENST00000546204 NPM3O75607 178 aaKnown RBP21.05■□□□□ 0.96
TCP1-218ENST00000546204 KCNA4P22459 653 aa20.96■□□□□ 0.95
TCP1-218ENST00000546204 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
TCP1-218ENST00000546204 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
TCP1-218ENST00000546204 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
TCP1-218ENST00000546204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■□□□ 12
TCP1-218ENST00000546204 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
TCP1-218ENST00000546204 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
TCP1-218ENST00000546204 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
TCP1-218ENST00000546204 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
TCP1-218ENST00000546204 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
TCP1-218ENST00000546204 CAPN15O75808 1086 aa19.58■□□□□ 0.72
TCP1-218ENST00000546204 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
TCP1-218ENST00000546204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
TCP1-218ENST00000546204 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
TCP1-218ENST00000546204 APLP2Q06481 763 aa19.44■□□□□ 0.7
TCP1-218ENST00000546204 MYCNP04198 464 aaPredicted RBP19.43■□□□□ 0.7
TCP1-218ENST00000546204 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
TCP1-218ENST00000546204 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
TCP1-218ENST00000546204 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
TCP1-218ENST00000546204 DSG3P32926 999 aa19.36■□□□□ 0.69
TCP1-218ENST00000546204 ZBTB22O15209 634 aa19.27■□□□□ 0.68
TCP1-218ENST00000546204 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
TCP1-218ENST00000546204 ABCB7O75027 752 aa19.16■□□□□ 0.66
TCP1-218ENST00000546204 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
TCP1-218ENST00000546204 POLA2Q14181 598 aa18.92■□□□□ 0.62
TCP1-218ENST00000546204 ATXN8OSP0DMR3 200 aa18.78■□□□□ 0.6
TCP1-218ENST00000546204 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
TCP1-218ENST00000546204 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
TCP1-218ENST00000546204 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
TCP1-218ENST00000546204 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
TCP1-218ENST00000546204 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
TCP1-218ENST00000546204 FBLN2P98095 1184 aa18.22■□□□□ 0.51
TCP1-218ENST00000546204 MKRN4PQ13434 485 aaPredicted RBP18.14■□□□□ 0.49
TCP1-218ENST00000546204 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
TCP1-218ENST00000546204 POTEHQ6S545 545 aa18.02■□□□□ 0.48
TCP1-218ENST00000546204 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
TCP1-218ENST00000546204 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
TCP1-218ENST00000546204 SPDYE2Q495Y8 402 aa17.97■□□□□ 0.47
TCP1-218ENST00000546204 REM2Q8IYK8 340 aaPredicted RBP17.96■□□□□ 0.47
TCP1-218ENST00000546204 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
TCP1-218ENST00000546204 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
TCP1-218ENST00000546204 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
TCP1-218ENST00000546204 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
TCP1-218ENST00000546204 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
TCP1-218ENST00000546204 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
TCP1-218ENST00000546204 SPDYE1Q8NFV5 336 aaPredicted RBP17.58■□□□□ 0.4
TCP1-218ENST00000546204 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
TCP1-218ENST00000546204 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■■■□□ 15.4
TCP1-218ENST00000546204 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
TCP1-218ENST00000546204 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
TCP1-218ENST00000546204 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
TCP1-218ENST00000546204 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
TCP1-218ENST00000546204 HAX1O00165 279 aa17.2■□□□□ 0.34
TCP1-218ENST00000546204 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
TCP1-218ENST00000546204 PROM2Q8N271 834 aa17.05■□□□□ 0.32
TCP1-218ENST00000546204 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
TCP1-218ENST00000546204 EVX2Q03828 476 aa17.03■□□□□ 0.32
TCP1-218ENST00000546204 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
TCP1-218ENST00000546204 FARP1Q9Y4F1 1045 aaPredicted RBP16.97■□□□□ 0.31
TCP1-218ENST00000546204 CREBZFQ9NS37 354 aa16.96■□□□□ 0.31
TCP1-218ENST00000546204 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
TCP1-218ENST00000546204 FKBP8Q14318 412 aa16.94■□□□□ 0.3
TCP1-218ENST00000546204 CD44P16070 742 aaKnown RBP16.77■□□□□ 0.28
TCP1-218ENST00000546204 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
TCP1-218ENST00000546204 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
TCP1-218ENST00000546204 MIER1Q8N108 512 aa16.65■□□□□ 0.26
TCP1-218ENST00000546204 GABBR2O75899 941 aa16.64■□□□□ 0.25
TCP1-218ENST00000546204 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
TCP1-218ENST00000546204 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
TCP1-218ENST00000546204 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
TCP1-218ENST00000546204 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
TCP1-218ENST00000546204 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
TCP1-218ENST00000546204 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
TCP1-218ENST00000546204 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
TCP1-218ENST00000546204 CLCN6P51797 869 aa16.44■□□□□ 0.22
TCP1-218ENST00000546204 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
TCP1-218ENST00000546204 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
TCP1-218ENST00000546204 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
TCP1-218ENST00000546204 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms