RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
CDC27-216ENST00000574304 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
CDC27-216ENST00000574304 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
CDC27-216ENST00000574304 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
CDC27-216ENST00000574304 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
CDC27-216ENST00000574304 FOXD1Q16676 465 aa21.48■■□□□ 1.03
CDC27-216ENST00000574304 ADRA2BP18089 450 aa20.61■□□□□ 0.89
CDC27-216ENST00000574304 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
CDC27-216ENST00000574304 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
CDC27-216ENST00000574304 MSH5O43196 834 aa19.83■□□□□ 0.77
CDC27-216ENST00000574304 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
CDC27-216ENST00000574304 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
CDC27-216ENST00000574304 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
CDC27-216ENST00000574304 KCNA4P22459 653 aa18.47■□□□□ 0.55
CDC27-216ENST00000574304 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
CDC27-216ENST00000574304 CNKSR2Q8WXI2 1034 aa18.46■□□□□ 0.55
CDC27-216ENST00000574304 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
CDC27-216ENST00000574304 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
CDC27-216ENST00000574304 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
CDC27-216ENST00000574304 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
CDC27-216ENST00000574304 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
CDC27-216ENST00000574304 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
CDC27-216ENST00000574304 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
CDC27-216ENST00000574304 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
CDC27-216ENST00000574304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■□□□ 14.1
CDC27-216ENST00000574304 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
CDC27-216ENST00000574304 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
CDC27-216ENST00000574304 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
CDC27-216ENST00000574304 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
CDC27-216ENST00000574304 ZBTB22O15209 634 aa16.98■□□□□ 0.31
CDC27-216ENST00000574304 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
CDC27-216ENST00000574304 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
CDC27-216ENST00000574304 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
CDC27-216ENST00000574304 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
CDC27-216ENST00000574304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
CDC27-216ENST00000574304 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
CDC27-216ENST00000574304 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
CDC27-216ENST00000574304 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
CDC27-216ENST00000574304 APLP2Q06481 763 aa16.54■□□□□ 0.24
CDC27-216ENST00000574304 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
CDC27-216ENST00000574304 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
CDC27-216ENST00000574304 CAPN15O75808 1086 aa16.42■□□□□ 0.22
CDC27-216ENST00000574304 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
CDC27-216ENST00000574304 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
CDC27-216ENST00000574304 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
CDC27-216ENST00000574304 DSG3P32926 999 aa16.14■□□□□ 0.17
CDC27-216ENST00000574304 ABCB7O75027 752 aa16.1■□□□□ 0.17
CDC27-216ENST00000574304 POLA2Q14181 598 aa16.04■□□□□ 0.16
CDC27-216ENST00000574304 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
CDC27-216ENST00000574304 FBLN2P98095 1184 aa15.69■□□□□ 0.1
CDC27-216ENST00000574304 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
CDC27-216ENST00000574304 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
CDC27-216ENST00000574304 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
CDC27-216ENST00000574304 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
CDC27-216ENST00000574304 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
CDC27-216ENST00000574304 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
CDC27-216ENST00000574304 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
CDC27-216ENST00000574304 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
CDC27-216ENST00000574304 FKBP8Q14318 412 aa15.24■□□□□ 0.03
CDC27-216ENST00000574304 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
CDC27-216ENST00000574304 AKT1S1Q96B36 256 aa15.19■□□□□ 0.02
CDC27-216ENST00000574304 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
CDC27-216ENST00000574304 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
CDC27-216ENST00000574304 PROM2Q8N271 834 aa15□□□□□ -0.01
CDC27-216ENST00000574304 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
CDC27-216ENST00000574304 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
CDC27-216ENST00000574304 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
CDC27-216ENST00000574304 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
CDC27-216ENST00000574304 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
CDC27-216ENST00000574304 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
CDC27-216ENST00000574304 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CDC27-216ENST00000574304 FXR2P51116 673 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDC27-216ENST00000574304 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
CDC27-216ENST00000574304 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
CDC27-216ENST00000574304 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
CDC27-216ENST00000574304 MIER1Q8N108 512 aa14.5□□□□□ -0.09
CDC27-216ENST00000574304 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
CDC27-216ENST00000574304 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
CDC27-216ENST00000574304 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
CDC27-216ENST00000574304 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
CDC27-216ENST00000574304 POTEHQ6S545 545 aa14.37□□□□□ -0.11
CDC27-216ENST00000574304 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
CDC27-216ENST00000574304 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
CDC27-216ENST00000574304 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
CDC27-216ENST00000574304 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
CDC27-216ENST00000574304 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
CDC27-216ENST00000574304 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDC27-216ENST00000574304 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
CDC27-216ENST00000574304 HAX1O00165 279 aa14.13□□□□□ -0.15
CDC27-216ENST00000574304 NUBP1P53384 320 aa14.13□□□□□ -0.15
CDC27-216ENST00000574304 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
CDC27-216ENST00000574304 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
CDC27-216ENST00000574304 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
CDC27-216ENST00000574304 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
CDC27-216ENST00000574304 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
CDC27-216ENST00000574304 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
CDC27-216ENST00000574304 EVX2Q03828 476 aa13.99□□□□□ -0.17
CDC27-216ENST00000574304 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
CDC27-216ENST00000574304 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
CDC27-216ENST00000574304 GSE1Q14687 1217 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms