RNA–Protein interactions for RNA: ENST00000558098.4

ZMYND11-215, Transcript of zinc finger MYND-type containing 11, humanhuman

TSL 1 (best) BASIC

Gene ZMYND11, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZMYND11-215ENST00000558098 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
ZMYND11-215ENST00000558098 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
ZMYND11-215ENST00000558098 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
ZMYND11-215ENST00000558098 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
ZMYND11-215ENST00000558098 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
ZMYND11-215ENST00000558098 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
ZMYND11-215ENST00000558098 ABCC9O60706 1549 aa14.65□□□□□ -0.06
ZMYND11-215ENST00000558098 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
ZMYND11-215ENST00000558098 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
ZMYND11-215ENST00000558098 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
ZMYND11-215ENST00000558098 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.12
ZMYND11-215ENST00000558098 NACADO15069 1562 aa14.29□□□□□ -0.12
ZMYND11-215ENST00000558098 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
ZMYND11-215ENST00000558098 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
ZMYND11-215ENST00000558098 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
ZMYND11-215ENST00000558098 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
ZMYND11-215ENST00000558098 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
ZMYND11-215ENST00000558098 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
ZMYND11-215ENST00000558098 ADRA2BP18089 450 aa13.84□□□□□ -0.19
ZMYND11-215ENST00000558098 KCNA4P22459 653 aa13.81□□□□□ -0.2
ZMYND11-215ENST00000558098 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
ZMYND11-215ENST00000558098 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZMYND11-215ENST00000558098 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
ZMYND11-215ENST00000558098 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
ZMYND11-215ENST00000558098 CECR2Q9BXF3 1484 aa13.4□□□□□ -0.26
ZMYND11-215ENST00000558098 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
ZMYND11-215ENST00000558098 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
ZMYND11-215ENST00000558098 BAZ1AQ9NRL2 1556 aaPredicted RBP13.35□□□□□ -0.27
ZMYND11-215ENST00000558098 FOXD1Q16676 465 aa13.33□□□□□ -0.27
ZMYND11-215ENST00000558098 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
ZMYND11-215ENST00000558098 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
ZMYND11-215ENST00000558098 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
ZMYND11-215ENST00000558098 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
ZMYND11-215ENST00000558098 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
ZMYND11-215ENST00000558098 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
ZMYND11-215ENST00000558098 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.29
ZMYND11-215ENST00000558098 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
ZMYND11-215ENST00000558098 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
ZMYND11-215ENST00000558098 WIZO95785 1651 aa13.18□□□□□ -0.3
ZMYND11-215ENST00000558098 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
ZMYND11-215ENST00000558098 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
ZMYND11-215ENST00000558098 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
ZMYND11-215ENST00000558098 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
ZMYND11-215ENST00000558098 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
ZMYND11-215ENST00000558098 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
ZMYND11-215ENST00000558098 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
ZMYND11-215ENST00000558098 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
ZMYND11-215ENST00000558098 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
ZMYND11-215ENST00000558098 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
ZMYND11-215ENST00000558098 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
ZMYND11-215ENST00000558098 CFTRP13569 1480 aa12.78□□□□□ -0.36
ZMYND11-215ENST00000558098 NESP48681 1621 aa12.78□□□□□ -0.36
ZMYND11-215ENST00000558098 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
ZMYND11-215ENST00000558098 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
ZMYND11-215ENST00000558098 ZBTB22O15209 634 aa12.74□□□□□ -0.37
ZMYND11-215ENST00000558098 KIF21AQ7Z4S6 1674 aa12.69□□□□□ -0.38
ZMYND11-215ENST00000558098 PDS5BQ9NTI5 1447 aa12.65□□□□□ -0.38
ZMYND11-215ENST00000558098 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
ZMYND11-215ENST00000558098 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
ZMYND11-215ENST00000558098 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
ZMYND11-215ENST00000558098 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
ZMYND11-215ENST00000558098 WDR62O43379 1518 aa12.54□□□□□ -0.4
ZMYND11-215ENST00000558098 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
ZMYND11-215ENST00000558098 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.41
ZMYND11-215ENST00000558098 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
ZMYND11-215ENST00000558098 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
ZMYND11-215ENST00000558098 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
ZMYND11-215ENST00000558098 CUX1P39880 1505 aa12.47□□□□□ -0.41
ZMYND11-215ENST00000558098 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
ZMYND11-215ENST00000558098 ABCC8Q09428 1581 aa12.46□□□□□ -0.41
ZMYND11-215ENST00000558098 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
ZMYND11-215ENST00000558098 CUX2O14529 1486 aa12.44□□□□□ -0.42
ZMYND11-215ENST00000558098 SYNJ1O43426 1573 aa12.44□□□□□ -0.42
ZMYND11-215ENST00000558098 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
ZMYND11-215ENST00000558098 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
ZMYND11-215ENST00000558098 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
ZMYND11-215ENST00000558098 POLA1P09884 1462 aaPredicted RBP12.38□□□□□ -0.43
ZMYND11-215ENST00000558098 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
ZMYND11-215ENST00000558098 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
ZMYND11-215ENST00000558098 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
ZMYND11-215ENST00000558098 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
ZMYND11-215ENST00000558098 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
ZMYND11-215ENST00000558098 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
ZMYND11-215ENST00000558098 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
ZMYND11-215ENST00000558098 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
ZMYND11-215ENST00000558098 SOGA1O94964 1423 aa12.28□□□□□ -0.44
ZMYND11-215ENST00000558098 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
ZMYND11-215ENST00000558098 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
ZMYND11-215ENST00000558098 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
ZMYND11-215ENST00000558098 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
ZMYND11-215ENST00000558098 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.464e-6■■■■■ 31
ZMYND11-215ENST00000558098 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
ZMYND11-215ENST00000558098 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
ZMYND11-215ENST00000558098 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
ZMYND11-215ENST00000558098 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
ZMYND11-215ENST00000558098 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
ZMYND11-215ENST00000558098 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
ZMYND11-215ENST00000558098 RUSC2Q8N2Y8 1516 aa12.12□□□□□ -0.47
ZMYND11-215ENST00000558098 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
ZMYND11-215ENST00000558098 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms