RNA–Protein interactions for RNA: ENST00000619245.1

ACACA-244, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 3

Gene ACACA, Length 635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-244ENST00000619245 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
ACACA-244ENST00000619245 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
ACACA-244ENST00000619245 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
ACACA-244ENST00000619245 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
ACACA-244ENST00000619245 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
ACACA-244ENST00000619245 FOXD1Q16676 465 aa16.32■□□□□ 0.2
ACACA-244ENST00000619245 MSH5O43196 834 aa15.58■□□□□ 0.08
ACACA-244ENST00000619245 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
ACACA-244ENST00000619245 NISCHQ9Y2I1 1504 aa15.02□□□□□ -0.01
ACACA-244ENST00000619245 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
ACACA-244ENST00000619245 ADRA2BP18089 450 aa14.61□□□□□ -0.07
ACACA-244ENST00000619245 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
ACACA-244ENST00000619245 ABCC9O60706 1549 aa14.13□□□□□ -0.15
ACACA-244ENST00000619245 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
ACACA-244ENST00000619245 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
ACACA-244ENST00000619245 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
ACACA-244ENST00000619245 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
ACACA-244ENST00000619245 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
ACACA-244ENST00000619245 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
ACACA-244ENST00000619245 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
ACACA-244ENST00000619245 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
ACACA-244ENST00000619245 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
ACACA-244ENST00000619245 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
ACACA-244ENST00000619245 NACADO15069 1562 aa13□□□□□ -0.33
ACACA-244ENST00000619245 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
ACACA-244ENST00000619245 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
ACACA-244ENST00000619245 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
ACACA-244ENST00000619245 UNC13AQ9UPW8 1703 aa12.92□□□□□ -0.34
ACACA-244ENST00000619245 BICRAQ9NZM4 1560 aa12.84□□□□□ -0.35
ACACA-244ENST00000619245 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
ACACA-244ENST00000619245 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
ACACA-244ENST00000619245 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.37
ACACA-244ENST00000619245 POTEHQ6S545 545 aa12.69□□□□□ -0.38
ACACA-244ENST00000619245 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
ACACA-244ENST00000619245 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
ACACA-244ENST00000619245 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
ACACA-244ENST00000619245 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
ACACA-244ENST00000619245 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
ACACA-244ENST00000619245 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
ACACA-244ENST00000619245 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
ACACA-244ENST00000619245 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
ACACA-244ENST00000619245 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
ACACA-244ENST00000619245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■■■□□ 18.5
ACACA-244ENST00000619245 CUX2O14529 1486 aa12.3□□□□□ -0.44
ACACA-244ENST00000619245 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
ACACA-244ENST00000619245 DSG3P32926 999 aa12.13□□□□□ -0.47
ACACA-244ENST00000619245 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
ACACA-244ENST00000619245 CAPN15O75808 1086 aa12.04□□□□□ -0.48
ACACA-244ENST00000619245 SPINK5Q9NQ38 1064 aaPredicted RBP12.01□□□□□ -0.49
ACACA-244ENST00000619245 NESP48681 1621 aa12□□□□□ -0.49
ACACA-244ENST00000619245 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
ACACA-244ENST00000619245 NCAPD3P42695 1498 aa11.99□□□□□ -0.49
ACACA-244ENST00000619245 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
ACACA-244ENST00000619245 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
ACACA-244ENST00000619245 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
ACACA-244ENST00000619245 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
ACACA-244ENST00000619245 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
ACACA-244ENST00000619245 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
ACACA-244ENST00000619245 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
ACACA-244ENST00000619245 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
ACACA-244ENST00000619245 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
ACACA-244ENST00000619245 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
ACACA-244ENST00000619245 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
ACACA-244ENST00000619245 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
ACACA-244ENST00000619245 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
ACACA-244ENST00000619245 ABCB7O75027 752 aa11.69□□□□□ -0.54
ACACA-244ENST00000619245 WDR62O43379 1518 aa11.69□□□□□ -0.54
ACACA-244ENST00000619245 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
ACACA-244ENST00000619245 TRHP20396 242 aaPredicted RBP11.67□□□□□ -0.54
ACACA-244ENST00000619245 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
ACACA-244ENST00000619245 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
ACACA-244ENST00000619245 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
ACACA-244ENST00000619245 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
ACACA-244ENST00000619245 APLP2Q06481 763 aa11.62□□□□□ -0.55
ACACA-244ENST00000619245 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
ACACA-244ENST00000619245 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
ACACA-244ENST00000619245 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
ACACA-244ENST00000619245 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
ACACA-244ENST00000619245 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
ACACA-244ENST00000619245 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
ACACA-244ENST00000619245 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
ACACA-244ENST00000619245 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
ACACA-244ENST00000619245 ARHGEF11O15085 1522 aa11.51□□□□□ -0.57
ACACA-244ENST00000619245 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
ACACA-244ENST00000619245 CYB5RLQ6IPT4 315 aa11.45□□□□□ -0.58
ACACA-244ENST00000619245 WIZO95785 1651 aa11.44□□□□□ -0.58
ACACA-244ENST00000619245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
ACACA-244ENST00000619245 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
ACACA-244ENST00000619245 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
ACACA-244ENST00000619245 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
ACACA-244ENST00000619245 CFTRP13569 1480 aa11.4□□□□□ -0.58
ACACA-244ENST00000619245 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
ACACA-244ENST00000619245 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
ACACA-244ENST00000619245 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
ACACA-244ENST00000619245 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
ACACA-244ENST00000619245 CHD1O14646 1710 aa11.32□□□□□ -0.6
ACACA-244ENST00000619245 FBLN2P98095 1184 aa11.28□□□□□ -0.6
ACACA-244ENST00000619245 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
ACACA-244ENST00000619245 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
ACACA-244ENST00000619245 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms