RNA–Protein interactions for RNA: ENST00000345239.6

GFM2-202, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 1 (best) BASIC

Gene GFM2, Length 2,856 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-202ENST00000345239 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
GFM2-202ENST00000345239 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
GFM2-202ENST00000345239 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
GFM2-202ENST00000345239 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
GFM2-202ENST00000345239 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
GFM2-202ENST00000345239 ABCC9O60706 1549 aa17.82■□□□□ 0.44
GFM2-202ENST00000345239 NACADO15069 1562 aa17.76■□□□□ 0.43
GFM2-202ENST00000345239 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
GFM2-202ENST00000345239 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
GFM2-202ENST00000345239 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
GFM2-202ENST00000345239 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
GFM2-202ENST00000345239 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
GFM2-202ENST00000345239 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
GFM2-202ENST00000345239 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
GFM2-202ENST00000345239 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
GFM2-202ENST00000345239 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
GFM2-202ENST00000345239 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
GFM2-202ENST00000345239 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
GFM2-202ENST00000345239 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
GFM2-202ENST00000345239 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.25
GFM2-202ENST00000345239 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
GFM2-202ENST00000345239 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
GFM2-202ENST00000345239 WIZO95785 1651 aa16.45■□□□□ 0.22
GFM2-202ENST00000345239 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
GFM2-202ENST00000345239 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
GFM2-202ENST00000345239 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
GFM2-202ENST00000345239 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
GFM2-202ENST00000345239 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
GFM2-202ENST00000345239 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
GFM2-202ENST00000345239 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
GFM2-202ENST00000345239 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
GFM2-202ENST00000345239 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
GFM2-202ENST00000345239 CFTRP13569 1480 aa15.89■□□□□ 0.13
GFM2-202ENST00000345239 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
GFM2-202ENST00000345239 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
GFM2-202ENST00000345239 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
GFM2-202ENST00000345239 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
GFM2-202ENST00000345239 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
GFM2-202ENST00000345239 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
GFM2-202ENST00000345239 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
GFM2-202ENST00000345239 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
GFM2-202ENST00000345239 NESP48681 1621 aa15.61■□□□□ 0.09
GFM2-202ENST00000345239 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
GFM2-202ENST00000345239 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
GFM2-202ENST00000345239 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
GFM2-202ENST00000345239 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
GFM2-202ENST00000345239 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
GFM2-202ENST00000345239 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
GFM2-202ENST00000345239 CUX1P39880 1505 aa15.56■□□□□ 0.08
GFM2-202ENST00000345239 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
GFM2-202ENST00000345239 WDR62O43379 1518 aa15.48■□□□□ 0.07
GFM2-202ENST00000345239 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
GFM2-202ENST00000345239 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
GFM2-202ENST00000345239 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
GFM2-202ENST00000345239 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
GFM2-202ENST00000345239 EEA1Q15075 1411 aa15.41■□□□□ 0.06
GFM2-202ENST00000345239 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
GFM2-202ENST00000345239 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
GFM2-202ENST00000345239 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
GFM2-202ENST00000345239 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
GFM2-202ENST00000345239 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
GFM2-202ENST00000345239 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
GFM2-202ENST00000345239 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
GFM2-202ENST00000345239 KIF21BO75037 1637 aa15.26■□□□□ 0.03
GFM2-202ENST00000345239 CUX2O14529 1486 aa15.26■□□□□ 0.03
GFM2-202ENST00000345239 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
GFM2-202ENST00000345239 SOGA1O94964 1423 aa15.24■□□□□ 0.03
GFM2-202ENST00000345239 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
GFM2-202ENST00000345239 CUL7Q14999 1698 aa15.2■□□□□ 0.02
GFM2-202ENST00000345239 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
GFM2-202ENST00000345239 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
GFM2-202ENST00000345239 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
GFM2-202ENST00000345239 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
GFM2-202ENST00000345239 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
GFM2-202ENST00000345239 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
GFM2-202ENST00000345239 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
GFM2-202ENST00000345239 GOLGA3Q08378 1498 aa15.1■□□□□ 0.01
GFM2-202ENST00000345239 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
GFM2-202ENST00000345239 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0.01
GFM2-202ENST00000345239 IGF1RP08069 1367 aa15.07■□□□□ 0
GFM2-202ENST00000345239 GRIN2BQ13224 1484 aa15.07■□□□□ 0
GFM2-202ENST00000345239 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
GFM2-202ENST00000345239 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
GFM2-202ENST00000345239 RAPGEF2Q9Y4G8 1499 aa15.02■□□□□ -0
GFM2-202ENST00000345239 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
GFM2-202ENST00000345239 TNIKQ9UKE5 1360 aa14.99□□□□□ -0.01
GFM2-202ENST00000345239 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
GFM2-202ENST00000345239 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
GFM2-202ENST00000345239 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
GFM2-202ENST00000345239 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.01
GFM2-202ENST00000345239 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
GFM2-202ENST00000345239 SYNJ2O15056 1496 aa14.92□□□□□ -0.02
GFM2-202ENST00000345239 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
GFM2-202ENST00000345239 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
GFM2-202ENST00000345239 EFCAB5A4FU69 1503 aa14.85□□□□□ -0.03
GFM2-202ENST00000345239 NUP160Q12769 1436 aa14.84□□□□□ -0.03
GFM2-202ENST00000345239 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
GFM2-202ENST00000345239 CHD1O14646 1710 aa14.83□□□□□ -0.04
GFM2-202ENST00000345239 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
GFM2-202ENST00000345239 SAMD9Q5K651 1589 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms