Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.683e-7■■■□□ 19.2
XRN2Q9H0D6 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.691e-8■■■□□ 19.2
XRN2Q9H0D6 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.721e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC10.33□□□□□ -0.761e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-219ENST00000578901 728 ntTSL 1 (best)10.2□□□□□ -0.781e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-210ENST00000554394 954 ntTSL 39.5□□□□□ -0.893e-7■■■□□ 19.2
XRN2Q9H0D6 KANSL1-217ENST00000638269 3365 ntTSL 59.45□□□□□ -0.91e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.911e-8■■■□□ 19.2
XRN2Q9H0D6 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.3□□□□□ -0.921e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-220ENST00000556032 643 ntTSL 59.06□□□□□ -0.961e-8■■■□□ 19.2
XRN2Q9H0D6 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.961e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-226ENST00000639375 3392 ntTSL 58.87□□□□□ -0.991e-8■■■□□ 19.2
XRN2Q9H0D6 BAG6-238ENST00000422948 513 ntTSL 28.48□□□□□ -1.051e-8■■■□□ 19.2
XRN2Q9H0D6 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.081e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.123e-7■■■□□ 19.2
XRN2Q9H0D6 PRMT5-223ENST00000556616 571 ntTSL 47.75□□□□□ -1.171e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.223e-7■■■□□ 19.2
XRN2Q9H0D6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.291e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-220ENST00000556112 568 ntTSL 44.96□□□□□ -1.623e-7■■■□□ 19.2
XRN2Q9H0D6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.92■■□□□ 1.11e-8■■■□□ 19.2
XRN2Q9H0D6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.85■□□□□ 0.931e-8■■■□□ 19.2
XRN2Q9H0D6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.77■■□□□ 1.074e-8■■■□□ 19.2
XRN2Q9H0D6 EEF1D-249ENST00000533749 633 ntTSL 520.69■□□□□ 0.97e-7■■■□□ 19.2
XRN2Q9H0D6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.3■■□□□ 1.644e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.91■■□□□ 1.264e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.24e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.994e-11■■■□□ 19.2
XRN2Q9H0D6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.24■□□□□ 0.515e-6■■■□□ 19.2
XRN2Q9H0D6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.364e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.094e-6■■■□□ 19.2
XRN2Q9H0D6 PKM-222ENST00000568883 1863 ntTSL 5 BASIC12.72□□□□□ -0.374e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-219ENST00000567118 2254 ntTSL 212.2□□□□□ -0.464e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-205ENST00000561609 1568 ntTSL 1 (best)12.1□□□□□ -0.474e-6■■■□□ 19.2
XRN2Q9H0D6 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.484e-11■■■□□ 19.2
XRN2Q9H0D6 PKM-212ENST00000564440 3016 ntTSL 1 (best)9.8□□□□□ -0.844e-6■■■□□ 19.2
XRN2Q9H0D6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.84e-8■■■□□ 19.2
XRN2Q9H0D6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.224e-8■■■□□ 19.2
XRN2Q9H0D6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.171e-9■■■□□ 19.1
XRN2Q9H0D6 PANK3-203ENST00000522176 552 ntTSL 513.53□□□□□ -0.243e-9■■■□□ 19.1
XRN2Q9H0D6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.4■■□□□ 1.188e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-226ENST00000631619 2457 ntTSL 517.66■□□□□ 0.428e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)16.56■□□□□ 0.248e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-219ENST00000477127 1464 ntTSL 516.29■□□□□ 0.28e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.018e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)14.33□□□□□ -0.128e-7■■■□□ 19.1
XRN2Q9H0D6 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)12.74□□□□□ -0.378e-7■■■□□ 19.1
XRN2Q9H0D6 SLC3A2-214ENST00000539507 534 ntTSL 38.33□□□□□ -1.081e-20■■■□□ 19.1
XRN2Q9H0D6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.082e-6■■■□□ 19.1
XRN2Q9H0D6 AKT1-204ENST00000544168 1564 ntTSL 219.64■□□□□ 0.735e-6■■■□□ 19.1
XRN2Q9H0D6 AKT1-218ENST00000557552 8396 ntTSL 516.76■□□□□ 0.275e-6■■■□□ 19.1
XRN2Q9H0D6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.86e-7■■■□□ 19.1
XRN2Q9H0D6 USP36-214ENST00000589225 5885 ntTSL 1 (best)14.55□□□□□ -0.086e-7■■■□□ 19.1
XRN2Q9H0D6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.146e-7■■■□□ 19.1
XRN2Q9H0D6 SKI-204ENST00000508416 252 ntTSL 312.19□□□□□ -0.461e-6■■■□□ 19.1
XRN2Q9H0D6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.02■□□□□ 0.645e-6■■■□□ 19.1
XRN2Q9H0D6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.055e-6■■■□□ 19.1
XRN2Q9H0D6 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC12.76□□□□□ -0.375e-6■■■□□ 19.1
XRN2Q9H0D6 FBXO18-208ENST00000470089 979 ntTSL 534.54■■■■□ 3.126e-9■■■□□ 19.1
XRN2Q9H0D6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.34■□□□□ 0.216e-9■■■□□ 19.1
XRN2Q9H0D6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.176e-9■■■□□ 19.1
XRN2Q9H0D6 FBXO18-206ENST00000462507 906 ntTSL 215.35■□□□□ 0.056e-9■■■□□ 19.1
XRN2Q9H0D6 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.01□□□□□ -0.493e-6■■■□□ 19.1
XRN2Q9H0D6 LTB4R2-203ENST00000530080 1108 ntTSL 1 (best)33.88■■■■□ 3.013e-7■■■□□ 19.1
XRN2Q9H0D6 AKT1-215ENST00000555926 553 ntTSL 323.5■■□□□ 1.352e-6■■■□□ 19.1
XRN2Q9H0D6 LPCAT1-206ENST00000514484 756 ntTSL 322.41■■□□□ 1.187e-7■■■□□ 19.1
XRN2Q9H0D6 ETV4-206ENST00000585508 760 ntTSL 522.68■■□□□ 1.223e-7■■■□□ 19.1
XRN2Q9H0D6 ETV4-210ENST00000590236 616 ntTSL 319.23■□□□□ 0.673e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-216ENST00000475195 762 ntTSL 219.29■□□□□ 0.682e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-203ENST00000400772 625 ntTSL 418.89■□□□□ 0.612e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-214ENST00000465399 581 ntTSL 217.37■□□□□ 0.372e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-218ENST00000479554 556 ntTSL 417.25■□□□□ 0.352e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-208ENST00000419606 553 ntTSL 414.43□□□□□ -0.12e-7■■■□□ 19.1
XRN2Q9H0D6 ATG4B-207ENST00000415107 356 ntTSL 513.63□□□□□ -0.232e-7■■■□□ 19.1
XRN2Q9H0D6 DDX39A-214ENST00000590556 575 ntTSL 221.88■■□□□ 1.099e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-206ENST00000587730 1813 ntTSL 1 (best)18.42■□□□□ 0.549e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-208ENST00000588692 1478 ntTSL 517.19■□□□□ 0.349e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-221ENST00000593026 657 ntTSL 317.17■□□□□ 0.349e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-217ENST00000592391 1080 ntTSL 517.06■□□□□ 0.329e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-213ENST00000590315 566 ntTSL 514.68□□□□□ -0.069e-7■■■□□ 19
XRN2Q9H0D6 DDX39A-219ENST00000592927 823 ntTSL 313.97□□□□□ -0.179e-7■■■□□ 19
XRN2Q9H0D6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.883e-6■■■□□ 19
XRN2Q9H0D6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.643e-6■■■□□ 19
XRN2Q9H0D6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.79■□□□□ 0.443e-6■■■□□ 19
XRN2Q9H0D6 TEAD4-204ENST00000443986 641 ntTSL 315.85■□□□□ 0.133e-6■■■□□ 19
XRN2Q9H0D6 TEAD4-208ENST00000544666 567 ntTSL 514.48□□□□□ -0.093e-6■■■□□ 19
XRN2Q9H0D6 AMBP-202ENST00000466610 579 ntTSL 312.97□□□□□ -0.335e-7■■■□□ 19
XRN2Q9H0D6 DEF8-221ENST00000567999 578 ntTSL 1 (best)25.54■■□□□ 1.682e-7■■■□□ 19
XRN2Q9H0D6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.51■■□□□ 1.032e-7■■■□□ 19
XRN2Q9H0D6 DEF8-224ENST00000569061 651 ntTSL 521.35■■□□□ 1.012e-7■■■□□ 19
XRN2Q9H0D6 DEF8-204ENST00000561784 612 ntTSL 420.62■□□□□ 0.892e-7■■■□□ 19
XRN2Q9H0D6 DEF8-203ENST00000561741 580 ntTSL 419.14■□□□□ 0.652e-7■■■□□ 19
XRN2Q9H0D6 DEF8-217ENST00000566820 549 ntTSL 419.03■□□□□ 0.642e-7■■■□□ 19
XRN2Q9H0D6 DEF8-208ENST00000562578 573 ntTSL 419.03■□□□□ 0.642e-7■■■□□ 19
XRN2Q9H0D6 DEF8-216ENST00000566079 516 ntTSL 519.03■□□□□ 0.642e-7■■■□□ 19
XRN2Q9H0D6 DEF8-209ENST00000562986 468 ntTSL 418.88■□□□□ 0.612e-7■■■□□ 19
XRN2Q9H0D6 DEF8-222ENST00000568096 543 ntTSL 518.76■□□□□ 0.592e-7■■■□□ 19
XRN2Q9H0D6 DEF8-220ENST00000567884 572 ntTSL 517.67■□□□□ 0.422e-7■■■□□ 19
XRN2Q9H0D6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.58■□□□□ 0.42e-7■■■□□ 19
XRN2Q9H0D6 DEF8-226ENST00000569803 539 ntTSL 516.88■□□□□ 0.292e-7■■■□□ 19
XRN2Q9H0D6 DEF8-218ENST00000567243 550 ntTSL 515.82■□□□□ 0.122e-7■■■□□ 19
Retrieved 100 of 21,068 protein–RNA pairs in 89.9 ms