RNA–Protein interactions for RNA: ENST00000461804.5

CCNL1-203, Transcript of cyclin L1, humanhuman

TSL 2 BASIC

Gene CCNL1, Length 1,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-203ENST00000461804 NISCHQ9Y2I1 1504 aa47.65■■■■■ 5.22
CCNL1-203ENST00000461804 CCDC180Q9P1Z9 1646 aa41.39■■■■■ 4.22
CCNL1-203ENST00000461804 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4.01
CCNL1-203ENST00000461804 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
CCNL1-203ENST00000461804 DCAF1Q9Y4B6 1507 aa39.32■■■■□ 3.89
CCNL1-203ENST00000461804 SHROOM4Q9ULL8 1493 aa39.16■■■■□ 3.86
CCNL1-203ENST00000461804 ABCC9O60706 1549 aa39.11■■■■□ 3.85
CCNL1-203ENST00000461804 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.8
CCNL1-203ENST00000461804 NACADO15069 1562 aa38.52■■■■□ 3.76
CCNL1-203ENST00000461804 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
CCNL1-203ENST00000461804 RB1CC1Q8TDY2 1594 aa38.16■■■■□ 3.7
CCNL1-203ENST00000461804 SUPT5HO00267 1087 aaKnown RBP37.74■■■■□ 3.63
CCNL1-203ENST00000461804 UNC13AQ9UPW8 1703 aa37.48■■■■□ 3.59
CCNL1-203ENST00000461804 CECR2Q9BXF3 1484 aa37.09■■■■□ 3.53
CCNL1-203ENST00000461804 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
CCNL1-203ENST00000461804 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.52
CCNL1-203ENST00000461804 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.518e-6■□□□□ 8.9
CCNL1-203ENST00000461804 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
CCNL1-203ENST00000461804 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
CCNL1-203ENST00000461804 SMARCA4P51532 1647 aa36.6■■■■□ 3.45
CCNL1-203ENST00000461804 WIZO95785 1651 aa36.59■■■■□ 3.45
CCNL1-203ENST00000461804 CHIC1Q5VXU3 224 aa36.18■■■■□ 3.38
CCNL1-203ENST00000461804 TOP2AP11388 1531 aaKnown RBP36.15■■■■□ 3.38
CCNL1-203ENST00000461804 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
CCNL1-203ENST00000461804 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
CCNL1-203ENST00000461804 EIF4G1Q04637 1599 aaKnown RBP35.92■■■■□ 3.34
CCNL1-203ENST00000461804 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
CCNL1-203ENST00000461804 CCDC88BA6NC98 1476 aa35.83■■■■□ 3.33
CCNL1-203ENST00000461804 BAZ1BQ9UIG0 1483 aaKnown RBP35.76■■■■□ 3.31
CCNL1-203ENST00000461804 NCAPD3P42695 1498 aa35.57■■■■□ 3.28
CCNL1-203ENST00000461804 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
CCNL1-203ENST00000461804 TRIM41Q8WV44 630 aa35.41■■■■□ 3.26
CCNL1-203ENST00000461804 CC2D2AQ9P2K1 1620 aa35.36■■■■□ 3.25
CCNL1-203ENST00000461804 ABCC8Q09428 1581 aa35.2■■■■□ 3.23
CCNL1-203ENST00000461804 WRNQ14191 1432 aaPredicted RBP eCLIP34.88■■■■□ 3.172e-6■■■■□ 22.3
CCNL1-203ENST00000461804 LOC105371045A0A1W2PR82 267 aa34.87■■■■□ 3.17
CCNL1-203ENST00000461804 CFTRP13569 1480 aa34.86■■■■□ 3.17
CCNL1-203ENST00000461804 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
CCNL1-203ENST00000461804 SYNJ1O43426 1573 aa34.76■■■■□ 3.16
CCNL1-203ENST00000461804 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.14
CCNL1-203ENST00000461804 PRDM2Q13029 1718 aa34.66■■■■□ 3.14
CCNL1-203ENST00000461804 SOGA1O94964 1423 aa34.57■■■■□ 3.12
CCNL1-203ENST00000461804 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
CCNL1-203ENST00000461804 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
CCNL1-203ENST00000461804 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
CCNL1-203ENST00000461804 CUX1P39880 1505 aa34.46■■■■□ 3.11
CCNL1-203ENST00000461804 RUSC2Q8N2Y8 1516 aa34.45■■■■□ 3.1
CCNL1-203ENST00000461804 EHMT2Q96KQ7 1210 aa34.43■■■■□ 3.1
CCNL1-203ENST00000461804 NESP48681 1621 aa34.42■■■■□ 3.1
CCNL1-203ENST00000461804 EEA1Q15075 1411 aa34.4■■■■□ 3.1
CCNL1-203ENST00000461804 FANCD2Q9BXW9 1451 aa34.34■■■■□ 3.09
CCNL1-203ENST00000461804 LAMC3Q9Y6N6 1575 aa34.32■■■■□ 3.08
CCNL1-203ENST00000461804 CSRNP3Q8WYN3 585 aa34.27■■■■□ 3.08
CCNL1-203ENST00000461804 CEP164Q9UPV0 1460 aa34.08■■■■□ 3.05
CCNL1-203ENST00000461804 PDS5BQ9NTI5 1447 aa34.05■■■■□ 3.04
CCNL1-203ENST00000461804 FGD5Q6ZNL6 1462 aa34.04■■■■□ 3.04
CCNL1-203ENST00000461804 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
CCNL1-203ENST00000461804 GOLGA3Q08378 1498 aa34■■■■□ 3.03
CCNL1-203ENST00000461804 KIF21BO75037 1637 aa33.99■■■■□ 3.03
CCNL1-203ENST00000461804 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
CCNL1-203ENST00000461804 KIF21AQ7Z4S6 1674 aa33.97■■■■□ 3.03
CCNL1-203ENST00000461804 KIF27Q86VH2 1401 aa33.95■■■■□ 3.03
CCNL1-203ENST00000461804 URB2Q14146 1524 aaKnown RBP33.92■■■■□ 3.02
CCNL1-203ENST00000461804 TNIKQ9UKE5 1360 aa33.92■■■■□ 3.02
CCNL1-203ENST00000461804 UBTFP17480 764 aaKnown RBP33.89■■■■□ 3.02
CCNL1-203ENST00000461804 CUX2O14529 1486 aa33.86■■■■□ 3.01
CCNL1-203ENST00000461804 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
CCNL1-203ENST00000461804 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
CCNL1-203ENST00000461804 CEP162Q5TB80 1403 aa33.8■■■■□ 3
CCNL1-203ENST00000461804 PRXQ9BXM0 1461 aa33.79■■■■□ 3
CCNL1-203ENST00000461804 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
CCNL1-203ENST00000461804 ERICH3Q5RHP9 1530 aa33.72■■■□□ 2.99
CCNL1-203ENST00000461804 ABCA10Q8WWZ4 1543 aa33.71■■■□□ 2.99
CCNL1-203ENST00000461804 IGF1RP08069 1367 aa33.66■■■□□ 2.98
CCNL1-203ENST00000461804 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
CCNL1-203ENST00000461804 WDR97A6NE52 1622 aa33.59■■■□□ 2.97
CCNL1-203ENST00000461804 CARMIL1Q5VZK9 1371 aa33.49■■■□□ 2.95
CCNL1-203ENST00000461804 CLIP1P30622 1438 aa33.48■■■□□ 2.95
CCNL1-203ENST00000461804 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
CCNL1-203ENST00000461804 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
CCNL1-203ENST00000461804 TARBP1Q13395 1621 aaKnown RBP33.46■■■□□ 2.95
CCNL1-203ENST00000461804 WDR62O43379 1518 aa33.45■■■□□ 2.94
CCNL1-203ENST00000461804 TDRD9Q8NDG6 1382 aaKnown RBP33.44■■■□□ 2.94
CCNL1-203ENST00000461804 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
CCNL1-203ENST00000461804 RANGAP1P46060 587 aaPredicted RBP33.38■■■□□ 2.93
CCNL1-203ENST00000461804 GAPVD1Q14C86 1478 aa33.35■■■□□ 2.93
CCNL1-203ENST00000461804 CUL7Q14999 1698 aa33.34■■■□□ 2.93
CCNL1-203ENST00000461804 TRIM26Q12899 539 aaPredicted RBP33.33■■■□□ 2.93
CCNL1-203ENST00000461804 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.92
CCNL1-203ENST00000461804 PPARGC1BQ86YN6 1023 aaKnown RBP33.28■■■□□ 2.92
CCNL1-203ENST00000461804 IFT140Q96RY7 1462 aa33.24■■■□□ 2.91
CCNL1-203ENST00000461804 VPS8Q8N3P4 1428 aa33.21■■■□□ 2.91
CCNL1-203ENST00000461804 AQRO60306 1485 aaKnown RBP eCLIP33.19■■■□□ 2.93e-8■■■■■ 39.2
CCNL1-203ENST00000461804 PBRM1Q86U86 1689 aa33.16■■■□□ 2.9
CCNL1-203ENST00000461804 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
CCNL1-203ENST00000461804 ZNF608Q9ULD9 1512 aaPredicted RBP33.14■■■□□ 2.9
CCNL1-203ENST00000461804 ARHGAP35Q9NRY4 1499 aa33.1■■■□□ 2.89
CCNL1-203ENST00000461804 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
CCNL1-203ENST00000461804 CTTNBP2Q8WZ74 1663 aa33.02■■■□□ 2.88
CCNL1-203ENST00000461804 EIF4G3O43432 1585 aaKnown RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms