RNA–Protein interactions for RNA: ENST00000567884.5

DEF8-220, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 5

Gene DEF8, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-220ENST00000567884 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
DEF8-220ENST00000567884 ABCC9O60706 1549 aa33.3■■■□□ 2.92
DEF8-220ENST00000567884 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
DEF8-220ENST00000567884 DNAJC5BQ9UF47 199 aa32.02■■■□□ 2.72
DEF8-220ENST00000567884 RB1CC1Q8TDY2 1594 aa31.4■■■□□ 2.62
DEF8-220ENST00000567884 NACADO15069 1562 aa30.96■■■□□ 2.55
DEF8-220ENST00000567884 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
DEF8-220ENST00000567884 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
DEF8-220ENST00000567884 DCAF8L2P0C7V8 631 aa30.55■■■□□ 2.48
DEF8-220ENST00000567884 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
DEF8-220ENST00000567884 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
DEF8-220ENST00000567884 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.43
DEF8-220ENST00000567884 CECR2Q9BXF3 1484 aa30.14■■■□□ 2.42
DEF8-220ENST00000567884 CC2D2AQ9P2K1 1620 aa30.09■■■□□ 2.41
DEF8-220ENST00000567884 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
DEF8-220ENST00000567884 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
DEF8-220ENST00000567884 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
DEF8-220ENST00000567884 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
DEF8-220ENST00000567884 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
DEF8-220ENST00000567884 CUX2O14529 1486 aa29.17■■■□□ 2.26
DEF8-220ENST00000567884 ERCC6Q03468 1493 aa28.89■■■□□ 2.22
DEF8-220ENST00000567884 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
DEF8-220ENST00000567884 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
DEF8-220ENST00000567884 NESP48681 1621 aa28.32■■■□□ 2.12
DEF8-220ENST00000567884 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
DEF8-220ENST00000567884 THOC2Q8NI27 1593 aaKnown RBP28.27■■■□□ 2.12
DEF8-220ENST00000567884 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
DEF8-220ENST00000567884 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
DEF8-220ENST00000567884 LAMC3Q9Y6N6 1575 aa28.1■■■□□ 2.09
DEF8-220ENST00000567884 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
DEF8-220ENST00000567884 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
DEF8-220ENST00000567884 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
DEF8-220ENST00000567884 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
DEF8-220ENST00000567884 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
DEF8-220ENST00000567884 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
DEF8-220ENST00000567884 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
DEF8-220ENST00000567884 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
DEF8-220ENST00000567884 WDR62O43379 1518 aa27.69■■■□□ 2.02
DEF8-220ENST00000567884 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
DEF8-220ENST00000567884 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
DEF8-220ENST00000567884 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
DEF8-220ENST00000567884 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
DEF8-220ENST00000567884 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
DEF8-220ENST00000567884 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
DEF8-220ENST00000567884 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
DEF8-220ENST00000567884 ARHGEF11O15085 1522 aa27.2■■□□□ 1.94
DEF8-220ENST00000567884 CFTRP13569 1480 aa27.13■■□□□ 1.93
DEF8-220ENST00000567884 WIZO95785 1651 aa27.12■■□□□ 1.93
DEF8-220ENST00000567884 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
DEF8-220ENST00000567884 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
DEF8-220ENST00000567884 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
DEF8-220ENST00000567884 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
DEF8-220ENST00000567884 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
DEF8-220ENST00000567884 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
DEF8-220ENST00000567884 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
DEF8-220ENST00000567884 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
DEF8-220ENST00000567884 CHD1O14646 1710 aa26.78■■□□□ 1.88
DEF8-220ENST00000567884 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
DEF8-220ENST00000567884 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
DEF8-220ENST00000567884 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
DEF8-220ENST00000567884 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
DEF8-220ENST00000567884 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
DEF8-220ENST00000567884 FBLN2P98095 1184 aa26.63■■□□□ 1.85
DEF8-220ENST00000567884 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.842e-8■■■■■ 55
DEF8-220ENST00000567884 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
DEF8-220ENST00000567884 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
DEF8-220ENST00000567884 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
DEF8-220ENST00000567884 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
DEF8-220ENST00000567884 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
DEF8-220ENST00000567884 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
DEF8-220ENST00000567884 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
DEF8-220ENST00000567884 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
DEF8-220ENST00000567884 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
DEF8-220ENST00000567884 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
DEF8-220ENST00000567884 SOGA1O94964 1423 aa26.24■■□□□ 1.79
DEF8-220ENST00000567884 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
DEF8-220ENST00000567884 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
DEF8-220ENST00000567884 GAPVD1Q14C86 1478 aa26.22■■□□□ 1.79
DEF8-220ENST00000567884 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
DEF8-220ENST00000567884 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
DEF8-220ENST00000567884 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
DEF8-220ENST00000567884 PBRM1Q86U86 1689 aa25.98■■□□□ 1.75
DEF8-220ENST00000567884 KIF13AQ9H1H9 1805 aa25.94■■□□□ 1.74
DEF8-220ENST00000567884 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
DEF8-220ENST00000567884 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
DEF8-220ENST00000567884 CUX1P39880 1505 aa25.86■■□□□ 1.73
DEF8-220ENST00000567884 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
DEF8-220ENST00000567884 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
DEF8-220ENST00000567884 ABCA5Q8WWZ7 1642 aa25.76■■□□□ 1.71
DEF8-220ENST00000567884 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
DEF8-220ENST00000567884 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
DEF8-220ENST00000567884 KDM4FA0A1W2PPD8 638 aa25.71■■□□□ 1.71
DEF8-220ENST00000567884 NUP160Q12769 1436 aa25.71■■□□□ 1.71
DEF8-220ENST00000567884 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
DEF8-220ENST00000567884 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
DEF8-220ENST00000567884 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
DEF8-220ENST00000567884 NPM1P06748 294 aaKnown RBP eCLIP25.62■■□□□ 1.69
DEF8-220ENST00000567884 KDM6BO15054 1643 aa25.6■■□□□ 1.69
DEF8-220ENST00000567884 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
DEF8-220ENST00000567884 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms