RNA–Protein interactions for RNA: ENST00000554394.5

NUMB-210, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-210ENST00000554394 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
NUMB-210ENST00000554394 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
NUMB-210ENST00000554394 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
NUMB-210ENST00000554394 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
NUMB-210ENST00000554394 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
NUMB-210ENST00000554394 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
NUMB-210ENST00000554394 ABCC9O60706 1549 aa16.98■□□□□ 0.31
NUMB-210ENST00000554394 FOXD1Q16676 465 aa16.78■□□□□ 0.28
NUMB-210ENST00000554394 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
NUMB-210ENST00000554394 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
NUMB-210ENST00000554394 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
NUMB-210ENST00000554394 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
NUMB-210ENST00000554394 NACADO15069 1562 aa16.53■□□□□ 0.24
NUMB-210ENST00000554394 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
NUMB-210ENST00000554394 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
NUMB-210ENST00000554394 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
NUMB-210ENST00000554394 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
NUMB-210ENST00000554394 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
NUMB-210ENST00000554394 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
NUMB-210ENST00000554394 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
NUMB-210ENST00000554394 ADRA2BP18089 450 aa15.92■□□□□ 0.14
NUMB-210ENST00000554394 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
NUMB-210ENST00000554394 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
NUMB-210ENST00000554394 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
NUMB-210ENST00000554394 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
NUMB-210ENST00000554394 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
NUMB-210ENST00000554394 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
NUMB-210ENST00000554394 MSH5O43196 834 aa15.46■□□□□ 0.07
NUMB-210ENST00000554394 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
NUMB-210ENST00000554394 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
NUMB-210ENST00000554394 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
NUMB-210ENST00000554394 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.05
NUMB-210ENST00000554394 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
NUMB-210ENST00000554394 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
NUMB-210ENST00000554394 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
NUMB-210ENST00000554394 WIZO95785 1651 aa15.29■□□□□ 0.04
NUMB-210ENST00000554394 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
NUMB-210ENST00000554394 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
NUMB-210ENST00000554394 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
NUMB-210ENST00000554394 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
NUMB-210ENST00000554394 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
NUMB-210ENST00000554394 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
NUMB-210ENST00000554394 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
NUMB-210ENST00000554394 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
NUMB-210ENST00000554394 CFTRP13569 1480 aa14.82□□□□□ -0.04
NUMB-210ENST00000554394 NESP48681 1621 aa14.8□□□□□ -0.04
NUMB-210ENST00000554394 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
NUMB-210ENST00000554394 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
NUMB-210ENST00000554394 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
NUMB-210ENST00000554394 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
NUMB-210ENST00000554394 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
NUMB-210ENST00000554394 ERCC6Q03468 1493 aa14.6□□□□□ -0.07
NUMB-210ENST00000554394 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
NUMB-210ENST00000554394 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
NUMB-210ENST00000554394 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
NUMB-210ENST00000554394 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
NUMB-210ENST00000554394 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
NUMB-210ENST00000554394 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
NUMB-210ENST00000554394 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
NUMB-210ENST00000554394 CUX1P39880 1505 aa14.48□□□□□ -0.09
NUMB-210ENST00000554394 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
NUMB-210ENST00000554394 WDR62O43379 1518 aa14.47□□□□□ -0.09
NUMB-210ENST00000554394 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
NUMB-210ENST00000554394 TOPBP1Q92547 1522 aa14.46□□□□□ -0.09
NUMB-210ENST00000554394 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
NUMB-210ENST00000554394 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
NUMB-210ENST00000554394 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
NUMB-210ENST00000554394 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
NUMB-210ENST00000554394 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
NUMB-210ENST00000554394 CUX2O14529 1486 aa14.35□□□□□ -0.11
NUMB-210ENST00000554394 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
NUMB-210ENST00000554394 KCNA4P22459 653 aa14.34□□□□□ -0.11
NUMB-210ENST00000554394 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
NUMB-210ENST00000554394 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
NUMB-210ENST00000554394 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
NUMB-210ENST00000554394 SOGA1O94964 1423 aa14.29□□□□□ -0.12
NUMB-210ENST00000554394 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
NUMB-210ENST00000554394 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
NUMB-210ENST00000554394 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
NUMB-210ENST00000554394 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
NUMB-210ENST00000554394 ZNF608Q9ULD9 1512 aaPredicted RBP14.21□□□□□ -0.13
NUMB-210ENST00000554394 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
NUMB-210ENST00000554394 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
NUMB-210ENST00000554394 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
NUMB-210ENST00000554394 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.142e-7■■■■□ 23.8
NUMB-210ENST00000554394 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
NUMB-210ENST00000554394 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
NUMB-210ENST00000554394 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
NUMB-210ENST00000554394 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
NUMB-210ENST00000554394 EEA1Q15075 1411 aa14.09□□□□□ -0.15
NUMB-210ENST00000554394 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
NUMB-210ENST00000554394 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
NUMB-210ENST00000554394 IGF1RP08069 1367 aa14.07□□□□□ -0.16
NUMB-210ENST00000554394 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
NUMB-210ENST00000554394 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
NUMB-210ENST00000554394 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
NUMB-210ENST00000554394 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
NUMB-210ENST00000554394 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
NUMB-210ENST00000554394 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
NUMB-210ENST00000554394 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms