RNA–Protein interactions for RNA: ENST00000397269.7

FBXO18-203, Transcript of F-box DNA helicase 1, humanhuman

TSL 5 BASIC

Gene FBXO18, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO18-203ENST00000397269 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
FBXO18-203ENST00000397269 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
FBXO18-203ENST00000397269 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
FBXO18-203ENST00000397269 HRCP23327 699 aa28.62■■■□□ 2.17
FBXO18-203ENST00000397269 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
FBXO18-203ENST00000397269 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
FBXO18-203ENST00000397269 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.15
FBXO18-203ENST00000397269 PCGF6Q9BYE7 350 aa28.35■■■□□ 2.13
FBXO18-203ENST00000397269 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
FBXO18-203ENST00000397269 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
FBXO18-203ENST00000397269 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
FBXO18-203ENST00000397269 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
FBXO18-203ENST00000397269 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
FBXO18-203ENST00000397269 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
FBXO18-203ENST00000397269 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
FBXO18-203ENST00000397269 ABCC9O60706 1549 aa27.01■■□□□ 1.91
FBXO18-203ENST00000397269 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
FBXO18-203ENST00000397269 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
FBXO18-203ENST00000397269 EHMT2Q96KQ7 1210 aa26.92■■□□□ 1.9
FBXO18-203ENST00000397269 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
FBXO18-203ENST00000397269 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
FBXO18-203ENST00000397269 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
FBXO18-203ENST00000397269 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
FBXO18-203ENST00000397269 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
FBXO18-203ENST00000397269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
FBXO18-203ENST00000397269 CCER1Q8TC90 406 aaPredicted RBP26.37■■□□□ 1.81
FBXO18-203ENST00000397269 ACIN1Q9UKV3 1341 aaKnown RBP26.31■■□□□ 1.8
FBXO18-203ENST00000397269 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
FBXO18-203ENST00000397269 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
FBXO18-203ENST00000397269 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
FBXO18-203ENST00000397269 TTBK1Q5TCY1 1321 aaPredicted RBP26.19■■□□□ 1.78
FBXO18-203ENST00000397269 DIEXFQ68CQ4 756 aaKnown RBP26.15■■□□□ 1.78
FBXO18-203ENST00000397269 WIZO95785 1651 aa26.14■■□□□ 1.78
FBXO18-203ENST00000397269 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
FBXO18-203ENST00000397269 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
FBXO18-203ENST00000397269 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
FBXO18-203ENST00000397269 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.74
FBXO18-203ENST00000397269 NACADO15069 1562 aa25.87■■□□□ 1.73
FBXO18-203ENST00000397269 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
FBXO18-203ENST00000397269 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
FBXO18-203ENST00000397269 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
FBXO18-203ENST00000397269 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
FBXO18-203ENST00000397269 YTHDC1Q96MU7 727 aaKnown RBP25.77■■□□□ 1.72
FBXO18-203ENST00000397269 ZNF316A6NFI3 1004 aaPredicted RBP25.74■■□□□ 1.71
FBXO18-203ENST00000397269 SOGA1O94964 1423 aa25.7■■□□□ 1.71
FBXO18-203ENST00000397269 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
FBXO18-203ENST00000397269 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.7
FBXO18-203ENST00000397269 TOP2AP11388 1531 aaKnown RBP25.59■■□□□ 1.69
FBXO18-203ENST00000397269 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
FBXO18-203ENST00000397269 MYT1Q01538 1121 aa25.57■■□□□ 1.68
FBXO18-203ENST00000397269 CSRNP3Q8WYN3 585 aa25.55■■□□□ 1.68
FBXO18-203ENST00000397269 MIER1Q8N108 512 aa25.54■■□□□ 1.68
FBXO18-203ENST00000397269 HNRNPUL2Q1KMD3 747 aaKnown RBP25.53■■□□□ 1.68
FBXO18-203ENST00000397269 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
FBXO18-203ENST00000397269 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
FBXO18-203ENST00000397269 EEA1Q15075 1411 aa25.42■■□□□ 1.66
FBXO18-203ENST00000397269 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
FBXO18-203ENST00000397269 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.643e-7■■■■□ 26.7
FBXO18-203ENST00000397269 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
FBXO18-203ENST00000397269 CLIP1P30622 1438 aa25.21■■□□□ 1.63
FBXO18-203ENST00000397269 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
FBXO18-203ENST00000397269 APLP2Q06481 763 aa25.17■■□□□ 1.62
FBXO18-203ENST00000397269 VPS8Q8N3P4 1428 aa25.13■■□□□ 1.61
FBXO18-203ENST00000397269 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
FBXO18-203ENST00000397269 KIF21BO75037 1637 aa25.1■■□□□ 1.61
FBXO18-203ENST00000397269 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
FBXO18-203ENST00000397269 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
FBXO18-203ENST00000397269 SUPT16HQ9Y5B9 1047 aaKnown RBP24.95■■□□□ 1.58
FBXO18-203ENST00000397269 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
FBXO18-203ENST00000397269 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
FBXO18-203ENST00000397269 CLSPNQ9HAW4 1339 aa24.82■■□□□ 1.56
FBXO18-203ENST00000397269 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
FBXO18-203ENST00000397269 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
FBXO18-203ENST00000397269 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
FBXO18-203ENST00000397269 TSHZ2Q9NRE2 1034 aa24.72■■□□□ 1.55
FBXO18-203ENST00000397269 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
FBXO18-203ENST00000397269 ITGAEP38570 1179 aa24.68■■□□□ 1.54
FBXO18-203ENST00000397269 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
FBXO18-203ENST00000397269 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
FBXO18-203ENST00000397269 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
FBXO18-203ENST00000397269 BCANQ96GW7 911 aa24.59■■□□□ 1.53
FBXO18-203ENST00000397269 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
FBXO18-203ENST00000397269 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
FBXO18-203ENST00000397269 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
FBXO18-203ENST00000397269 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
FBXO18-203ENST00000397269 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
FBXO18-203ENST00000397269 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
FBXO18-203ENST00000397269 CUX2O14529 1486 aa24.48■■□□□ 1.51
FBXO18-203ENST00000397269 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
FBXO18-203ENST00000397269 FKBP8Q14318 412 aa24.44■■□□□ 1.5
FBXO18-203ENST00000397269 DDX10Q13206 875 aaKnown RBP24.42■■□□□ 1.5
FBXO18-203ENST00000397269 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
FBXO18-203ENST00000397269 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
FBXO18-203ENST00000397269 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
FBXO18-203ENST00000397269 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
FBXO18-203ENST00000397269 CUX1P39880 1505 aa24.34■■□□□ 1.49
FBXO18-203ENST00000397269 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
FBXO18-203ENST00000397269 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
FBXO18-203ENST00000397269 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
FBXO18-203ENST00000397269 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms