RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
DEF8-228ENST00000610455 ABCC9O60706 1549 aa39.97■■■■□ 3.99
DEF8-228ENST00000610455 CCDC180Q9P1Z9 1646 aa39.84■■■■□ 3.97
DEF8-228ENST00000610455 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
DEF8-228ENST00000610455 DNAJC5BQ9UF47 199 aa37.66■■■■□ 3.62
DEF8-228ENST00000610455 NACADO15069 1562 aa37.64■■■■□ 3.62
DEF8-228ENST00000610455 DCAF8L2P0C7V8 631 aa37.38■■■■□ 3.57
DEF8-228ENST00000610455 UNC13AQ9UPW8 1703 aa37.3■■■■□ 3.56
DEF8-228ENST00000610455 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
DEF8-228ENST00000610455 MYO15BQ96JP2 1530 aa37.03■■■■□ 3.52
DEF8-228ENST00000610455 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
DEF8-228ENST00000610455 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
DEF8-228ENST00000610455 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
DEF8-228ENST00000610455 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
DEF8-228ENST00000610455 SHROOM4Q9ULL8 1493 aa36.29■■■■□ 3.4
DEF8-228ENST00000610455 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
DEF8-228ENST00000610455 CECR2Q9BXF3 1484 aa36■■■■□ 3.35
DEF8-228ENST00000610455 EIF4G1Q04637 1599 aaKnown RBP35.99■■■■□ 3.35
DEF8-228ENST00000610455 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
DEF8-228ENST00000610455 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
DEF8-228ENST00000610455 ATAD2BQ9ULI0 1458 aa34.61■■■■□ 3.13
DEF8-228ENST00000610455 SMARCA4P51532 1647 aa34.59■■■■□ 3.13
DEF8-228ENST00000610455 SMARCA2P51531 1590 aa34.51■■■■□ 3.12
DEF8-228ENST00000610455 ERCC6Q03468 1493 aa34.5■■■■□ 3.11
DEF8-228ENST00000610455 CUX2O14529 1486 aa34.49■■■■□ 3.11
DEF8-228ENST00000610455 HMGXB3Q12766 1538 aa34.48■■■■□ 3.11
DEF8-228ENST00000610455 BAZ1AQ9NRL2 1556 aaPredicted RBP34.35■■■■□ 3.09
DEF8-228ENST00000610455 NESP48681 1621 aa34.31■■■■□ 3.08
DEF8-228ENST00000610455 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
DEF8-228ENST00000610455 PEG3Q9GZU2 1588 aa34.23■■■■□ 3.07
DEF8-228ENST00000610455 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
DEF8-228ENST00000610455 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
DEF8-228ENST00000610455 LAMC3Q9Y6N6 1575 aa34.02■■■■□ 3.04
DEF8-228ENST00000610455 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
DEF8-228ENST00000610455 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
DEF8-228ENST00000610455 WIZO95785 1651 aa33.75■■■□□ 2.99
DEF8-228ENST00000610455 CADPSQ9ULU8 1353 aa33.65■■■□□ 2.98
DEF8-228ENST00000610455 MRC2Q9UBG0 1479 aa33.52■■■□□ 2.96
DEF8-228ENST00000610455 WDR62O43379 1518 aa33.48■■■□□ 2.95
DEF8-228ENST00000610455 CEP164Q9UPV0 1460 aa33.36■■■□□ 2.93
DEF8-228ENST00000610455 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
DEF8-228ENST00000610455 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
DEF8-228ENST00000610455 CFTRP13569 1480 aa33.25■■■□□ 2.91
DEF8-228ENST00000610455 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
DEF8-228ENST00000610455 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
DEF8-228ENST00000610455 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
DEF8-228ENST00000610455 URB2Q14146 1524 aaKnown RBP33.07■■■□□ 2.88
DEF8-228ENST00000610455 OSCARQ8IYS5 282 aa32.86■■■□□ 2.85
DEF8-228ENST00000610455 CCDC88BA6NC98 1476 aa32.86■■■□□ 2.85
DEF8-228ENST00000610455 ZNF608Q9ULD9 1512 aaPredicted RBP32.69■■■□□ 2.82
DEF8-228ENST00000610455 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
DEF8-228ENST00000610455 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
DEF8-228ENST00000610455 RIMBP3CA6NJZ7 1639 aa32.57■■■□□ 2.8
DEF8-228ENST00000610455 RIMBP3BA6NNM3 1639 aa32.57■■■□□ 2.8
DEF8-228ENST00000610455 RIMBP3Q9UFD9 1639 aa32.57■■■□□ 2.8
DEF8-228ENST00000610455 DNMBPQ6XZF7 1577 aa32.54■■■□□ 2.8
DEF8-228ENST00000610455 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
DEF8-228ENST00000610455 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
DEF8-228ENST00000610455 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
DEF8-228ENST00000610455 CHD1O14646 1710 aa32.41■■■□□ 2.78
DEF8-228ENST00000610455 ARHGEF11O15085 1522 aa32.39■■■□□ 2.78
DEF8-228ENST00000610455 AQRO60306 1485 aaKnown RBP eCLIP32.35■■■□□ 2.772e-8■■■■■ 47.5
DEF8-228ENST00000610455 POLA1P09884 1462 aaPredicted RBP32.31■■■□□ 2.76
DEF8-228ENST00000610455 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
DEF8-228ENST00000610455 FBLN2P98095 1184 aa32.15■■■□□ 2.74
DEF8-228ENST00000610455 SOGA1O94964 1423 aa32.14■■■□□ 2.74
DEF8-228ENST00000610455 CYB5RLQ6IPT4 315 aa32.13■■■□□ 2.73
DEF8-228ENST00000610455 TDRD9Q8NDG6 1382 aaKnown RBP32.1■■■□□ 2.73
DEF8-228ENST00000610455 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
DEF8-228ENST00000610455 ARAP1Q96P48 1450 aa32.06■■■□□ 2.72
DEF8-228ENST00000610455 CUX1P39880 1505 aa32.05■■■□□ 2.72
DEF8-228ENST00000610455 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
DEF8-228ENST00000610455 SNAPC4Q5SXM2 1469 aa32.02■■■□□ 2.72
DEF8-228ENST00000610455 CLASP1Q7Z460 1538 aa31.93■■■□□ 2.7
DEF8-228ENST00000610455 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
DEF8-228ENST00000610455 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
DEF8-228ENST00000610455 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
DEF8-228ENST00000610455 SYNJ1O43426 1573 aa31.88■■■□□ 2.69
DEF8-228ENST00000610455 CHMP7Q8WUX9 453 aaPredicted RBP31.86■■■□□ 2.69
DEF8-228ENST00000610455 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
DEF8-228ENST00000610455 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
DEF8-228ENST00000610455 GAPVD1Q14C86 1478 aa31.76■■■□□ 2.67
DEF8-228ENST00000610455 ABCA5Q8WWZ7 1642 aa31.73■■■□□ 2.67
DEF8-228ENST00000610455 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
DEF8-228ENST00000610455 SUPT5HO00267 1087 aaKnown RBP31.66■■■□□ 2.66
DEF8-228ENST00000610455 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
DEF8-228ENST00000610455 WRNQ14191 1432 aaPredicted RBP eCLIP31.5■■■□□ 2.63
DEF8-228ENST00000610455 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
DEF8-228ENST00000610455 ADAMTS12P58397 1594 aa31.49■■■□□ 2.63
DEF8-228ENST00000610455 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
DEF8-228ENST00000610455 ERCC6L2Q5T890 1561 aa31.46■■■□□ 2.63
DEF8-228ENST00000610455 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
DEF8-228ENST00000610455 NUP160Q12769 1436 aa31.38■■■□□ 2.61
DEF8-228ENST00000610455 SHROOM2Q13796 1616 aa31.34■■■□□ 2.61
DEF8-228ENST00000610455 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.61
DEF8-228ENST00000610455 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
DEF8-228ENST00000610455 KIF13AQ9H1H9 1805 aa31.1■■■□□ 2.57
DEF8-228ENST00000610455 PRG4Q92954 1404 aaPredicted RBP31.09■■■□□ 2.57
DEF8-228ENST00000610455 RUSC2Q8N2Y8 1516 aa31.06■■■□□ 2.56
DEF8-228ENST00000610455 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms