RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
NUMB-212ENST00000554546 MYT1Q01538 1121 aa19.52■□□□□ 0.72
NUMB-212ENST00000554546 HRCP23327 699 aa19.3■□□□□ 0.68
NUMB-212ENST00000554546 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
NUMB-212ENST00000554546 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
NUMB-212ENST00000554546 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
NUMB-212ENST00000554546 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
NUMB-212ENST00000554546 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
NUMB-212ENST00000554546 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
NUMB-212ENST00000554546 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
NUMB-212ENST00000554546 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
NUMB-212ENST00000554546 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
NUMB-212ENST00000554546 NEUROD1Q13562 356 aa18■□□□□ 0.47
NUMB-212ENST00000554546 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
NUMB-212ENST00000554546 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
NUMB-212ENST00000554546 ERICH6Q7L0X2 663 aa17.8■□□□□ 0.44
NUMB-212ENST00000554546 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
NUMB-212ENST00000554546 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
NUMB-212ENST00000554546 APLP2Q06481 763 aa17.62■□□□□ 0.41
NUMB-212ENST00000554546 ANP32EQ9BTT0 268 aa17.58■□□□□ 0.4
NUMB-212ENST00000554546 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
NUMB-212ENST00000554546 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
NUMB-212ENST00000554546 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
NUMB-212ENST00000554546 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
NUMB-212ENST00000554546 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
NUMB-212ENST00000554546 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
NUMB-212ENST00000554546 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
NUMB-212ENST00000554546 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
NUMB-212ENST00000554546 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
NUMB-212ENST00000554546 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
NUMB-212ENST00000554546 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
NUMB-212ENST00000554546 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
NUMB-212ENST00000554546 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
NUMB-212ENST00000554546 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
NUMB-212ENST00000554546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
NUMB-212ENST00000554546 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
NUMB-212ENST00000554546 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
NUMB-212ENST00000554546 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
NUMB-212ENST00000554546 EIF5BO60841 1220 aaKnown RBP16.76■□□□□ 0.27
NUMB-212ENST00000554546 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
NUMB-212ENST00000554546 UBE2Q2Q8WVN8 375 aa16.74■□□□□ 0.27
NUMB-212ENST00000554546 MIER1Q8N108 512 aa16.74■□□□□ 0.27
NUMB-212ENST00000554546 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
NUMB-212ENST00000554546 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
NUMB-212ENST00000554546 RBM19Q9Y4C8 960 aaKnown RBP16.59■□□□□ 0.25
NUMB-212ENST00000554546 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
NUMB-212ENST00000554546 BCANQ96GW7 911 aa16.53■□□□□ 0.24
NUMB-212ENST00000554546 MSH5O43196 834 aa16.53■□□□□ 0.24
NUMB-212ENST00000554546 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
NUMB-212ENST00000554546 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
NUMB-212ENST00000554546 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
NUMB-212ENST00000554546 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
NUMB-212ENST00000554546 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
NUMB-212ENST00000554546 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
NUMB-212ENST00000554546 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
NUMB-212ENST00000554546 PODXL2Q9NZ53 605 aa16.32■□□□□ 0.2
NUMB-212ENST00000554546 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
NUMB-212ENST00000554546 FKBP8Q14318 412 aa16.28■□□□□ 0.2
NUMB-212ENST00000554546 IL27Q8NEV9 243 aa16.27■□□□□ 0.19
NUMB-212ENST00000554546 ITGAEP38570 1179 aa16.25■□□□□ 0.19
NUMB-212ENST00000554546 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
NUMB-212ENST00000554546 NBR1Q14596 966 aa16.19■□□□□ 0.18
NUMB-212ENST00000554546 NEFLP07196 543 aa16.08■□□□□ 0.17
NUMB-212ENST00000554546 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
NUMB-212ENST00000554546 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
NUMB-212ENST00000554546 TIMELESSQ9UNS1 1208 aa15.96■□□□□ 0.15
NUMB-212ENST00000554546 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
NUMB-212ENST00000554546 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
NUMB-212ENST00000554546 NOP58Q9Y2X3 529 aaKnown RBP15.91■□□□□ 0.14
NUMB-212ENST00000554546 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
NUMB-212ENST00000554546 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
NUMB-212ENST00000554546 GLIPR1L2Q4G1C9 344 aa15.87■□□□□ 0.13
NUMB-212ENST00000554546 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
NUMB-212ENST00000554546 BRPF3Q9ULD4 1205 aa15.74■□□□□ 0.11
NUMB-212ENST00000554546 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
NUMB-212ENST00000554546 TRIM52Q96A61 297 aa15.71■□□□□ 0.11
NUMB-212ENST00000554546 RSPH6AQ9H0K4 717 aa15.7■□□□□ 0.1
NUMB-212ENST00000554546 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
NUMB-212ENST00000554546 PDE4CQ08493 712 aa15.67■□□□□ 0.1
NUMB-212ENST00000554546 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
NUMB-212ENST00000554546 ZBTB47Q9UFB7 747 aaPredicted RBP15.62■□□□□ 0.09
NUMB-212ENST00000554546 RBM10P98175 930 aaKnown RBP15.61■□□□□ 0.09
NUMB-212ENST00000554546 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
NUMB-212ENST00000554546 NEFMP07197 916 aa15.6■□□□□ 0.09
NUMB-212ENST00000554546 FGD1P98174 961 aa15.6■□□□□ 0.09
NUMB-212ENST00000554546 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
NUMB-212ENST00000554546 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
NUMB-212ENST00000554546 AAMPQ13685 434 aa15.56■□□□□ 0.08
NUMB-212ENST00000554546 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
NUMB-212ENST00000554546 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
NUMB-212ENST00000554546 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
NUMB-212ENST00000554546 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
NUMB-212ENST00000554546 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
NUMB-212ENST00000554546 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
NUMB-212ENST00000554546 PPP4R2Q9NY27 417 aa15.48■□□□□ 0.07
NUMB-212ENST00000554546 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.07
NUMB-212ENST00000554546 USP35Q9P2H5 1018 aa15.45■□□□□ 0.06
NUMB-212ENST00000554546 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
NUMB-212ENST00000554546 GSE1Q14687 1217 aa15.42■□□□□ 0.06
NUMB-212ENST00000554546 FAM43AQ8N2R8 423 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms