Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC12.26□□□□□ -0.457e-7■■■■□ 20.3
RPS3P23396 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC11.74□□□□□ -0.537e-7■■■■□ 20.3
RPS3P23396 COPZ1-204ENST00000548281 554 ntTSL 411.45□□□□□ -0.587e-7■■■■□ 20.3
RPS3P23396 COPZ1-213ENST00000551962 578 ntTSL 511.1□□□□□ -0.637e-7■■■■□ 20.3
RPS3P23396 COPZ1-202ENST00000455864 880 ntTSL 2 BASIC11.1□□□□□ -0.637e-7■■■■□ 20.3
RPS3P23396 COPZ1-201ENST00000262061 1897 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.747e-7■■■■□ 20.3
RPS3P23396 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC10.26□□□□□ -0.777e-7■■■■□ 20.3
RPS3P23396 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.97e-7■■■■□ 20.3
RPS3P23396 COPZ1-209ENST00000550171 1026 ntTSL 29.08□□□□□ -0.967e-7■■■■□ 20.3
RPS3P23396 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.91□□□□□ -1.147e-7■■■■□ 20.3
RPS3P23396 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.01□□□□□ -1.457e-7■■■■□ 20.3
RPS3P23396 CCT2-212ENST00000551620 776 ntTSL 29.82□□□□□ -0.842e-7■■■■□ 20.3
RPS3P23396 DDB1-206ENST00000535283 1220 ntTSL 29.75□□□□□ -0.854e-8■■■■□ 20.3
RPS3P23396 UQCRH-203ENST00000486951 687 ntTSL 312.16□□□□□ -0.462e-8■■■■□ 20.3
RPS3P23396 SDHA-218ENST00000515752 1809 ntTSL 515.19■□□□□ 0.027e-7■■■■□ 20.3
RPS3P23396 NCSTN-208ENST00000438008 702 ntTSL 517.36■□□□□ 0.372e-7■■■■□ 20.3
RPS3P23396 NCSTN-211ENST00000467837 726 ntTSL 515.95■□□□□ 0.142e-7■■■■□ 20.3
RPS3P23396 TSPAN6-203ENST00000496771 1025 ntTSL 318.95■□□□□ 0.622e-6■■■■□ 20.3
RPS3P23396 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.76□□□□□ -1.332e-6■■■■□ 20.3
RPS3P23396 TSPAN6-202ENST00000494424 820 ntTSL 25.65□□□□□ -1.52e-6■■■■□ 20.3
RPS3P23396 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.25e-7■■■■□ 20.3
RPS3P23396 TAGLN2-205ENST00000478033 1051 ntTSL 212.06□□□□□ -0.485e-7■■■■□ 20.3
RPS3P23396 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.512e-18■■■■□ 20.3
RPS3P23396 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.312e-18■■■■□ 20.3
RPS3P23396 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.762e-18■■■■□ 20.3
RPS3P23396 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-18■■■■□ 20.3
RPS3P23396 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.922e-18■■■■□ 20.3
RPS3P23396 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.932e-18■■■■□ 20.3
RPS3P23396 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.7■□□□□ 0.582e-9■■■■□ 20.3
RPS3P23396 FCGR2A-214ENST00000536731 571 ntTSL 416.74■□□□□ 0.272e-6■■■■□ 20.3
RPS3P23396 FCGR2A-206ENST00000467654 914 ntTSL 214.47□□□□□ -0.092e-6■■■■□ 20.3
RPS3P23396 FCGR2A-208ENST00000473080 587 ntTSL 212.2□□□□□ -0.462e-6■■■■□ 20.3
RPS3P23396 FCGR2A-213ENST00000497474 557 ntTSL 48.06□□□□□ -1.122e-6■■■■□ 20.3
RPS3P23396 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.043e-6■■■■□ 20.3
RPS3P23396 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.71□□□□□ -0.373e-6■■■■□ 20.3
RPS3P23396 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.064e-7■■■■□ 20.3
RPS3P23396 ERMP1-204ENST00000475005 1219 ntTSL 521.03■□□□□ 0.967e-7■■■■□ 20.3
RPS3P23396 HLA-B-258ENST00000640615 240 ntBASIC8.67□□□□□ -1.025e-7■■■■□ 20.3
RPS3P23396 SERPINF1-205ENST00000571360 478 ntTSL 315.15■□□□□ 0.021e-22■■■■□ 20.3
RPS3P23396 DDX41-202ENST00000503078 2375 ntTSL 223.91■■□□□ 1.427e-10■■■■□ 20.3
RPS3P23396 GALNT1-206ENST00000591924 542 ntTSL 321.06■□□□□ 0.961e-7■■■■□ 20.3
RPS3P23396 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.751e-11■■■■□ 20.3
RPS3P23396 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.92■□□□□ 0.621e-7■■■■□ 20.3
RPS3P23396 STARD7-202ENST00000443962 742 ntTSL 518.72■□□□□ 0.591e-7■■■■□ 20.3
RPS3P23396 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.561e-7■■■■□ 20.3
RPS3P23396 CENPA-204ENST00000460030 745 ntTSL 1 (best)18.42■□□□□ 0.541e-7■■■■□ 20.3
RPS3P23396 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.521e-7■■■■□ 20.3
RPS3P23396 SHANK3-202ENST00000414786 7394 ntTSL 517.7■□□□□ 0.421e-7■■■■□ 20.3
RPS3P23396 FASN-202ENST00000578424 951 ntTSL 217.62■□□□□ 0.417e-20■■■■□ 20.3
RPS3P23396 FASN-204ENST00000580382 681 ntTSL 316.91■□□□□ 0.37e-20■■■■□ 20.3
RPS3P23396 DDX41-217ENST00000515562 1184 ntTSL 1 (best)16.85■□□□□ 0.297e-10■■■■□ 20.3
RPS3P23396 DDX41-201ENST00000330503 2137 ntTSL 1 (best)16.82■□□□□ 0.287e-10■■■■□ 20.3
RPS3P23396 CENPA-203ENST00000419525 950 ntTSL 515.85■□□□□ 0.131e-7■■■■□ 20.3
RPS3P23396 DDX41-205ENST00000505081 2949 ntTSL 215.62■□□□□ 0.097e-10■■■■□ 20.3
RPS3P23396 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.091e-7■■■■□ 20.3
RPS3P23396 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -01e-7■■■■□ 20.3
RPS3P23396 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.147e-10■■■■□ 20.3
RPS3P23396 CENPA-206ENST00000475662 1208 ntTSL 214.13□□□□□ -0.151e-7■■■■□ 20.3
RPS3P23396 GALNT1-202ENST00000586725 272 ntTSL 513.03□□□□□ -0.321e-7■■■■□ 20.3
RPS3P23396 LRRC47-202ENST00000462356 575 ntTSL 212.96□□□□□ -0.331e-7■■■■□ 20.3
RPS3P23396 DDX41-210ENST00000509576 819 ntTSL 312.71□□□□□ -0.377e-10■■■■□ 20.3
RPS3P23396 DDX41-206ENST00000506965 560 ntTSL 512.71□□□□□ -0.377e-10■■■■□ 20.3
RPS3P23396 PLOD1-206ENST00000470133 362 ntTSL 312.61□□□□□ -0.395e-12■■■■□ 20.3
RPS3P23396 CENPA-205ENST00000472719 689 ntTSL 312.59□□□□□ -0.391e-7■■■■□ 20.3
RPS3P23396 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.461e-11■■■■□ 20.3
RPS3P23396 DDX41-215ENST00000512431 904 ntTSL 511.75□□□□□ -0.537e-10■■■■□ 20.3
RPS3P23396 CUX1-210ENST00000497815 947 ntTSL 211.7□□□□□ -0.541e-7■■■■□ 20.3
RPS3P23396 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.557e-10■■■■□ 20.3
RPS3P23396 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC11.25□□□□□ -0.611e-7■■■■□ 20.3
RPS3P23396 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.86□□□□□ -0.671e-7■■■■□ 20.3
RPS3P23396 DDX41-219ENST00000629036 606 ntTSL 4 BASIC10.84□□□□□ -0.677e-10■■■■□ 20.3
RPS3P23396 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.58□□□□□ -0.721e-7■■■■□ 20.3
RPS3P23396 SF3A1-203ENST00000444440 777 ntTSL 510.49□□□□□ -0.737e-10■■■■□ 20.3
RPS3P23396 DDX41-218ENST00000625286 150 ntTSL 5 BASIC10.48□□□□□ -0.737e-10■■■■□ 20.3
RPS3P23396 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.42□□□□□ -0.741e-7■■■■□ 20.3
RPS3P23396 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.41□□□□□ -0.741e-7■■■■□ 20.3
RPS3P23396 TXNDC5-202ENST00000460138 2704 ntTSL 210.25□□□□□ -0.774e-11■■■■□ 20.3
RPS3P23396 DDX41-211ENST00000510171 569 ntTSL 39.86□□□□□ -0.837e-10■■■■□ 20.3
RPS3P23396 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.931e-7■■■■□ 20.3
RPS3P23396 NNT-209ENST00000513390 664 ntTSL 29.22□□□□□ -0.937e-10■■■■□ 20.3
RPS3P23396 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.18□□□□□ -0.941e-7■■■■□ 20.3
RPS3P23396 NNT-208ENST00000512996 4288 ntTSL 5 BASIC8.97□□□□□ -0.977e-10■■■■□ 20.3
RPS3P23396 SF3A1-210ENST00000498259 875 ntTSL 28.41□□□□□ -1.067e-10■■■■□ 20.3
RPS3P23396 SF3A1-208ENST00000485618 593 ntTSL 28.13□□□□□ -1.117e-10■■■■□ 20.3
RPS3P23396 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.237e-10■■■■□ 20.3
RPS3P23396 TLN1-208ENST00000495712 370 ntTSL 26.84□□□□□ -1.315e-12■■■■□ 20.3
RPS3P23396 CUX1-220ENST00000607092 559 ntTSL 35.97□□□□□ -1.451e-7■■■■□ 20.3
RPS3P23396 NUP98-215ENST00000529063 544 ntTSL 35.65□□□□□ -1.51e-7■■■■□ 20.3
RPS3P23396 SHMT2-210ENST00000553950 584 ntTSL 214.39□□□□□ -0.118e-7■■■■□ 20.3
RPS3P23396 TUSC2-205ENST00000462137 834 ntTSL 321.62■■□□□ 1.052e-6■■■■□ 20.3
RPS3P23396 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.456e-12■■■■□ 20.3
RPS3P23396 ALDH3A2-223ENST00000584332 573 ntTSL 519.89■□□□□ 0.773e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.89■□□□□ 0.773e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-222ENST00000582991 2152 ntTSL 517.04■□□□□ 0.323e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.9■□□□□ 0.33e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-220ENST00000580550 540 ntTSL 415.47■□□□□ 0.073e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-205ENST00000467473 651 ntTSL 215.33■□□□□ 0.043e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-216ENST00000578614 527 ntTSL 415.2■□□□□ 0.023e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.023e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.88□□□□□ -0.193e-7■■■■□ 20.3
Retrieved 100 of 24,271 protein–RNA pairs in 213.9 ms