RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
DDX41-211ENST00000510171 ABCC9O60706 1549 aa23.73■■□□□ 1.39
DDX41-211ENST00000510171 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
DDX41-211ENST00000510171 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
DDX41-211ENST00000510171 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
DDX41-211ENST00000510171 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
DDX41-211ENST00000510171 NACADO15069 1562 aa22.28■■□□□ 1.16
DDX41-211ENST00000510171 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
DDX41-211ENST00000510171 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
DDX41-211ENST00000510171 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
DDX41-211ENST00000510171 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
DDX41-211ENST00000510171 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
DDX41-211ENST00000510171 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
DDX41-211ENST00000510171 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
DDX41-211ENST00000510171 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
DDX41-211ENST00000510171 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
DDX41-211ENST00000510171 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
DDX41-211ENST00000510171 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
DDX41-211ENST00000510171 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
DDX41-211ENST00000510171 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
DDX41-211ENST00000510171 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
DDX41-211ENST00000510171 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
DDX41-211ENST00000510171 CUX2O14529 1486 aa20.5■□□□□ 0.87
DDX41-211ENST00000510171 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
DDX41-211ENST00000510171 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
DDX41-211ENST00000510171 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
DDX41-211ENST00000510171 NESP48681 1621 aa20.31■□□□□ 0.84
DDX41-211ENST00000510171 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
DDX41-211ENST00000510171 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
DDX41-211ENST00000510171 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
DDX41-211ENST00000510171 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
DDX41-211ENST00000510171 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
DDX41-211ENST00000510171 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
DDX41-211ENST00000510171 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
DDX41-211ENST00000510171 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
DDX41-211ENST00000510171 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
DDX41-211ENST00000510171 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
DDX41-211ENST00000510171 WIZO95785 1651 aa19.82■□□□□ 0.76
DDX41-211ENST00000510171 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
DDX41-211ENST00000510171 WDR62O43379 1518 aa19.79■□□□□ 0.76
DDX41-211ENST00000510171 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
DDX41-211ENST00000510171 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
DDX41-211ENST00000510171 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
DDX41-211ENST00000510171 CFTRP13569 1480 aa19.72■□□□□ 0.75
DDX41-211ENST00000510171 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
DDX41-211ENST00000510171 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
DDX41-211ENST00000510171 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
DDX41-211ENST00000510171 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
DDX41-211ENST00000510171 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
DDX41-211ENST00000510171 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
DDX41-211ENST00000510171 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
DDX41-211ENST00000510171 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
DDX41-211ENST00000510171 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
DDX41-211ENST00000510171 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
DDX41-211ENST00000510171 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
DDX41-211ENST00000510171 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
DDX41-211ENST00000510171 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
DDX41-211ENST00000510171 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.674e-10■■■■□ 23.3
DDX41-211ENST00000510171 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
DDX41-211ENST00000510171 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
DDX41-211ENST00000510171 FBLN2P98095 1184 aa19.2■□□□□ 0.66
DDX41-211ENST00000510171 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
DDX41-211ENST00000510171 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
DDX41-211ENST00000510171 SOGA1O94964 1423 aa19.11■□□□□ 0.65
DDX41-211ENST00000510171 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
DDX41-211ENST00000510171 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
DDX41-211ENST00000510171 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
DDX41-211ENST00000510171 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
DDX41-211ENST00000510171 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
DDX41-211ENST00000510171 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
DDX41-211ENST00000510171 CHD1O14646 1710 aa18.99■□□□□ 0.63
DDX41-211ENST00000510171 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
DDX41-211ENST00000510171 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
DDX41-211ENST00000510171 CUX1P39880 1505 aa18.93■□□□□ 0.62
DDX41-211ENST00000510171 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
DDX41-211ENST00000510171 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
DDX41-211ENST00000510171 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
DDX41-211ENST00000510171 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
DDX41-211ENST00000510171 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
DDX41-211ENST00000510171 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
DDX41-211ENST00000510171 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
DDX41-211ENST00000510171 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
DDX41-211ENST00000510171 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
DDX41-211ENST00000510171 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
DDX41-211ENST00000510171 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
DDX41-211ENST00000510171 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
DDX41-211ENST00000510171 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
DDX41-211ENST00000510171 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
DDX41-211ENST00000510171 NUP160Q12769 1436 aa18.61■□□□□ 0.57
DDX41-211ENST00000510171 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
DDX41-211ENST00000510171 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
DDX41-211ENST00000510171 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
DDX41-211ENST00000510171 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
DDX41-211ENST00000510171 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
DDX41-211ENST00000510171 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
DDX41-211ENST00000510171 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
DDX41-211ENST00000510171 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
DDX41-211ENST00000510171 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
DDX41-211ENST00000510171 SHROOM2Q13796 1616 aa18.44■□□□□ 0.54
DDX41-211ENST00000510171 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms