RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-208ENST00000596304 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
UBA52-208ENST00000596304 ABCC9O60706 1549 aa31.14■■■□□ 2.57
UBA52-208ENST00000596304 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
UBA52-208ENST00000596304 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
UBA52-208ENST00000596304 NACADO15069 1562 aa29.38■■■□□ 2.29
UBA52-208ENST00000596304 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
UBA52-208ENST00000596304 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
UBA52-208ENST00000596304 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
UBA52-208ENST00000596304 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
UBA52-208ENST00000596304 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
UBA52-208ENST00000596304 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
UBA52-208ENST00000596304 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
UBA52-208ENST00000596304 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
UBA52-208ENST00000596304 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
UBA52-208ENST00000596304 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
UBA52-208ENST00000596304 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
UBA52-208ENST00000596304 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
UBA52-208ENST00000596304 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
UBA52-208ENST00000596304 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
UBA52-208ENST00000596304 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
UBA52-208ENST00000596304 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
UBA52-208ENST00000596304 SMARCA2P51531 1590 aa26.96■■□□□ 1.91
UBA52-208ENST00000596304 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
UBA52-208ENST00000596304 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
UBA52-208ENST00000596304 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
UBA52-208ENST00000596304 CUX2O14529 1486 aa26.81■■□□□ 1.88
UBA52-208ENST00000596304 DNAJC5Q9H3Z4 198 aa26.81■■□□□ 1.88
UBA52-208ENST00000596304 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
UBA52-208ENST00000596304 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
UBA52-208ENST00000596304 NESP48681 1621 aa26.75■■□□□ 1.87
UBA52-208ENST00000596304 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
UBA52-208ENST00000596304 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
UBA52-208ENST00000596304 THOC2Q8NI27 1593 aaKnown RBP26.51■■□□□ 1.83
UBA52-208ENST00000596304 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
UBA52-208ENST00000596304 WIZO95785 1651 aa26.41■■□□□ 1.82
UBA52-208ENST00000596304 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
UBA52-208ENST00000596304 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
UBA52-208ENST00000596304 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.78
UBA52-208ENST00000596304 WDR62O43379 1518 aa26.09■■□□□ 1.77
UBA52-208ENST00000596304 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
UBA52-208ENST00000596304 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
UBA52-208ENST00000596304 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
UBA52-208ENST00000596304 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
UBA52-208ENST00000596304 CFTRP13569 1480 aa25.98■■□□□ 1.75
UBA52-208ENST00000596304 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
UBA52-208ENST00000596304 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
UBA52-208ENST00000596304 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
UBA52-208ENST00000596304 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
UBA52-208ENST00000596304 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
UBA52-208ENST00000596304 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
UBA52-208ENST00000596304 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
UBA52-208ENST00000596304 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
UBA52-208ENST00000596304 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
UBA52-208ENST00000596304 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
UBA52-208ENST00000596304 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.65
UBA52-208ENST00000596304 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
UBA52-208ENST00000596304 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
UBA52-208ENST00000596304 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
UBA52-208ENST00000596304 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
UBA52-208ENST00000596304 CHD1O14646 1710 aa25.26■■□□□ 1.63
UBA52-208ENST00000596304 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.634e-8■■■■■ 30.6
UBA52-208ENST00000596304 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
UBA52-208ENST00000596304 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
UBA52-208ENST00000596304 RAD54L2Q9Y4B4 1467 aa25.17■■□□□ 1.62
UBA52-208ENST00000596304 SOGA1O94964 1423 aa25.11■■□□□ 1.61
UBA52-208ENST00000596304 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
UBA52-208ENST00000596304 CUX1P39880 1505 aa25.07■■□□□ 1.6
UBA52-208ENST00000596304 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
UBA52-208ENST00000596304 FBLN2P98095 1184 aa25.06■■□□□ 1.6
UBA52-208ENST00000596304 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
UBA52-208ENST00000596304 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
UBA52-208ENST00000596304 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
UBA52-208ENST00000596304 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
UBA52-208ENST00000596304 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
UBA52-208ENST00000596304 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
UBA52-208ENST00000596304 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
UBA52-208ENST00000596304 CLASP1Q7Z460 1538 aa24.9■■□□□ 1.58
UBA52-208ENST00000596304 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
UBA52-208ENST00000596304 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
UBA52-208ENST00000596304 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
UBA52-208ENST00000596304 SYNJ2O15056 1496 aa24.83■■□□□ 1.56
UBA52-208ENST00000596304 ABCA5Q8WWZ7 1642 aa24.81■■□□□ 1.56
UBA52-208ENST00000596304 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
UBA52-208ENST00000596304 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
UBA52-208ENST00000596304 TRHP20396 242 aaPredicted RBP24.7■■□□□ 1.54
UBA52-208ENST00000596304 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
UBA52-208ENST00000596304 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
UBA52-208ENST00000596304 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.542e-16■□□□□ 8
UBA52-208ENST00000596304 ADAMTS12P58397 1594 aa24.62■■□□□ 1.53
UBA52-208ENST00000596304 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
UBA52-208ENST00000596304 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
UBA52-208ENST00000596304 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
UBA52-208ENST00000596304 NUP160Q12769 1436 aa24.51■■□□□ 1.51
UBA52-208ENST00000596304 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
UBA52-208ENST00000596304 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
UBA52-208ENST00000596304 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
UBA52-208ENST00000596304 RUSC2Q8N2Y8 1516 aa24.27■■□□□ 1.48
UBA52-208ENST00000596304 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
UBA52-208ENST00000596304 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
UBA52-208ENST00000596304 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms