RNA–Protein interactions for RNA: ENST00000472719.5

CENPA-205, Transcript of centromere protein A, humanhuman

TSL 3

Gene CENPA, Length 689 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-205ENST00000472719 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
CENPA-205ENST00000472719 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
CENPA-205ENST00000472719 ABCC9O60706 1549 aa30.59■■■□□ 2.49
CENPA-205ENST00000472719 RB1CC1Q8TDY2 1594 aa29.16■■■□□ 2.26
CENPA-205ENST00000472719 NACADO15069 1562 aa28.92■■■□□ 2.22
CENPA-205ENST00000472719 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
CENPA-205ENST00000472719 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
CENPA-205ENST00000472719 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
CENPA-205ENST00000472719 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
CENPA-205ENST00000472719 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
CENPA-205ENST00000472719 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
CENPA-205ENST00000472719 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
CENPA-205ENST00000472719 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
CENPA-205ENST00000472719 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
CENPA-205ENST00000472719 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
CENPA-205ENST00000472719 SCRIBQ14160 1630 aa27.72■■■□□ 2.03
CENPA-205ENST00000472719 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
CENPA-205ENST00000472719 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
CENPA-205ENST00000472719 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
CENPA-205ENST00000472719 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
CENPA-205ENST00000472719 CUX2O14529 1486 aa26.57■■□□□ 1.84
CENPA-205ENST00000472719 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
CENPA-205ENST00000472719 SMARCA4P51532 1647 aa26.51■■□□□ 1.83
CENPA-205ENST00000472719 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
CENPA-205ENST00000472719 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
CENPA-205ENST00000472719 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
CENPA-205ENST00000472719 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.8
CENPA-205ENST00000472719 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
CENPA-205ENST00000472719 NESP48681 1621 aa26.25■■□□□ 1.79
CENPA-205ENST00000472719 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
CENPA-205ENST00000472719 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
CENPA-205ENST00000472719 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
CENPA-205ENST00000472719 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
CENPA-205ENST00000472719 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
CENPA-205ENST00000472719 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
CENPA-205ENST00000472719 WIZO95785 1651 aa25.78■■□□□ 1.72
CENPA-205ENST00000472719 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
CENPA-205ENST00000472719 WDR62O43379 1518 aa25.73■■□□□ 1.71
CENPA-205ENST00000472719 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CENPA-205ENST00000472719 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
CENPA-205ENST00000472719 CFTRP13569 1480 aa25.5■■□□□ 1.67
CENPA-205ENST00000472719 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
CENPA-205ENST00000472719 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
CENPA-205ENST00000472719 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
CENPA-205ENST00000472719 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
CENPA-205ENST00000472719 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
CENPA-205ENST00000472719 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
CENPA-205ENST00000472719 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
CENPA-205ENST00000472719 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
CENPA-205ENST00000472719 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
CENPA-205ENST00000472719 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
CENPA-205ENST00000472719 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
CENPA-205ENST00000472719 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
CENPA-205ENST00000472719 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
CENPA-205ENST00000472719 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
CENPA-205ENST00000472719 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
CENPA-205ENST00000472719 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CENPA-205ENST00000472719 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
CENPA-205ENST00000472719 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
CENPA-205ENST00000472719 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
CENPA-205ENST00000472719 CHD1O14646 1710 aa24.85■■□□□ 1.57
CENPA-205ENST00000472719 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
CENPA-205ENST00000472719 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.551e-6■■■■□ 22.7
CENPA-205ENST00000472719 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
CENPA-205ENST00000472719 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
CENPA-205ENST00000472719 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
CENPA-205ENST00000472719 SOGA1O94964 1423 aa24.56■■□□□ 1.52
CENPA-205ENST00000472719 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
CENPA-205ENST00000472719 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
CENPA-205ENST00000472719 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
CENPA-205ENST00000472719 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
CENPA-205ENST00000472719 CUX1P39880 1505 aa24.51■■□□□ 1.51
CENPA-205ENST00000472719 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
CENPA-205ENST00000472719 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
CENPA-205ENST00000472719 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
CENPA-205ENST00000472719 FBLN2P98095 1184 aa24.44■■□□□ 1.5
CENPA-205ENST00000472719 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
CENPA-205ENST00000472719 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
CENPA-205ENST00000472719 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
CENPA-205ENST00000472719 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
CENPA-205ENST00000472719 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
CENPA-205ENST00000472719 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
CENPA-205ENST00000472719 GAPVD1Q14C86 1478 aa24.29■■□□□ 1.48
CENPA-205ENST00000472719 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
CENPA-205ENST00000472719 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
CENPA-205ENST00000472719 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
CENPA-205ENST00000472719 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
CENPA-205ENST00000472719 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
CENPA-205ENST00000472719 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
CENPA-205ENST00000472719 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
CENPA-205ENST00000472719 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
CENPA-205ENST00000472719 NUP160Q12769 1436 aa24.08■■□□□ 1.44
CENPA-205ENST00000472719 WRNQ14191 1432 aaPredicted RBP eCLIP24.07■■□□□ 1.44
CENPA-205ENST00000472719 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
CENPA-205ENST00000472719 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
CENPA-205ENST00000472719 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
CENPA-205ENST00000472719 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
CENPA-205ENST00000472719 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
CENPA-205ENST00000472719 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
CENPA-205ENST00000472719 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1167.6 ms