RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 NISCHQ9Y2I1 1504 aa45.35■■■■■ 4.85
CENPA-204ENST00000460030 CCDC180Q9P1Z9 1646 aa40.46■■■■■ 4.07
CENPA-204ENST00000460030 ABCC9O60706 1549 aa40.21■■■■■ 4.03
CENPA-204ENST00000460030 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
CENPA-204ENST00000460030 DCAF8L2P0C7V8 631 aa38.18■■■■□ 3.7
CENPA-204ENST00000460030 NACADO15069 1562 aa38.16■■■■□ 3.7
CENPA-204ENST00000460030 MYO15BQ96JP2 1530 aa37.73■■■■□ 3.63
CENPA-204ENST00000460030 ZCCHC6Q5VYS8 1495 aaKnown RBP37.68■■■■□ 3.62
CENPA-204ENST00000460030 PABPN1Q86U42 306 aaKnown RBP eCLIP37.52■■■■□ 3.6
CENPA-204ENST00000460030 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
CENPA-204ENST00000460030 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
CENPA-204ENST00000460030 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
CENPA-204ENST00000460030 BICRAQ9NZM4 1560 aa37.27■■■■□ 3.56
CENPA-204ENST00000460030 SCRIBQ14160 1630 aa37.02■■■■□ 3.52
CENPA-204ENST00000460030 SHROOM4Q9ULL8 1493 aa36.7■■■■□ 3.47
CENPA-204ENST00000460030 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.4
CENPA-204ENST00000460030 CC2D2AQ9P2K1 1620 aa36.29■■■■□ 3.4
CENPA-204ENST00000460030 CECR2Q9BXF3 1484 aa36.14■■■■□ 3.38
CENPA-204ENST00000460030 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
CENPA-204ENST00000460030 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
CENPA-204ENST00000460030 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
CENPA-204ENST00000460030 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
CENPA-204ENST00000460030 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
CENPA-204ENST00000460030 HMGXB3Q12766 1538 aa35.03■■■■□ 3.2
CENPA-204ENST00000460030 MROH2BQ7Z745 1585 aa35■■■■□ 3.19
CENPA-204ENST00000460030 BAZ1BQ9UIG0 1483 aaKnown RBP34.92■■■■□ 3.18
CENPA-204ENST00000460030 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
CENPA-204ENST00000460030 NESP48681 1621 aa34.66■■■■□ 3.14
CENPA-204ENST00000460030 ERCC6Q03468 1493 aa34.66■■■■□ 3.14
CENPA-204ENST00000460030 WIZO95785 1651 aa34.59■■■■□ 3.13
CENPA-204ENST00000460030 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
CENPA-204ENST00000460030 CUX2O14529 1486 aa34.4■■■■□ 3.1
CENPA-204ENST00000460030 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
CENPA-204ENST00000460030 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
CENPA-204ENST00000460030 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
CENPA-204ENST00000460030 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
CENPA-204ENST00000460030 PDS5BQ9NTI5 1447 aa34.18■■■■□ 3.06
CENPA-204ENST00000460030 TOP2AP11388 1531 aaKnown RBP34.15■■■■□ 3.06
CENPA-204ENST00000460030 DNAJC5Q9H3Z4 198 aa33.94■■■■□ 3.02
CENPA-204ENST00000460030 CFTRP13569 1480 aa33.91■■■■□ 3.02
CENPA-204ENST00000460030 MRC2Q9UBG0 1479 aa33.9■■■■□ 3.02
CENPA-204ENST00000460030 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
CENPA-204ENST00000460030 CEP164Q9UPV0 1460 aa33.85■■■■□ 3.01
CENPA-204ENST00000460030 WDR62O43379 1518 aa33.79■■■■□ 3
CENPA-204ENST00000460030 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
CENPA-204ENST00000460030 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
CENPA-204ENST00000460030 URB2Q14146 1524 aaKnown RBP33.57■■■□□ 2.96
CENPA-204ENST00000460030 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
CENPA-204ENST00000460030 TOPBP1Q92547 1522 aa33.26■■■□□ 2.91
CENPA-204ENST00000460030 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
CENPA-204ENST00000460030 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
CENPA-204ENST00000460030 ABCC8Q09428 1581 aa33.12■■■□□ 2.89
CENPA-204ENST00000460030 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
CENPA-204ENST00000460030 POLA1P09884 1462 aaPredicted RBP32.95■■■□□ 2.87
CENPA-204ENST00000460030 EIF4G3O43432 1585 aaKnown RBP32.92■■■□□ 2.86
CENPA-204ENST00000460030 TARBP1Q13395 1621 aaKnown RBP32.91■■■□□ 2.86
CENPA-204ENST00000460030 OSCARQ8IYS5 282 aa32.9■■■□□ 2.86
CENPA-204ENST00000460030 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
CENPA-204ENST00000460030 CUX1P39880 1505 aa32.85■■■□□ 2.85
CENPA-204ENST00000460030 AQRO60306 1485 aaKnown RBP eCLIP32.85■■■□□ 2.851e-6■■■■□ 22.7
CENPA-204ENST00000460030 FGD5Q6ZNL6 1462 aa32.81■■■□□ 2.84
CENPA-204ENST00000460030 SOGA1O94964 1423 aa32.79■■■□□ 2.84
CENPA-204ENST00000460030 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
CENPA-204ENST00000460030 TRIM41Q8WV44 630 aa32.72■■■□□ 2.83
CENPA-204ENST00000460030 CHD1O14646 1710 aa32.58■■■□□ 2.81
CENPA-204ENST00000460030 FBLN2P98095 1184 aa32.57■■■□□ 2.8
CENPA-204ENST00000460030 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
CENPA-204ENST00000460030 WDR97A6NE52 1622 aa32.53■■■□□ 2.8
CENPA-204ENST00000460030 RIMBP3CA6NJZ7 1639 aa32.48■■■□□ 2.79
CENPA-204ENST00000460030 RIMBP3BA6NNM3 1639 aa32.48■■■□□ 2.79
CENPA-204ENST00000460030 RIMBP3Q9UFD9 1639 aa32.48■■■□□ 2.79
CENPA-204ENST00000460030 GRIN2BQ13224 1484 aa32.45■■■□□ 2.79
CENPA-204ENST00000460030 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
CENPA-204ENST00000460030 ARHGEF11O15085 1522 aa32.42■■■□□ 2.78
CENPA-204ENST00000460030 ABCA10Q8WWZ4 1543 aa32.42■■■□□ 2.78
CENPA-204ENST00000460030 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
CENPA-204ENST00000460030 GAPVD1Q14C86 1478 aa32.4■■■□□ 2.78
CENPA-204ENST00000460030 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
CENPA-204ENST00000460030 TOP2BQ02880 1626 aa32.39■■■□□ 2.78
CENPA-204ENST00000460030 BIVM-ERCC5R4GMW8 1640 aa32.38■■■□□ 2.77
CENPA-204ENST00000460030 PBRM1Q86U86 1689 aa32.36■■■□□ 2.77
CENPA-204ENST00000460030 ABCA5Q8WWZ7 1642 aa32.35■■■□□ 2.77
CENPA-204ENST00000460030 CHMP7Q8WUX9 453 aaPredicted RBP32.34■■■□□ 2.77
CENPA-204ENST00000460030 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
CENPA-204ENST00000460030 CLASP1Q7Z460 1538 aa32.22■■■□□ 2.75
CENPA-204ENST00000460030 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
CENPA-204ENST00000460030 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
CENPA-204ENST00000460030 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
CENPA-204ENST00000460030 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
CENPA-204ENST00000460030 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
CENPA-204ENST00000460030 FHAD1B1AJZ9 1412 aa32■■■□□ 2.71
CENPA-204ENST00000460030 CEP170Q5SW79 1584 aa31.94■■■□□ 2.7
CENPA-204ENST00000460030 NUP160Q12769 1436 aa31.92■■■□□ 2.7
CENPA-204ENST00000460030 ERCC6L2Q5T890 1561 aa31.81■■■□□ 2.68
CENPA-204ENST00000460030 KIF27Q86VH2 1401 aa31.77■■■□□ 2.68
CENPA-204ENST00000460030 IGF1RP08069 1367 aa31.72■■■□□ 2.67
CENPA-204ENST00000460030 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
CENPA-204ENST00000460030 TRHP20396 242 aaPredicted RBP31.68■■■□□ 2.66
CENPA-204ENST00000460030 CHIC1Q5VXU3 224 aa31.68■■■□□ 2.66
CENPA-204ENST00000460030 RUSC2Q8N2Y8 1516 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms