RNA–Protein interactions for RNA: ENST00000470133.1

PLOD1-206, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 3

Gene PLOD1, Length 362 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-206ENST00000470133 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
PLOD1-206ENST00000470133 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
PLOD1-206ENST00000470133 ABCC9O60706 1549 aa27.21■■□□□ 1.95
PLOD1-206ENST00000470133 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
PLOD1-206ENST00000470133 NACADO15069 1562 aa26.19■■□□□ 1.78
PLOD1-206ENST00000470133 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
PLOD1-206ENST00000470133 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
PLOD1-206ENST00000470133 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
PLOD1-206ENST00000470133 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
PLOD1-206ENST00000470133 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
PLOD1-206ENST00000470133 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
PLOD1-206ENST00000470133 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
PLOD1-206ENST00000470133 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
PLOD1-206ENST00000470133 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
PLOD1-206ENST00000470133 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
PLOD1-206ENST00000470133 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
PLOD1-206ENST00000470133 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
PLOD1-206ENST00000470133 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
PLOD1-206ENST00000470133 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
PLOD1-206ENST00000470133 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
PLOD1-206ENST00000470133 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
PLOD1-206ENST00000470133 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
PLOD1-206ENST00000470133 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
PLOD1-206ENST00000470133 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
PLOD1-206ENST00000470133 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.44
PLOD1-206ENST00000470133 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
PLOD1-206ENST00000470133 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
PLOD1-206ENST00000470133 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
PLOD1-206ENST00000470133 WIZO95785 1651 aa23.82■■□□□ 1.4
PLOD1-206ENST00000470133 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
PLOD1-206ENST00000470133 NESP48681 1621 aa23.54■■□□□ 1.36
PLOD1-206ENST00000470133 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
PLOD1-206ENST00000470133 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
PLOD1-206ENST00000470133 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
PLOD1-206ENST00000470133 PDS5BQ9NTI5 1447 aa23.38■■□□□ 1.33
PLOD1-206ENST00000470133 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
PLOD1-206ENST00000470133 CFTRP13569 1480 aa23.34■■□□□ 1.33
PLOD1-206ENST00000470133 CUX2O14529 1486 aa23.25■■□□□ 1.31
PLOD1-206ENST00000470133 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
PLOD1-206ENST00000470133 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
PLOD1-206ENST00000470133 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
PLOD1-206ENST00000470133 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
PLOD1-206ENST00000470133 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
PLOD1-206ENST00000470133 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
PLOD1-206ENST00000470133 WDR62O43379 1518 aa23.05■■□□□ 1.28
PLOD1-206ENST00000470133 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
PLOD1-206ENST00000470133 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
PLOD1-206ENST00000470133 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
PLOD1-206ENST00000470133 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
PLOD1-206ENST00000470133 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
PLOD1-206ENST00000470133 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
PLOD1-206ENST00000470133 CUX1P39880 1505 aa22.63■■□□□ 1.21
PLOD1-206ENST00000470133 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
PLOD1-206ENST00000470133 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
PLOD1-206ENST00000470133 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
PLOD1-206ENST00000470133 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
PLOD1-206ENST00000470133 SOGA1O94964 1423 aa22.53■■□□□ 1.2
PLOD1-206ENST00000470133 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
PLOD1-206ENST00000470133 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
PLOD1-206ENST00000470133 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
PLOD1-206ENST00000470133 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
PLOD1-206ENST00000470133 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
PLOD1-206ENST00000470133 AQRO60306 1485 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■□□ 18.8
PLOD1-206ENST00000470133 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
PLOD1-206ENST00000470133 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
PLOD1-206ENST00000470133 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
PLOD1-206ENST00000470133 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
PLOD1-206ENST00000470133 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
PLOD1-206ENST00000470133 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
PLOD1-206ENST00000470133 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
PLOD1-206ENST00000470133 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
PLOD1-206ENST00000470133 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
PLOD1-206ENST00000470133 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
PLOD1-206ENST00000470133 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
PLOD1-206ENST00000470133 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
PLOD1-206ENST00000470133 FBLN2P98095 1184 aa22.15■■□□□ 1.14
PLOD1-206ENST00000470133 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
PLOD1-206ENST00000470133 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
PLOD1-206ENST00000470133 CHD1O14646 1710 aa22.11■■□□□ 1.13
PLOD1-206ENST00000470133 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
PLOD1-206ENST00000470133 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
PLOD1-206ENST00000470133 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
PLOD1-206ENST00000470133 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
PLOD1-206ENST00000470133 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
PLOD1-206ENST00000470133 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
PLOD1-206ENST00000470133 IGF1RP08069 1367 aa21.96■■□□□ 1.11
PLOD1-206ENST00000470133 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
PLOD1-206ENST00000470133 NUP160Q12769 1436 aa21.91■■□□□ 1.1
PLOD1-206ENST00000470133 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
PLOD1-206ENST00000470133 CUL7Q14999 1698 aa21.86■■□□□ 1.09
PLOD1-206ENST00000470133 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
PLOD1-206ENST00000470133 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
PLOD1-206ENST00000470133 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
PLOD1-206ENST00000470133 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
PLOD1-206ENST00000470133 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
PLOD1-206ENST00000470133 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
PLOD1-206ENST00000470133 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
PLOD1-206ENST00000470133 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
PLOD1-206ENST00000470133 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
PLOD1-206ENST00000470133 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms