RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 NISCHQ9Y2I1 1504 aa43.5■■■■■ 4.55
NCSTN-208ENST00000438008 CCDC180Q9P1Z9 1646 aa38.68■■■■□ 3.78
NCSTN-208ENST00000438008 ABCC9O60706 1549 aa37.97■■■■□ 3.67
NCSTN-208ENST00000438008 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
NCSTN-208ENST00000438008 NACADO15069 1562 aa36.44■■■■□ 3.42
NCSTN-208ENST00000438008 DCAF8L2P0C7V8 631 aa36.35■■■■□ 3.41
NCSTN-208ENST00000438008 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
NCSTN-208ENST00000438008 ZCCHC6Q5VYS8 1495 aaKnown RBP36.21■■■■□ 3.39
NCSTN-208ENST00000438008 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
NCSTN-208ENST00000438008 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
NCSTN-208ENST00000438008 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.27
NCSTN-208ENST00000438008 BICRAQ9NZM4 1560 aa35.39■■■■□ 3.26
NCSTN-208ENST00000438008 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
NCSTN-208ENST00000438008 SHROOM4Q9ULL8 1493 aa35.07■■■■□ 3.2
NCSTN-208ENST00000438008 DNAJC5BQ9UF47 199 aa35.02■■■■□ 3.2
NCSTN-208ENST00000438008 EIF4G1Q04637 1599 aaKnown RBP34.46■■■■□ 3.11
NCSTN-208ENST00000438008 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
NCSTN-208ENST00000438008 CECR2Q9BXF3 1484 aa34.15■■■■□ 3.06
NCSTN-208ENST00000438008 SMARCA4P51532 1647 aa33.74■■■□□ 2.99
NCSTN-208ENST00000438008 BAZ1AQ9NRL2 1556 aaPredicted RBP33.71■■■□□ 2.99
NCSTN-208ENST00000438008 NCAPD3P42695 1498 aa33.67■■■□□ 2.98
NCSTN-208ENST00000438008 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
NCSTN-208ENST00000438008 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
NCSTN-208ENST00000438008 MROH2BQ7Z745 1585 aa33.5■■■□□ 2.95
NCSTN-208ENST00000438008 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
NCSTN-208ENST00000438008 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
NCSTN-208ENST00000438008 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
NCSTN-208ENST00000438008 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
NCSTN-208ENST00000438008 WIZO95785 1651 aa33.09■■■□□ 2.89
NCSTN-208ENST00000438008 NESP48681 1621 aa32.82■■■□□ 2.84
NCSTN-208ENST00000438008 TOP2AP11388 1531 aaKnown RBP32.77■■■□□ 2.84
NCSTN-208ENST00000438008 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
NCSTN-208ENST00000438008 ERCC6Q03468 1493 aa32.73■■■□□ 2.83
NCSTN-208ENST00000438008 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
NCSTN-208ENST00000438008 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
NCSTN-208ENST00000438008 CUX2O14529 1486 aa32.48■■■□□ 2.79
NCSTN-208ENST00000438008 CFTRP13569 1480 aa32.44■■■□□ 2.78
NCSTN-208ENST00000438008 CCDC88BA6NC98 1476 aa32.41■■■□□ 2.78
NCSTN-208ENST00000438008 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
NCSTN-208ENST00000438008 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
NCSTN-208ENST00000438008 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
NCSTN-208ENST00000438008 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
NCSTN-208ENST00000438008 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
NCSTN-208ENST00000438008 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
NCSTN-208ENST00000438008 WDR62O43379 1518 aa32.1■■■□□ 2.73
NCSTN-208ENST00000438008 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
NCSTN-208ENST00000438008 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
NCSTN-208ENST00000438008 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
NCSTN-208ENST00000438008 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
NCSTN-208ENST00000438008 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
NCSTN-208ENST00000438008 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
NCSTN-208ENST00000438008 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
NCSTN-208ENST00000438008 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
NCSTN-208ENST00000438008 CUX1P39880 1505 aa31.44■■■□□ 2.62
NCSTN-208ENST00000438008 ZNF608Q9ULD9 1512 aaPredicted RBP31.41■■■□□ 2.62
NCSTN-208ENST00000438008 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
NCSTN-208ENST00000438008 FGD5Q6ZNL6 1462 aa31.34■■■□□ 2.61
NCSTN-208ENST00000438008 SOGA1O94964 1423 aa31.33■■■□□ 2.61
NCSTN-208ENST00000438008 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
NCSTN-208ENST00000438008 EIF4G3O43432 1585 aaKnown RBP31.25■■■□□ 2.59
NCSTN-208ENST00000438008 AQRO60306 1485 aaKnown RBP eCLIP31.23■■■□□ 2.598e-6■■■■□ 23.2
NCSTN-208ENST00000438008 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
NCSTN-208ENST00000438008 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
NCSTN-208ENST00000438008 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
NCSTN-208ENST00000438008 OSCARQ8IYS5 282 aa31.14■■■□□ 2.58
NCSTN-208ENST00000438008 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
NCSTN-208ENST00000438008 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
NCSTN-208ENST00000438008 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
NCSTN-208ENST00000438008 ABCA10Q8WWZ4 1543 aa31.06■■■□□ 2.56
NCSTN-208ENST00000438008 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
NCSTN-208ENST00000438008 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
NCSTN-208ENST00000438008 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
NCSTN-208ENST00000438008 MAGI1Q96QZ7 1491 aaPredicted RBP30.91■■■□□ 2.54
NCSTN-208ENST00000438008 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
NCSTN-208ENST00000438008 FBLN2P98095 1184 aa30.86■■■□□ 2.53
NCSTN-208ENST00000438008 CHD1O14646 1710 aa30.84■■■□□ 2.53
NCSTN-208ENST00000438008 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
NCSTN-208ENST00000438008 CHMP7Q8WUX9 453 aaPredicted RBP30.8■■■□□ 2.52
NCSTN-208ENST00000438008 SYNJ2O15056 1496 aa30.79■■■□□ 2.52
NCSTN-208ENST00000438008 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
NCSTN-208ENST00000438008 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
NCSTN-208ENST00000438008 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
NCSTN-208ENST00000438008 CLASP1Q7Z460 1538 aa30.58■■■□□ 2.49
NCSTN-208ENST00000438008 ARHGEF11O15085 1522 aa30.57■■■□□ 2.49
NCSTN-208ENST00000438008 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
NCSTN-208ENST00000438008 KIF27Q86VH2 1401 aa30.57■■■□□ 2.48
NCSTN-208ENST00000438008 RIMBP3CA6NJZ7 1639 aa30.56■■■□□ 2.48
NCSTN-208ENST00000438008 RIMBP3BA6NNM3 1639 aa30.56■■■□□ 2.48
NCSTN-208ENST00000438008 RIMBP3Q9UFD9 1639 aa30.56■■■□□ 2.48
NCSTN-208ENST00000438008 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
NCSTN-208ENST00000438008 IGF1RP08069 1367 aa30.49■■■□□ 2.47
NCSTN-208ENST00000438008 NUP160Q12769 1436 aa30.47■■■□□ 2.47
NCSTN-208ENST00000438008 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
NCSTN-208ENST00000438008 CUL7Q14999 1698 aa30.34■■■□□ 2.45
NCSTN-208ENST00000438008 ARAP1Q96P48 1450 aa30.33■■■□□ 2.45
NCSTN-208ENST00000438008 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
NCSTN-208ENST00000438008 CARMIL1Q5VZK9 1371 aa30.29■■■□□ 2.44
NCSTN-208ENST00000438008 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
NCSTN-208ENST00000438008 SHROOM2Q13796 1616 aa30.21■■■□□ 2.43
NCSTN-208ENST00000438008 JPH4Q96JJ6 628 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms