RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
UBA52-202ENST00000442744 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
UBA52-202ENST00000442744 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
UBA52-202ENST00000442744 MYT1Q01538 1121 aa19.57■□□□□ 0.72
UBA52-202ENST00000442744 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
UBA52-202ENST00000442744 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
UBA52-202ENST00000442744 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
UBA52-202ENST00000442744 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
UBA52-202ENST00000442744 APLP2Q06481 763 aa19.23■□□□□ 0.67
UBA52-202ENST00000442744 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
UBA52-202ENST00000442744 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
UBA52-202ENST00000442744 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
UBA52-202ENST00000442744 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
UBA52-202ENST00000442744 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
UBA52-202ENST00000442744 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
UBA52-202ENST00000442744 ARXQ96QS3 562 aa18.5■□□□□ 0.55
UBA52-202ENST00000442744 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
UBA52-202ENST00000442744 KCNA4P22459 653 aa18.35■□□□□ 0.53
UBA52-202ENST00000442744 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
UBA52-202ENST00000442744 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
UBA52-202ENST00000442744 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
UBA52-202ENST00000442744 TULP1O00294 542 aaPredicted RBP18.08■□□□□ 0.48
UBA52-202ENST00000442744 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
UBA52-202ENST00000442744 HOMEZQ8IX15 550 aa17.91■□□□□ 0.46
UBA52-202ENST00000442744 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
UBA52-202ENST00000442744 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.43
UBA52-202ENST00000442744 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
UBA52-202ENST00000442744 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
UBA52-202ENST00000442744 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
UBA52-202ENST00000442744 BCANQ96GW7 911 aa17.56■□□□□ 0.4
UBA52-202ENST00000442744 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
UBA52-202ENST00000442744 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
UBA52-202ENST00000442744 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
UBA52-202ENST00000442744 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
UBA52-202ENST00000442744 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
UBA52-202ENST00000442744 C14orf37Q86TY3 774 aa17.14■□□□□ 0.33
UBA52-202ENST00000442744 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
UBA52-202ENST00000442744 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
UBA52-202ENST00000442744 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
UBA52-202ENST00000442744 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.3
UBA52-202ENST00000442744 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
UBA52-202ENST00000442744 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
UBA52-202ENST00000442744 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
UBA52-202ENST00000442744 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
UBA52-202ENST00000442744 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
UBA52-202ENST00000442744 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
UBA52-202ENST00000442744 PDIA4P13667 645 aaKnown RBP16.8■□□□□ 0.28
UBA52-202ENST00000442744 HRCP23327 699 aa16.66■□□□□ 0.26
UBA52-202ENST00000442744 UBE2Q2Q8WVN8 375 aa16.62■□□□□ 0.25
UBA52-202ENST00000442744 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
UBA52-202ENST00000442744 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
UBA52-202ENST00000442744 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
UBA52-202ENST00000442744 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
UBA52-202ENST00000442744 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
UBA52-202ENST00000442744 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
UBA52-202ENST00000442744 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
UBA52-202ENST00000442744 PDE4CQ08493 712 aa16.47■□□□□ 0.23
UBA52-202ENST00000442744 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
UBA52-202ENST00000442744 ZBTB22O15209 634 aa16.41■□□□□ 0.22
UBA52-202ENST00000442744 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
UBA52-202ENST00000442744 FBLN2P98095 1184 aa16.35■□□□□ 0.21
UBA52-202ENST00000442744 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
UBA52-202ENST00000442744 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
UBA52-202ENST00000442744 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
UBA52-202ENST00000442744 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
UBA52-202ENST00000442744 BRD2P25440 801 aaKnown RBP16.29■□□□□ 0.2
UBA52-202ENST00000442744 ABCC9O60706 1549 aa16.29■□□□□ 0.2
UBA52-202ENST00000442744 NEFLP07196 543 aa16.27■□□□□ 0.19
UBA52-202ENST00000442744 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
UBA52-202ENST00000442744 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
UBA52-202ENST00000442744 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
UBA52-202ENST00000442744 IGSF3O75054 1194 aa16.22■□□□□ 0.19
UBA52-202ENST00000442744 FKBP8Q14318 412 aa16.18■□□□□ 0.18
UBA52-202ENST00000442744 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
UBA52-202ENST00000442744 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
UBA52-202ENST00000442744 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
UBA52-202ENST00000442744 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
UBA52-202ENST00000442744 CFAP44Q96MT7 982 aa15.96■□□□□ 0.15
UBA52-202ENST00000442744 HMGB1P09429 215 aaKnown RBP15.93■□□□□ 0.14
UBA52-202ENST00000442744 FGD1P98174 961 aa15.93■□□□□ 0.14
UBA52-202ENST00000442744 ADRA2BP18089 450 aa15.91■□□□□ 0.14
UBA52-202ENST00000442744 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
UBA52-202ENST00000442744 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
UBA52-202ENST00000442744 NACADO15069 1562 aa15.8■□□□□ 0.12
UBA52-202ENST00000442744 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
UBA52-202ENST00000442744 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.12
UBA52-202ENST00000442744 PUS7Q96PZ0 661 aaKnown RBP15.77■□□□□ 0.11
UBA52-202ENST00000442744 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
UBA52-202ENST00000442744 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
UBA52-202ENST00000442744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.75■□□□□ 0.11
UBA52-202ENST00000442744 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
UBA52-202ENST00000442744 NBR1Q14596 966 aa15.69■□□□□ 0.1
UBA52-202ENST00000442744 ARID3AQ99856 593 aa15.68■□□□□ 0.1
UBA52-202ENST00000442744 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBA52-202ENST00000442744 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
UBA52-202ENST00000442744 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
UBA52-202ENST00000442744 NECTIN2Q92692 538 aa15.63■□□□□ 0.09
UBA52-202ENST00000442744 PAXIP1Q6ZW49 1069 aaPredicted RBP15.6■□□□□ 0.09
UBA52-202ENST00000442744 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
UBA52-202ENST00000442744 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms