RNA–Protein interactions for RNA: ENST00000335756.8

CENPA-202, Transcript of centromere protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPA, Length 1,452 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-202ENST00000335756 NISCHQ9Y2I1 1504 aa45.49■■■■■ 4.87
CENPA-202ENST00000335756 CCDC180Q9P1Z9 1646 aa40.31■■■■■ 4.04
CENPA-202ENST00000335756 ABCC9O60706 1549 aa39.27■■■■□ 3.88
CENPA-202ENST00000335756 DCAF8L2P0C7V8 631 aa37.98■■■■□ 3.67
CENPA-202ENST00000335756 ZCCHC6Q5VYS8 1495 aaKnown RBP37.92■■■■□ 3.66
CENPA-202ENST00000335756 NACADO15069 1562 aa37.87■■■■□ 3.65
CENPA-202ENST00000335756 RB1CC1Q8TDY2 1594 aa37.86■■■■□ 3.65
CENPA-202ENST00000335756 MYO15BQ96JP2 1530 aa37.71■■■■□ 3.63
CENPA-202ENST00000335756 DCAF1Q9Y4B6 1507 aa37.64■■■■□ 3.62
CENPA-202ENST00000335756 UNC13AQ9UPW8 1703 aa36.97■■■■□ 3.51
CENPA-202ENST00000335756 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
CENPA-202ENST00000335756 PABPN1Q86U42 306 aaKnown RBP eCLIP36.75■■■■□ 3.47
CENPA-202ENST00000335756 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
CENPA-202ENST00000335756 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
CENPA-202ENST00000335756 DNAJC5BQ9UF47 199 aa35.85■■■■□ 3.33
CENPA-202ENST00000335756 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
CENPA-202ENST00000335756 CC2D2AQ9P2K1 1620 aa35.52■■■■□ 3.28
CENPA-202ENST00000335756 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
CENPA-202ENST00000335756 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
CENPA-202ENST00000335756 SMARCA4P51532 1647 aa35.23■■■■□ 3.23
CENPA-202ENST00000335756 MROH2BQ7Z745 1585 aa35.05■■■■□ 3.2
CENPA-202ENST00000335756 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
CENPA-202ENST00000335756 SMARCA2P51531 1590 aa34.97■■■■□ 3.19
CENPA-202ENST00000335756 NCAPD3P42695 1498 aa34.95■■■■□ 3.19
CENPA-202ENST00000335756 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
CENPA-202ENST00000335756 HMGXB3Q12766 1538 aa34.78■■■■□ 3.16
CENPA-202ENST00000335756 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
CENPA-202ENST00000335756 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
CENPA-202ENST00000335756 WIZO95785 1651 aa34.69■■■■□ 3.14
CENPA-202ENST00000335756 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
CENPA-202ENST00000335756 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.05
CENPA-202ENST00000335756 NESP48681 1621 aa34.04■■■■□ 3.04
CENPA-202ENST00000335756 LAMC3Q9Y6N6 1575 aa33.99■■■■□ 3.03
CENPA-202ENST00000335756 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
CENPA-202ENST00000335756 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
CENPA-202ENST00000335756 ERCC6Q03468 1493 aa33.84■■■■□ 3.01
CENPA-202ENST00000335756 CFTRP13569 1480 aa33.79■■■■□ 3
CENPA-202ENST00000335756 PDS5BQ9NTI5 1447 aa33.78■■■■□ 3
CENPA-202ENST00000335756 KIF21AQ7Z4S6 1674 aa33.63■■■□□ 2.97
CENPA-202ENST00000335756 FANCD2Q9BXW9 1451 aa33.56■■■□□ 2.96
CENPA-202ENST00000335756 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
CENPA-202ENST00000335756 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
CENPA-202ENST00000335756 THOC2Q8NI27 1593 aaKnown RBP33.45■■■□□ 2.95
CENPA-202ENST00000335756 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.94
CENPA-202ENST00000335756 CUX2O14529 1486 aa33.38■■■□□ 2.93
CENPA-202ENST00000335756 WDR62O43379 1518 aa33.27■■■□□ 2.92
CENPA-202ENST00000335756 URB2Q14146 1524 aaKnown RBP33.19■■■□□ 2.9
CENPA-202ENST00000335756 ABCC8Q09428 1581 aa33.07■■■□□ 2.88
CENPA-202ENST00000335756 TOPBP1Q92547 1522 aa33.04■■■□□ 2.88
CENPA-202ENST00000335756 DNMBPQ6XZF7 1577 aa33.01■■■□□ 2.88
CENPA-202ENST00000335756 CUX1P39880 1505 aa32.86■■■□□ 2.85
CENPA-202ENST00000335756 IFT140Q96RY7 1462 aa32.79■■■□□ 2.84
CENPA-202ENST00000335756 POLA1P09884 1462 aaPredicted RBP32.78■■■□□ 2.84
CENPA-202ENST00000335756 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.84
CENPA-202ENST00000335756 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
CENPA-202ENST00000335756 SOGA1O94964 1423 aa32.67■■■□□ 2.82
CENPA-202ENST00000335756 TOP2BQ02880 1626 aa32.65■■■□□ 2.82
CENPA-202ENST00000335756 TARBP1Q13395 1621 aaKnown RBP32.65■■■□□ 2.82
CENPA-202ENST00000335756 SYNJ1O43426 1573 aa32.64■■■□□ 2.82
CENPA-202ENST00000335756 RAD54L2Q9Y4B4 1467 aa32.64■■■□□ 2.82
CENPA-202ENST00000335756 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
CENPA-202ENST00000335756 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
CENPA-202ENST00000335756 EIF4G3O43432 1585 aaKnown RBP32.48■■■□□ 2.79
CENPA-202ENST00000335756 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.791e-6■■■■□ 22.7
CENPA-202ENST00000335756 TDRD9Q8NDG6 1382 aaKnown RBP32.45■■■□□ 2.79
CENPA-202ENST00000335756 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
CENPA-202ENST00000335756 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
CENPA-202ENST00000335756 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
CENPA-202ENST00000335756 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.75
CENPA-202ENST00000335756 GRIN2BQ13224 1484 aa32.25■■■□□ 2.75
CENPA-202ENST00000335756 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
CENPA-202ENST00000335756 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
CENPA-202ENST00000335756 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
CENPA-202ENST00000335756 DNAJC5Q9H3Z4 198 aa32.13■■■□□ 2.73
CENPA-202ENST00000335756 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
CENPA-202ENST00000335756 OSCARQ8IYS5 282 aa32.09■■■□□ 2.73
CENPA-202ENST00000335756 FBLN2P98095 1184 aa32.08■■■□□ 2.73
CENPA-202ENST00000335756 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
CENPA-202ENST00000335756 ERICH3Q5RHP9 1530 aa32.04■■■□□ 2.72
CENPA-202ENST00000335756 CHD1O14646 1710 aa32.02■■■□□ 2.72
CENPA-202ENST00000335756 CHMP7Q8WUX9 453 aaPredicted RBP32.02■■■□□ 2.72
CENPA-202ENST00000335756 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
CENPA-202ENST00000335756 ADAMTS12P58397 1594 aa31.93■■■□□ 2.7
CENPA-202ENST00000335756 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
CENPA-202ENST00000335756 CHIC1Q5VXU3 224 aa31.91■■■□□ 2.7
CENPA-202ENST00000335756 IGF1RP08069 1367 aa31.91■■■□□ 2.7
CENPA-202ENST00000335756 RUSC2Q8N2Y8 1516 aa31.83■■■□□ 2.69
CENPA-202ENST00000335756 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
CENPA-202ENST00000335756 CUL7Q14999 1698 aa31.79■■■□□ 2.68
CENPA-202ENST00000335756 CARMIL1Q5VZK9 1371 aa31.73■■■□□ 2.67
CENPA-202ENST00000335756 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
CENPA-202ENST00000335756 NUP160Q12769 1436 aa31.67■■■□□ 2.66
CENPA-202ENST00000335756 CEP170Q5SW79 1584 aa31.64■■■□□ 2.66
CENPA-202ENST00000335756 EEA1Q15075 1411 aa31.59■■■□□ 2.65
CENPA-202ENST00000335756 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
CENPA-202ENST00000335756 CSRNP3Q8WYN3 585 aa31.55■■■□□ 2.64
CENPA-202ENST00000335756 ARHGEF11O15085 1522 aa31.52■■■□□ 2.64
CENPA-202ENST00000335756 FAM9AQ8IZU1 332 aaPredicted RBP31.5■■■□□ 2.63
CENPA-202ENST00000335756 RIMBP3CA6NJZ7 1639 aa31.5■■■□□ 2.63
CENPA-202ENST00000335756 RIMBP3BA6NNM3 1639 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms